RNA–Protein interactions for RNA: YCL005W

LDB16, Transcript of Protein of unknown function, yeastyeast

Gene LDB16, Length 771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LDB16YCL005W YHL049CP38722 271 aa6.77□□□□□ -1.33
LDB16YCL005W YEL075CP39972 122 aa6.77□□□□□ -1.33
LDB16YCL005W KAP123P40069 1113 aaKnown RBP6.77□□□□□ -1.33
LDB16YCL005W YER189WP40104 122 aa6.77□□□□□ -1.33
LDB16YCL005W YFL064CP43540 174 aa6.77□□□□□ -1.33
LDB16YCL005W PHO86P46956 311 aa6.77□□□□□ -1.33
LDB16YCL005W EEB1Q02891 456 aa6.77□□□□□ -1.33
LDB16YCL005W ATG16Q03818 150 aa6.77□□□□□ -1.33
LDB16YCL005W URH1Q04179 340 aa6.77□□□□□ -1.33
LDB16YCL005W ERV41Q04651 352 aa6.77□□□□□ -1.33
LDB16YCL005W YDR222WQ04925 415 aa6.77□□□□□ -1.33
LDB16YCL005W NOP6Q07623 225 aaKnown RBP6.77□□□□□ -1.33
LDB16YCL005W PUF3Q07807 879 aaKnown RBP RIP-Chip data6.77□□□□□ -1.33not detected
LDB16YCL005W APL5Q08951 932 aaKnown RBP6.77□□□□□ -1.33
LDB16YCL005W SPO21Q12411 609 aa6.77□□□□□ -1.33
LDB16YCL005W STB3Q12427 513 aa6.77□□□□□ -1.33
LDB16YCL005W RMP1Q12530 201 aa6.77□□□□□ -1.33
LDB16YCL005W YBL111CQ3E7Y5 667 aa6.77□□□□□ -1.33
LDB16YCL005W ECM3Q99252 613 aa6.77□□□□□ -1.33
LDB16YCL005W YER152CP10356 443 aa6.76□□□□□ -1.33
LDB16YCL005W RPL4AP10664 362 aaKnown RBP6.76□□□□□ -1.33
LDB16YCL005W VMA4P22203 233 aaKnown RBP6.76□□□□□ -1.33
LDB16YCL005W PRR1P28708 518 aa6.76□□□□□ -1.33
LDB16YCL005W SAK1P38990 1142 aa6.76□□□□□ -1.33
LDB16YCL005W SAH1P39954 449 aaKnown RBP6.76□□□□□ -1.33
LDB16YCL005W LCP5P40079 357 aaPredicted RBP6.76□□□□□ -1.33
LDB16YCL005W SAD1P43589 448 aa6.76□□□□□ -1.33
LDB16YCL005W BRO1P48582 844 aa6.76□□□□□ -1.33
LDB16YCL005W RPL4BP49626 362 aaKnown RBP6.76□□□□□ -1.33
LDB16YCL005W CWC21Q03375 135 aaKnown RBP6.76□□□□□ -1.33
LDB16YCL005W BSC2Q05611 235 aa6.76□□□□□ -1.33
LDB16YCL005W AIM41Q12032 185 aa6.76□□□□□ -1.33
LDB16YCL005W RIO1Q12196 484 aaKnown RBP6.76□□□□□ -1.33
LDB16YCL005W SUT2Q12286 268 aa6.76□□□□□ -1.33
LDB16YCL005W YOR131CQ12486 218 aa6.76□□□□□ -1.33
LDB16YCL005W GAL10P04397 699 aa6.75□□□□□ -1.33
LDB16YCL005W PHO4P07270 312 aaKnown RBP6.75□□□□□ -1.33
LDB16YCL005W GLN3P18494 730 aa6.75□□□□□ -1.33
LDB16YCL005W ADE2P21264 571 aaKnown RBP6.75□□□□□ -1.33
LDB16YCL005W DIT1P21623 536 aa6.75□□□□□ -1.33
LDB16YCL005W EFB1P32471 206 aaKnown RBP6.75□□□□□ -1.33
LDB16YCL005W UBC6P33296 250 aaPredicted RBP6.75□□□□□ -1.33
LDB16YCL005W BUD2P33314 1104 aa6.75□□□□□ -1.33
LDB16YCL005W DUR3P33413 735 aa6.75□□□□□ -1.33
LDB16YCL005W YHR054CP38780 354 aa6.75□□□□□ -1.33
LDB16YCL005W AIM46P38885 310 aa6.75□□□□□ -1.33
LDB16YCL005W ALD5P40047 520 aaKnown RBP6.75□□□□□ -1.33
LDB16YCL005W LAM5P43560 674 aa6.75□□□□□ -1.33
LDB16YCL005W MIC19P43594 170 aa6.75□□□□□ -1.33
LDB16YCL005W NCS6P53088 359 aa6.75□□□□□ -1.33
LDB16YCL005W NAM8Q00539 523 aaKnown RBP6.75□□□□□ -1.33
LDB16YCL005W DOT1Q04089 582 aaKnown RBP6.75□□□□□ -1.33
LDB16YCL005W TY1A-MR1Q04215 440 aa6.75□□□□□ -1.33
LDB16YCL005W YLR455WQ06188 304 aa6.75□□□□□ -1.33
LDB16YCL005W RRP15Q06511 250 aaPredicted RBP6.75□□□□□ -1.33
LDB16YCL005W YKL068W-AQ3E826 78 aa6.75□□□□□ -1.33
LDB16YCL005W COX4P04037 155 aa6.74□□□□□ -1.33
LDB16YCL005W GYP6P32806 458 aa6.74□□□□□ -1.33
LDB16YCL005W YBL055CP34220 418 aaPredicted RBP6.74□□□□□ -1.33
LDB16YCL005W CIN4P39110 191 aa6.74□□□□□ -1.33
LDB16YCL005W AIM21P40563 679 aa6.74□□□□□ -1.33
LDB16YCL005W ALT1P52893 592 aa6.74□□□□□ -1.33
LDB16YCL005W HOP2P53187 214 aa6.74□□□□□ -1.33
LDB16YCL005W DUS1P53759 423 aaKnown RBP6.74□□□□□ -1.33
LDB16YCL005W ALG11P53954 548 aaKnown RBP6.74□□□□□ -1.33
LDB16YCL005W MTG1Q03151 367 aaPredicted RBP6.74□□□□□ -1.33
LDB16YCL005W HEH2Q03281 663 aa6.74□□□□□ -1.33
LDB16YCL005W VPS72Q03388 795 aa6.74□□□□□ -1.33
LDB16YCL005W YMR265CQ03508 461 aaKnown RBP6.74□□□□□ -1.33
LDB16YCL005W PUS1Q12211 544 aaKnown RBP6.74□□□□□ -1.33
LDB16YCL005W BI2P03873 423 aa6.73□□□□□ -1.33
LDB16YCL005W BI4P03879 638 aa6.73□□□□□ -1.33
LDB16YCL005W ADE3P07245 946 aaKnown RBP6.73□□□□□ -1.33
LDB16YCL005W ABD1P32783 436 aaPredicted RBP6.73□□□□□ -1.33
LDB16YCL005W RPT1P33299 467 aaKnown RBP6.73□□□□□ -1.33
LDB16YCL005W MUD2P36084 527 aaKnown RBP6.73□□□□□ -1.33
LDB16YCL005W LAS1P36146 502 aaPredicted RBP6.73□□□□□ -1.33
LDB16YCL005W NOP4P37838 685 aaKnown RBP6.73□□□□□ -1.33
LDB16YCL005W SPP381P38282 291 aaPredicted RBP6.73□□□□□ -1.33
LDB16YCL005W CBR1P38626 284 aaKnown RBP6.73□□□□□ -1.33
LDB16YCL005W YAP1801P38856 637 aa6.73□□□□□ -1.33
LDB16YCL005W PMC1P38929 1173 aaPredicted RBP6.73□□□□□ -1.33
LDB16YCL005W YIL165CP40446 119 aa6.73□□□□□ -1.33
LDB16YCL005W ASG1P40467 964 aa6.73□□□□□ -1.33
LDB16YCL005W YIR007WP40566 764 aa6.73□□□□□ -1.33
LDB16YCL005W AZR1P50080 613 aa6.73□□□□□ -1.33
LDB16YCL005W YGR035CP53222 116 aa6.73□□□□□ -1.33
LDB16YCL005W YNL134CP53912 376 aaKnown RBP6.73□□□□□ -1.33
LDB16YCL005W GPD1Q00055 391 aaKnown RBP6.73□□□□□ -1.33
LDB16YCL005W MUK1Q02866 612 aa6.73□□□□□ -1.33
LDB16YCL005W YMR187CQ03236 431 aa6.73□□□□□ -1.33
LDB16YCL005W GYL1Q04322 720 aa6.73□□□□□ -1.33
LDB16YCL005W TDA9Q04545 1251 aa6.73□□□□□ -1.33
LDB16YCL005W MDM20Q12387 796 aaKnown RBP6.73□□□□□ -1.33
LDB16YCL005W BI3Q9ZZW7 517 aa6.73□□□□□ -1.33
LDB16YCL005W JIP3O13555 125 aa6.72□□□□□ -1.33
LDB16YCL005W ADE4P04046 510 aaKnown RBP6.72□□□□□ -1.33
LDB16YCL005W PMS1P14242 873 aa6.72□□□□□ -1.33
LDB16YCL005W NAB2P32505 525 aaKnown RBP RIP-Chip data6.72□□□□□ -1.33not detected
LDB16YCL005W SEG2P34250 1132 aa6.72□□□□□ -1.33
Retrieved 100 of 5,963 RNA–protein pairs in 18.4 ms