RNA–Protein interactions for RNA: ENST00000641891.1

PHGDH-229, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,175 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-229ENST00000641891 WTIPA6NIX2 430 aaPredicted RBP19.9■□□□□ 0.78
PHGDH-229ENST00000641891 CKAP2LQ8IYA6 745 aa19.9■□□□□ 0.78
PHGDH-229ENST00000641891 ARMT1Q9H993 441 aa19.9■□□□□ 0.78
PHGDH-229ENST00000641891 ZNF652Q9Y2D9 606 aa19.9■□□□□ 0.78
PHGDH-229ENST00000641891 NEDD4P46934 1319 aa19.9■□□□□ 0.78
PHGDH-229ENST00000641891 MAP3K12Q12852 859 aa19.9■□□□□ 0.78
PHGDH-229ENST00000641891 MAP3K11Q16584 847 aa19.9■□□□□ 0.78
PHGDH-229ENST00000641891 CFAP45Q9UL16 551 aa19.9■□□□□ 0.78
PHGDH-229ENST00000641891 TAF1P21675 1872 aa19.89■□□□□ 0.77
PHGDH-229ENST00000641891 B4E1Z4 1266 aa19.89■□□□□ 0.77
PHGDH-229ENST00000641891 TOM1O60784 492 aa19.89■□□□□ 0.77
PHGDH-229ENST00000641891 MSNP26038 577 aaKnown RBP19.89■□□□□ 0.77
PHGDH-229ENST00000641891 TRDNQ13061 729 aa19.89■□□□□ 0.77
PHGDH-229ENST00000641891 BICDL1Q6ZP65 573 aa19.89■□□□□ 0.77
PHGDH-229ENST00000641891 USP28Q96RU2 1077 aa19.89■□□□□ 0.77
PHGDH-229ENST00000641891 SENP2Q9HC62 589 aa19.89■□□□□ 0.77
PHGDH-229ENST00000641891 NOL7Q9UMY1 257 aaKnown RBP19.89■□□□□ 0.77
PHGDH-229ENST00000641891 IQSEC3Q9UPP2 1182 aaPredicted RBP19.89■□□□□ 0.77
PHGDH-229ENST00000641891 BCL9LQ86UU0 1499 aa19.89■□□□□ 0.77
PHGDH-229ENST00000641891 TNMDQ9H2S6 317 aa19.88■□□□□ 0.77
PHGDH-229ENST00000641891 WDR19Q8NEZ3 1342 aa19.88■□□□□ 0.77
PHGDH-229ENST00000641891 C4AP0C0L4 1744 aa19.88■□□□□ 0.77
PHGDH-229ENST00000641891 C4BP0C0L5 1744 aa19.88■□□□□ 0.77
PHGDH-229ENST00000641891 CCDC192P0DO97 292 aa19.88■□□□□ 0.77
PHGDH-229ENST00000641891 NGLY1Q96IV0 654 aa19.88■□□□□ 0.77
PHGDH-229ENST00000641891 CLSTN2Q9H4D0 955 aa19.88■□□□□ 0.77
PHGDH-229ENST00000641891 GJB4Q9NTQ9 266 aa19.88■□□□□ 0.77
PHGDH-229ENST00000641891 CCDC39Q9UFE4 941 aa19.88■□□□□ 0.77
PHGDH-229ENST00000641891 TACC3Q9Y6A5 838 aa19.88■□□□□ 0.77
PHGDH-229ENST00000641891 CASZ1Q86V15 1759 aa19.87■□□□□ 0.77
PHGDH-229ENST00000641891 PRKAB2O43741 272 aa19.87■□□□□ 0.77
PHGDH-229ENST00000641891 CTDSPL2Q05D32 466 aa19.87■□□□□ 0.77
PHGDH-229ENST00000641891 MPNDQ8N594 471 aa19.87■□□□□ 0.77
PHGDH-229ENST00000641891 SH2B2O14492 632 aaPredicted RBP19.87■□□□□ 0.77
PHGDH-229ENST00000641891 RXRAP19793 462 aa19.87■□□□□ 0.77
PHGDH-229ENST00000641891 IFNL3Q8IZI9 196 aa19.87■□□□□ 0.77
PHGDH-229ENST00000641891 LCORLQ8N3X6 602 aa19.87■□□□□ 0.77
PHGDH-229ENST00000641891 DDX19AQ9NUU7 478 aaKnown RBP19.87■□□□□ 0.77
PHGDH-229ENST00000641891 ORC3Q9UBD5 711 aaPredicted RBP19.87■□□□□ 0.77
PHGDH-229ENST00000641891 ANGEL1Q9UNK9 670 aaKnown RBP19.87■□□□□ 0.77
PHGDH-229ENST00000641891 MRVI1Q9Y6F6 885 aa19.87■□□□□ 0.77
PHGDH-229ENST00000641891 PATL2C9JE40 543 aaKnown RBP19.86■□□□□ 0.77
PHGDH-229ENST00000641891 ADCY5O95622 1261 aa19.86■□□□□ 0.77
PHGDH-229ENST00000641891 TYRO3Q06418 890 aa19.86■□□□□ 0.77
PHGDH-229ENST00000641891 CLEC4GQ6UXB4 293 aa19.86■□□□□ 0.77
PHGDH-229ENST00000641891 RCOR1Q9UKL0 485 aa19.86■□□□□ 0.77
PHGDH-229ENST00000641891 CPLX1O14810 134 aa19.85■□□□□ 0.77
PHGDH-229ENST00000641891 AP5Z1O43299 807 aa19.85■□□□□ 0.77
PHGDH-229ENST00000641891 PTMAP06454 111 aaKnown RBP19.85■□□□□ 0.77
PHGDH-229ENST00000641891 VPS72Q15906 364 aa19.85■□□□□ 0.77
PHGDH-229ENST00000641891 TBC1D9BQ66K14 1250 aa19.85■□□□□ 0.77
PHGDH-229ENST00000641891 CHMP4CQ96CF2 233 aa19.85■□□□□ 0.77
PHGDH-229ENST00000641891 C8orf76Q96K31 380 aa19.85■□□□□ 0.77
PHGDH-229ENST00000641891 CDC5LQ99459 802 aaKnown RBP19.85■□□□□ 0.77
PHGDH-229ENST00000641891 NAPBQ9H115 298 aa19.85■□□□□ 0.77
PHGDH-229ENST00000641891 ZKSCAN5Q9Y2L8 839 aa19.85■□□□□ 0.77
PHGDH-229ENST00000641891 A0A1B0GUL6 1792 aa19.85■□□□□ 0.77
PHGDH-229ENST00000641891 ZNF831Q5JPB2 1677 aa19.85■□□□□ 0.77
PHGDH-229ENST00000641891 GSG1L2A8MUP6 293 aa19.85■□□□□ 0.77
PHGDH-229ENST00000641891 KDM4AO75164 1064 aa19.85■□□□□ 0.77
PHGDH-229ENST00000641891 GYG1P46976 350 aa19.85■□□□□ 0.77
PHGDH-229ENST00000641891 ALX1Q15699 326 aa19.85■□□□□ 0.77
PHGDH-229ENST00000641891 MIGA1Q8NAN2 632 aa19.85■□□□□ 0.77
PHGDH-229ENST00000641891 GOLPH3LQ9H4A5 285 aa19.85■□□□□ 0.77
PHGDH-229ENST00000641891 BCL2L12Q9HB09 334 aa19.85■□□□□ 0.77
PHGDH-229ENST00000641891 DHX16O60231 1041 aaKnown RBP19.84■□□□□ 0.77
PHGDH-229ENST00000641891 PLCB2Q00722 1185 aa19.84■□□□□ 0.77
PHGDH-229ENST00000641891 FAM182BQ5T319 152 aa19.84■□□□□ 0.77
PHGDH-229ENST00000641891 ANKRD18AQ8IVF6 992 aa19.84■□□□□ 0.77
PHGDH-229ENST00000641891 KLHL34Q8N239 644 aa19.84■□□□□ 0.77
PHGDH-229ENST00000641891 SRP68Q9UHB9 627 aaKnown RBP19.84■□□□□ 0.77
PHGDH-229ENST00000641891 SCN7AQ01118 1682 aa19.84■□□□□ 0.77
PHGDH-229ENST00000641891 RBM43Q6ZSC3 357 aaKnown RBP19.84■□□□□ 0.77
PHGDH-229ENST00000641891 CCDC144CPQ8IYA2 1237 aa19.84■□□□□ 0.77
PHGDH-229ENST00000641891 ZNF396Q96N95 335 aaPredicted RBP19.84■□□□□ 0.77
PHGDH-229ENST00000641891 LRP2BPQ9P2M1 347 aa19.84■□□□□ 0.77
PHGDH-229ENST00000641891 ZMYM6O95789 1325 aa19.83■□□□□ 0.77
PHGDH-229ENST00000641891 COL1A1P02452 1464 aaPredicted RBP19.83■□□□□ 0.77
PHGDH-229ENST00000641891 CCAR1Q8IX12 1150 aaKnown RBP19.83■□□□□ 0.77
PHGDH-229ENST00000641891 AIFM3Q96NN9 605 aa19.83■□□□□ 0.77
PHGDH-229ENST00000641891 NAP1L5Q96NT1 182 aaPredicted RBP19.83■□□□□ 0.77
PHGDH-229ENST00000641891 MYL10Q9BUA6 226 aa19.83■□□□□ 0.77
PHGDH-229ENST00000641891 CNTNAP4Q9C0A0 1308 aa19.83■□□□□ 0.76
PHGDH-229ENST00000641891 CDC27P30260 824 aa19.83■□□□□ 0.76
PHGDH-229ENST00000641891 METAP2P50579 478 aaKnown RBP eCLIP19.83■□□□□ 0.761e-6■■□□□ 12.1
PHGDH-229ENST00000641891 APOA5Q6Q788 366 aa19.83■□□□□ 0.76
PHGDH-229ENST00000641891 ADGRA1Q86SQ6 560 aa19.83■□□□□ 0.76
PHGDH-229ENST00000641891 STK11IPQ8N1F8 1099 aa19.83■□□□□ 0.76
PHGDH-229ENST00000641891 FBXO18Q8NFZ0 1043 aa19.83■□□□□ 0.76
PHGDH-229ENST00000641891 IGDCC4Q8TDY8 1250 aa19.83■□□□□ 0.76
PHGDH-229ENST00000641891 TAOK2Q9UL54 1235 aa19.83■□□□□ 0.76
PHGDH-229ENST00000641891 SLC4A4Q9Y6R1 1079 aa19.83■□□□□ 0.76
PHGDH-229ENST00000641891 CHD4Q14839 1912 aa19.82■□□□□ 0.76
PHGDH-229ENST00000641891 POLR3DP05423 398 aaPredicted RBP19.82■□□□□ 0.76
PHGDH-229ENST00000641891 SF3B3Q15393 1217 aaKnown RBP19.82■□□□□ 0.76
PHGDH-229ENST00000641891 ANO6Q4KMQ2 910 aa19.82■□□□□ 0.76
PHGDH-229ENST00000641891 MICU3Q86XE3 530 aa19.82■□□□□ 0.76
PHGDH-229ENST00000641891 CELF1Q92879 486 aaKnown RBP19.82■□□□□ 0.76
PHGDH-229ENST00000641891 LY9Q9HBG7 655 aa19.82■□□□□ 0.76
PHGDH-229ENST00000641891 TIAM2Q8IVF5 1701 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms