RNA–Protein interactions for RNA: ENST00000641523.1

CASC19-238, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,558 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-238ENST00000641523 HIRIP3Q9BW71 556 aaPredicted RBP8.74□□□□□ -1.01
CASC19-238ENST00000641523 RUBCNLQ9H714 662 aa8.74□□□□□ -1.01
CASC19-238ENST00000641523 KIAA1210Q9ULL0 1709 aa8.74□□□□□ -1.01
CASC19-238ENST00000641523 BCL9LQ86UU0 1499 aa8.74□□□□□ -1.01
CASC19-238ENST00000641523 PMFBP1Q8TBY8 1022 aa8.73□□□□□ -1.01
CASC19-238ENST00000641523 CEP63Q96MT8 703 aa8.73□□□□□ -1.01
CASC19-238ENST00000641523 MRS2Q9HD23 443 aa8.73□□□□□ -1.01
CASC19-238ENST00000641523 FOXD3Q9UJU5 478 aaPredicted RBP8.73□□□□□ -1.01
CASC19-238ENST00000641523 GJA3Q9Y6H8 435 aa8.73□□□□□ -1.01
CASC19-238ENST00000641523 USP32Q8NFA0 1604 aa8.73□□□□□ -1.01
CASC19-238ENST00000641523 SLIT2O94813 1529 aa8.73□□□□□ -1.01
CASC19-238ENST00000641523 SORBS3O60504 671 aa8.73□□□□□ -1.01
CASC19-238ENST00000641523 GRNP28799 593 aaKnown RBP8.73□□□□□ -1.01
CASC19-238ENST00000641523 GAS2L1Q99501 681 aaPredicted RBP8.73□□□□□ -1.01
CASC19-238ENST00000641523 DNMT3LQ9UJW3 386 aa8.73□□□□□ -1.01
CASC19-238ENST00000641523 KCNMB2Q9Y691 235 aa8.73□□□□□ -1.01
CASC19-238ENST00000641523 MARF1Q9Y4F3 1742 aaKnown RBP8.72□□□□□ -1.01
CASC19-238ENST00000641523 TNFRSF21O75509 655 aa8.72□□□□□ -1.01
CASC19-238ENST00000641523 NEFLP07196 543 aa8.72□□□□□ -1.01
CASC19-238ENST00000641523 TYRO3Q06418 890 aa8.72□□□□□ -1.01
CASC19-238ENST00000641523 USPL1Q5W0Q7 1092 aa8.72□□□□□ -1.01
CASC19-238ENST00000641523 VTI1BQ9UEU0 232 aa8.72□□□□□ -1.01
CASC19-238ENST00000641523 FNDC3AQ9Y2H6 1198 aaKnown RBP8.72□□□□□ -1.01
CASC19-238ENST00000641523 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.72□□□□□ -1.01
CASC19-238ENST00000641523 PRR36Q9H6K5 1346 aa8.72□□□□□ -1.01
CASC19-238ENST00000641523 ATP7BP35670 1465 aa8.71□□□□□ -1.01
CASC19-238ENST00000641523 ARHGEF28Q8N1W1 1705 aaKnown RBP8.71□□□□□ -1.01
CASC19-238ENST00000641523 CPNE3O75131 537 aaKnown RBP8.71□□□□□ -1.02
CASC19-238ENST00000641523 F11P03951 625 aa8.71□□□□□ -1.02
CASC19-238ENST00000641523 SMCPP49901 116 aaPredicted RBP8.71□□□□□ -1.02
CASC19-238ENST00000641523 VPS72Q15906 364 aa8.71□□□□□ -1.02
CASC19-238ENST00000641523 XKR5Q6UX68 686 aa8.71□□□□□ -1.02
CASC19-238ENST00000641523 ZNF438Q7Z4V0 828 aa8.71□□□□□ -1.02
CASC19-238ENST00000641523 DNAJC25Q9H1X3 360 aa8.71□□□□□ -1.02
CASC19-238ENST00000641523 CRISPLD1Q9H336 500 aa8.71□□□□□ -1.02
CASC19-238ENST00000641523 ELP3Q9H9T3 547 aa8.71□□□□□ -1.02
CASC19-238ENST00000641523 ITSN1Q15811 1721 aa8.71□□□□□ -1.02
CASC19-238ENST00000641523 RGPD8O14715 1765 aaPredicted RBP8.7□□□□□ -1.02
CASC19-238ENST00000641523 AXIN1O15169 862 aa8.7□□□□□ -1.02
CASC19-238ENST00000641523 DGAT1O75907 488 aa8.7□□□□□ -1.02
CASC19-238ENST00000641523 RGS20O76081 388 aa8.7□□□□□ -1.02
CASC19-238ENST00000641523 CTC1Q2NKJ3 1217 aa8.7□□□□□ -1.02
CASC19-238ENST00000641523 PKDCCQ504Y2 493 aa8.7□□□□□ -1.02
CASC19-238ENST00000641523 C9orf131Q5VYM1 1079 aa8.7□□□□□ -1.02
CASC19-238ENST00000641523 TMEM87AQ8NBN3 555 aa8.7□□□□□ -1.02
CASC19-238ENST00000641523 CDK19Q9BWU1 502 aa8.7□□□□□ -1.02
CASC19-238ENST00000641523 TMEM63CQ9P1W3 806 aa8.7□□□□□ -1.02
CASC19-238ENST00000641523 DYRK1BQ9Y463 629 aa8.7□□□□□ -1.02
CASC19-238ENST00000641523 CENPJQ9HC77 1338 aaPredicted RBP8.7□□□□□ -1.02
CASC19-238ENST00000641523 GNA15P30679 374 aa8.69□□□□□ -1.02
CASC19-238ENST00000641523 FBF1Q8TES7 1133 aa8.69□□□□□ -1.02
CASC19-238ENST00000641523 ZCCHC2Q9C0B9 1178 aaKnown RBP8.69□□□□□ -1.02
CASC19-238ENST00000641523 NWD2Q9ULI1 1742 aa8.69□□□□□ -1.02
CASC19-238ENST00000641523 POLR3AO14802 1390 aaPredicted RBP8.69□□□□□ -1.02
CASC19-238ENST00000641523 BRD4O60885 1362 aaPredicted RBP8.69□□□□□ -1.02
CASC19-238ENST00000641523 RALGAPBQ86X10 1494 aa8.69□□□□□ -1.02
CASC19-238ENST00000641523 EP400Q96L91 3159 aa8.69□□□□□ -1.02
CASC19-238ENST00000641523 SCAMP3O14828 347 aaKnown RBP8.69□□□□□ -1.02
CASC19-238ENST00000641523 GFRA3O60609 400 aa8.69□□□□□ -1.02
CASC19-238ENST00000641523 HDLBPQ00341 1268 aaKnown RBP8.69□□□□□ -1.02
CASC19-238ENST00000641523 PDE12Q6L8Q7 609 aaKnown RBP8.69□□□□□ -1.02
CASC19-238ENST00000641523 PI16Q6UXB8 463 aa8.69□□□□□ -1.02
CASC19-238ENST00000641523 FAM177A1Q8N128 213 aaPredicted RBP8.69□□□□□ -1.02
CASC19-238ENST00000641523 PGBD3Q8N328 593 aa8.69□□□□□ -1.02
CASC19-238ENST00000641523 ZFYVE28Q9HCC9 887 aa8.69□□□□□ -1.02
CASC19-238ENST00000641523 TRPM3Q9HCF6 1732 aaPredicted RBP8.68□□□□□ -1.02
CASC19-238ENST00000641523 SENP3-EIF4A1A0A087X0R7 540 aa8.68□□□□□ -1.02
CASC19-238ENST00000641523 SOBPA7XYQ1 873 aa8.68□□□□□ -1.02
CASC19-238ENST00000641523 XYLBO75191 536 aa8.68□□□□□ -1.02
CASC19-238ENST00000641523 EPB42P16452 691 aa8.68□□□□□ -1.02
CASC19-238ENST00000641523 IRS1P35568 1242 aa8.68□□□□□ -1.02
CASC19-238ENST00000641523 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.68□□□□□ -1.02
CASC19-238ENST00000641523 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.68□□□□□ -1.02
CASC19-238ENST00000641523 SNX29Q8TEQ0 813 aa8.68□□□□□ -1.02
CASC19-238ENST00000641523 BRD7Q9NPI1 651 aa8.68□□□□□ -1.02
CASC19-238ENST00000641523 FAM83GA6ND36 823 aa8.67□□□□□ -1.02
CASC19-238ENST00000641523 ROCK2O75116 1388 aaKnown RBP8.67□□□□□ -1.02
CASC19-238ENST00000641523 PHACTR2O75167 634 aa8.67□□□□□ -1.02
CASC19-238ENST00000641523 POLR3DP05423 398 aaPredicted RBP8.67□□□□□ -1.02
CASC19-238ENST00000641523 ACEP12821 1306 aa8.67□□□□□ -1.02
CASC19-238ENST00000641523 EVC2Q86UK5 1308 aa8.67□□□□□ -1.02
CASC19-238ENST00000641523 EPS8L3Q8TE67 593 aaKnown RBP8.67□□□□□ -1.02
CASC19-238ENST00000641523 CCDC74AQ96AQ1 378 aa8.67□□□□□ -1.02
CASC19-238ENST00000641523 ALS2Q96Q42 1657 aa8.67□□□□□ -1.02
CASC19-238ENST00000641523 ABCA3Q99758 1704 aa8.67□□□□□ -1.02
CASC19-238ENST00000641523 PRDM11Q9NQV5 511 aa8.67□□□□□ -1.02
CASC19-238ENST00000641523 AK5Q9Y6K8 562 aa8.67□□□□□ -1.02
CASC19-238ENST00000641523 MAN1A2O60476 641 aa8.66□□□□□ -1.02
CASC19-238ENST00000641523 NBPF8Q3BBV2 869 aa8.66□□□□□ -1.02
CASC19-238ENST00000641523 NLRP8Q86W28 1048 aa8.66□□□□□ -1.02
CASC19-238ENST00000641523 BTG4Q9NY30 223 aa8.66□□□□□ -1.02
CASC19-238ENST00000641523 CNTN3Q9P232 1028 aa8.66□□□□□ -1.02
CASC19-238ENST00000641523 COL14A1Q05707 1796 aaKnown RBP8.66□□□□□ -1.02
CASC19-238ENST00000641523 PLCH1Q4KWH8 1693 aa8.66□□□□□ -1.02
CASC19-238ENST00000641523 GLI3P10071 1580 aa8.66□□□□□ -1.02
CASC19-238ENST00000641523 BLMP54132 1417 aaPredicted RBP8.66□□□□□ -1.02
CASC19-238ENST00000641523 ST8SIA5O15466 376 aa8.65□□□□□ -1.02
CASC19-238ENST00000641523 ERCC5P28715 1186 aaPredicted RBP8.65□□□□□ -1.02
CASC19-238ENST00000641523 EFHC2Q5JST6 749 aa8.65□□□□□ -1.02
CASC19-238ENST00000641523 RIPOR1Q6ZS17 1223 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms