RNA–Protein interactions for RNA: ENST00000640131.1

SPIN3-236, Transcript of spindlin family member 3, humanhuman

TSL 1 (best)

Gene SPIN3, Length 2,938 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-236ENST00000640131 ATP6V1AP38606 617 aa14.4□□□□□ -0.1
SPIN3-236ENST00000640131 MUM1L1Q5H9M0 696 aa14.4□□□□□ -0.1
SPIN3-236ENST00000640131 ZMYM1Q5SVZ6 1142 aa14.4□□□□□ -0.1
SPIN3-236ENST00000640131 TSPY26PQ9H489 355 aa14.4□□□□□ -0.1
SPIN3-236ENST00000640131 HMG20BQ9P0W2 317 aa14.4□□□□□ -0.1
SPIN3-236ENST00000640131 DENND2AQ9ULE3 1009 aa14.4□□□□□ -0.1
SPIN3-236ENST00000640131 KIF1CO43896 1103 aaKnown RBP14.4□□□□□ -0.1
SPIN3-236ENST00000640131 IDH1O75874 414 aaKnown RBP14.4□□□□□ -0.1
SPIN3-236ENST00000640131 SCRN1Q12765 414 aa14.4□□□□□ -0.1
SPIN3-236ENST00000640131 KIAA1524Q8TCG1 905 aa14.4□□□□□ -0.1
SPIN3-236ENST00000640131 ROBO1Q9Y6N7 1651 aa14.4□□□□□ -0.1
SPIN3-236ENST00000640131 MYO5AQ9Y4I1 1855 aaKnown RBP14.4□□□□□ -0.1
SPIN3-236ENST00000640131 LAMA4Q16363 1823 aa14.4□□□□□ -0.11
SPIN3-236ENST00000640131 E7EWF7 191 aa14.39□□□□□ -0.11
SPIN3-236ENST00000640131 CTSWP56202 376 aa14.39□□□□□ -0.11
SPIN3-236ENST00000640131 DDB1Q16531 1140 aa14.39□□□□□ -0.11
SPIN3-236ENST00000640131 USPL1Q5W0Q7 1092 aa14.39□□□□□ -0.11
SPIN3-236ENST00000640131 ZNF397Q8NF99 534 aaPredicted RBP14.39□□□□□ -0.11
SPIN3-236ENST00000640131 SEC31BQ9NQW1 1179 aa14.39□□□□□ -0.11
SPIN3-236ENST00000640131 LCMT1Q9UIC8 334 aa14.39□□□□□ -0.11
SPIN3-236ENST00000640131 IQSEC3Q9UPP2 1182 aaPredicted RBP14.39□□□□□ -0.11
SPIN3-236ENST00000640131 BCL9O00512 1426 aa14.39□□□□□ -0.11
SPIN3-236ENST00000640131 MCAMP43121 646 aa14.39□□□□□ -0.11
SPIN3-236ENST00000640131 FAM182BQ5T319 152 aa14.39□□□□□ -0.11
SPIN3-236ENST00000640131 TTC6Q86TZ1 520 aa14.39□□□□□ -0.11
SPIN3-236ENST00000640131 FTOQ9C0B1 505 aaKnown RBP eCLIP14.39□□□□□ -0.11
SPIN3-236ENST00000640131 ANKRD1Q15327 319 aa14.38□□□□□ -0.11
SPIN3-236ENST00000640131 KRBA2Q6ZNG9 492 aa14.38□□□□□ -0.11
SPIN3-236ENST00000640131 NEK11Q8NG66 645 aa14.38□□□□□ -0.11
SPIN3-236ENST00000640131 FAM212AQ96EL1 285 aa14.38□□□□□ -0.11
SPIN3-236ENST00000640131 TEX13AQ9BXU3 409 aaPredicted RBP14.38□□□□□ -0.11
SPIN3-236ENST00000640131 DEF6Q9H4E7 631 aa14.38□□□□□ -0.11
SPIN3-236ENST00000640131 SH3TC1Q8TE82 1336 aa14.38□□□□□ -0.11
SPIN3-236ENST00000640131 ANKRD18BA2A2Z9 1011 aa14.38□□□□□ -0.11
SPIN3-236ENST00000640131 PHKA1P46020 1223 aa14.38□□□□□ -0.11
SPIN3-236ENST00000640131 KMT5BQ4FZB7 885 aa14.38□□□□□ -0.11
SPIN3-236ENST00000640131 H3BQV1 296 aa14.38□□□□□ -0.11
SPIN3-236ENST00000640131 CIAO1O76071 339 aa14.38□□□□□ -0.11
SPIN3-236ENST00000640131 KRT32Q14532 448 aa14.38□□□□□ -0.11
SPIN3-236ENST00000640131 IFFO2Q5TF58 517 aa14.38□□□□□ -0.11
SPIN3-236ENST00000640131 BICDL1Q6ZP65 573 aa14.38□□□□□ -0.11
SPIN3-236ENST00000640131 CCDC91Q7Z6B0 441 aa14.38□□□□□ -0.11
SPIN3-236ENST00000640131 MNS1Q8NEH6 495 aa14.38□□□□□ -0.11
SPIN3-236ENST00000640131 GTF3C6Q969F1 213 aa14.38□□□□□ -0.11
SPIN3-236ENST00000640131 USP25Q9UHP3 1055 aa14.38□□□□□ -0.11
SPIN3-236ENST00000640131 PALLDQ8WX93 1383 aa14.37□□□□□ -0.11
SPIN3-236ENST00000640131 JCADQ9P266 1359 aa14.37□□□□□ -0.11
SPIN3-236ENST00000640131 FAM184AQ8NB25 1140 aa14.37□□□□□ -0.11
SPIN3-236ENST00000640131 SYAP1Q96A49 352 aaPredicted RBP14.37□□□□□ -0.11
SPIN3-236ENST00000640131 PYCARDQ9ULZ3 195 aa14.37□□□□□ -0.11
SPIN3-236ENST00000640131 RIC1Q4ADV7 1423 aa14.37□□□□□ -0.11
SPIN3-236ENST00000640131 SMTNL1A8MU46 457 aa14.37□□□□□ -0.11
SPIN3-236ENST00000640131 ATP2B1P20020 1258 aa14.37□□□□□ -0.11
SPIN3-236ENST00000640131 UBE2HP62256 183 aa14.37□□□□□ -0.11
SPIN3-236ENST00000640131 TSGA10IPQ3SY00 556 aa14.37□□□□□ -0.11
SPIN3-236ENST00000640131 SUSD4Q5VX71 490 aa14.37□□□□□ -0.11
SPIN3-236ENST00000640131 OTUD7BQ6GQQ9 843 aa14.37□□□□□ -0.11
SPIN3-236ENST00000640131 TXLNBQ8N3L3 684 aa14.37□□□□□ -0.11
SPIN3-236ENST00000640131 CCDC24Q8N4L8 307 aa14.37□□□□□ -0.11
SPIN3-236ENST00000640131 MARCH10Q8NA82 808 aaPredicted RBP14.37□□□□□ -0.11
SPIN3-236ENST00000640131 NKX2-3Q8TAU0 364 aa14.37□□□□□ -0.11
SPIN3-236ENST00000640131 MED4Q9NPJ6 270 aa14.37□□□□□ -0.11
SPIN3-236ENST00000640131 HELLSQ9NRZ9 838 aa14.37□□□□□ -0.11
SPIN3-236ENST00000640131 ATP6V1DQ9Y5K8 247 aa14.37□□□□□ -0.11
SPIN3-236ENST00000640131 NUP98P52948 1817 aa14.36□□□□□ -0.11
SPIN3-236ENST00000640131 WTIPA6NIX2 430 aaPredicted RBP14.36□□□□□ -0.11
SPIN3-236ENST00000640131 ADCY5O95622 1261 aa14.36□□□□□ -0.11
SPIN3-236ENST00000640131 CSF1RP07333 972 aa14.36□□□□□ -0.11
SPIN3-236ENST00000640131 LIG1P18858 919 aa14.36□□□□□ -0.11
SPIN3-236ENST00000640131 RBM6P78332 1123 aaKnown RBP14.36□□□□□ -0.11
SPIN3-236ENST00000640131 GPR108Q9NPR9 543 aa14.36□□□□□ -0.11
SPIN3-236ENST00000640131 INCENPQ9NQS7 918 aa14.36□□□□□ -0.11
SPIN3-236ENST00000640131 AKAP2Q9Y2D5 859 aa14.36□□□□□ -0.11
SPIN3-236ENST00000640131 RIPOR2Q9Y4F9 1068 aa14.36□□□□□ -0.11
SPIN3-236ENST00000640131 EP400Q96L91 3159 aa14.36□□□□□ -0.11
SPIN3-236ENST00000640131 FOXP2O15409 715 aa14.36□□□□□ -0.11
SPIN3-236ENST00000640131 RXRAP19793 462 aa14.36□□□□□ -0.11
SPIN3-236ENST00000640131 CRKLP46109 303 aaKnown RBP14.36□□□□□ -0.11
SPIN3-236ENST00000640131 ITPK1Q13572 414 aa14.36□□□□□ -0.11
SPIN3-236ENST00000640131 SLC9C2Q5TAH2 1124 aa14.36□□□□□ -0.11
SPIN3-236ENST00000640131 PTF1AQ7RTS3 328 aa14.36□□□□□ -0.11
SPIN3-236ENST00000640131 GJB4Q9NTQ9 266 aa14.36□□□□□ -0.11
SPIN3-236ENST00000640131 DOT1LQ8TEK3 1739 aa14.36□□□□□ -0.11
SPIN3-236ENST00000640131 CCDC189A1A4V9 331 aa14.35□□□□□ -0.11
SPIN3-236ENST00000640131 FGAP02671 866 aa14.35□□□□□ -0.11
SPIN3-236ENST00000640131 DHX32Q7L7V1 743 aaKnown RBP14.35□□□□□ -0.11
SPIN3-236ENST00000640131 CKAP2LQ8IYA6 745 aa14.35□□□□□ -0.11
SPIN3-236ENST00000640131 PIH1D3Q9NQM4 214 aaKnown RBP14.35□□□□□ -0.11
SPIN3-236ENST00000640131 GPAA1O43292 621 aa14.35□□□□□ -0.11
SPIN3-236ENST00000640131 KRT85P78386 507 aa14.35□□□□□ -0.11
SPIN3-236ENST00000640131 E2F4Q16254 413 aa14.35□□□□□ -0.11
SPIN3-236ENST00000640131 TTC31Q49AM3 519 aaPredicted RBP14.35□□□□□ -0.11
SPIN3-236ENST00000640131 CCDC183Q5T5S1 534 aa14.35□□□□□ -0.11
SPIN3-236ENST00000640131 FAM98CQ17RN3 349 aaKnown RBP14.35□□□□□ -0.11
SPIN3-236ENST00000640131 WWC3Q9ULE0 1092 aa14.35□□□□□ -0.11
SPIN3-236ENST00000640131 PLEKHG2Q9H7P9 1386 aa14.34□□□□□ -0.11
SPIN3-236ENST00000640131 DISP2A7MBM2 1401 aa14.34□□□□□ -0.11
SPIN3-236ENST00000640131 PTPDC1A2A3K4 754 aa14.34□□□□□ -0.11
SPIN3-236ENST00000640131 TRIM28Q13263 835 aaKnown RBP14.34□□□□□ -0.11
SPIN3-236ENST00000640131 SPATA32Q96LK8 384 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms