RNA–Protein interactions for RNA: ENST00000638488.1

GFAP-228, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 2,641 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-228ENST00000638488 USP8P40818 1118 aa13.99□□□□□ -0.17
GFAP-228ENST00000638488 TDO2P48775 406 aa13.99□□□□□ -0.17
GFAP-228ENST00000638488 APOBRQ0VD83 1088 aa13.99□□□□□ -0.17
GFAP-228ENST00000638488 ERC1Q8IUD2 1116 aa13.99□□□□□ -0.17
GFAP-228ENST00000638488 HNRNPLLQ8WVV9 542 aaKnown RBP13.99□□□□□ -0.17
GFAP-228ENST00000638488 ECHDC1Q9NTX5 307 aa13.99□□□□□ -0.17
GFAP-228ENST00000638488 TLR7Q9NYK1 1049 aaKnown RBP13.99□□□□□ -0.17
GFAP-228ENST00000638488 EIF5P55010 431 aaKnown RBP13.98□□□□□ -0.17
GFAP-228ENST00000638488 ARMCX5Q6P1M9 558 aa13.98□□□□□ -0.17
GFAP-228ENST00000638488 CEP57L1Q8IYX8 460 aa13.98□□□□□ -0.17
GFAP-228ENST00000638488 RASEFQ8IZ41 740 aa13.98□□□□□ -0.17
GFAP-228ENST00000638488 GPATCH3Q96I76 525 aa13.98□□□□□ -0.17
GFAP-228ENST00000638488 PDRG1Q9NUG6 133 aa13.98□□□□□ -0.17
GFAP-228ENST00000638488 VPS18Q9P253 973 aa13.98□□□□□ -0.17
GFAP-228ENST00000638488 LMTK3Q96Q04 1460 aa13.98□□□□□ -0.17
GFAP-228ENST00000638488 SOS2Q07890 1332 aaPredicted RBP13.98□□□□□ -0.17
GFAP-228ENST00000638488 IL2RBP14784 551 aa13.98□□□□□ -0.17
GFAP-228ENST00000638488 ST3GAL1Q11201 340 aa13.98□□□□□ -0.17
GFAP-228ENST00000638488 FCHSD1Q86WN1 690 aa13.98□□□□□ -0.17
GFAP-228ENST00000638488 EGFL6Q8IUX8 553 aa13.98□□□□□ -0.17
GFAP-228ENST00000638488 EAF2Q96CJ1 260 aaPredicted RBP13.98□□□□□ -0.17
GFAP-228ENST00000638488 PARD6BQ9BYG5 372 aa13.98□□□□□ -0.17
GFAP-228ENST00000638488 NAT10Q9H0A0 1025 aaKnown RBP13.98□□□□□ -0.17
GFAP-228ENST00000638488 A0A087WZG4 1122 aa13.97□□□□□ -0.17
GFAP-228ENST00000638488 A1BGP04217 495 aa13.97□□□□□ -0.17
GFAP-228ENST00000638488 PGBD1Q96JS3 809 aa13.97□□□□□ -0.17
GFAP-228ENST00000638488 CCDC9Q9Y3X0 531 aaKnown RBP13.97□□□□□ -0.17
GFAP-228ENST00000638488 UTYO14607 1347 aa13.97□□□□□ -0.17
GFAP-228ENST00000638488 PPFIA4O75335 1185 aa13.97□□□□□ -0.17
GFAP-228ENST00000638488 HSP90AB3PQ58FF7 597 aa13.97□□□□□ -0.17
GFAP-228ENST00000638488 LRP10Q7Z4F1 713 aa13.97□□□□□ -0.17
GFAP-228ENST00000638488 BOLA2Q9H3K6 86 aa13.97□□□□□ -0.17
GFAP-228ENST00000638488 MAP3K9P80192 1104 aa13.96□□□□□ -0.17
GFAP-228ENST00000638488 FOXR1Q6PIV2 292 aa13.96□□□□□ -0.17
GFAP-228ENST00000638488 GOLGA1Q92805 767 aa13.96□□□□□ -0.17
GFAP-228ENST00000638488 LARP6Q9BRS8 491 aaKnown RBP13.96□□□□□ -0.17
GFAP-228ENST00000638488 ZSWIM6Q9HCJ5 1215 aa13.96□□□□□ -0.17
GFAP-228ENST00000638488 STRCQ7RTU9 1775 aa13.96□□□□□ -0.17
GFAP-228ENST00000638488 COL5A2P05997 1499 aaPredicted RBP13.96□□□□□ -0.17
GFAP-228ENST00000638488 TTLL7Q6ZT98 887 aa13.96□□□□□ -0.17
GFAP-228ENST00000638488 HDXQ7Z353 690 aa13.96□□□□□ -0.17
GFAP-228ENST00000638488 FERMT3Q86UX7 667 aa13.96□□□□□ -0.17
GFAP-228ENST00000638488 ZBTB3Q9H5J0 574 aa13.96□□□□□ -0.17
GFAP-228ENST00000638488 CYP46A1Q9Y6A2 500 aa13.96□□□□□ -0.17
GFAP-228ENST00000638488 NBPF26B4DH59 902 aa13.95□□□□□ -0.18
GFAP-228ENST00000638488 TXLNAP40222 546 aa13.95□□□□□ -0.18
GFAP-228ENST00000638488 PPP2R3AQ06190 1150 aa13.95□□□□□ -0.18
GFAP-228ENST00000638488 NBPF14Q5TI25 921 aa13.95□□□□□ -0.18
GFAP-228ENST00000638488 NBPF10Q6P3W6 841 aaKnown RBP13.95□□□□□ -0.18
GFAP-228ENST00000638488 LRRC31Q6UY01 552 aa13.95□□□□□ -0.18
GFAP-228ENST00000638488 NBPF15Q8N660 670 aa13.95□□□□□ -0.18
GFAP-228ENST00000638488 KCNB2Q92953 911 aa13.95□□□□□ -0.18
GFAP-228ENST00000638488 PKD1L3Q7Z443 1732 aa13.95□□□□□ -0.18
GFAP-228ENST00000638488 POTEB2H3BUK9 544 aa13.95□□□□□ -0.18
GFAP-228ENST00000638488 ME3Q16798 604 aa13.95□□□□□ -0.18
GFAP-228ENST00000638488 DNAJC21Q5F1R6 531 aaKnown RBP13.95□□□□□ -0.18
GFAP-228ENST00000638488 FAM173BQ6P4H8 233 aa13.95□□□□□ -0.18
GFAP-228ENST00000638488 SYTL4Q96C24 671 aaPredicted RBP13.95□□□□□ -0.18
GFAP-228ENST00000638488 MRFAP1Q9Y605 127 aa13.95□□□□□ -0.18
GFAP-228ENST00000638488 CCDC189A1A4V9 331 aa13.94□□□□□ -0.18
GFAP-228ENST00000638488 GOLGA6L9A6NEM1 432 aa13.94□□□□□ -0.18
GFAP-228ENST00000638488 USP5P45974 858 aa13.94□□□□□ -0.18
GFAP-228ENST00000638488 RAI14Q9P0K7 980 aa13.94□□□□□ -0.18
GFAP-228ENST00000638488 MRC1P22897 1456 aa13.94□□□□□ -0.18
GFAP-228ENST00000638488 FANCGO15287 622 aa13.94□□□□□ -0.18
GFAP-228ENST00000638488 ZSCAN12O43309 604 aa13.94□□□□□ -0.18
GFAP-228ENST00000638488 GNL2Q13823 731 aaKnown RBP13.94□□□□□ -0.18
GFAP-228ENST00000638488 GRIPAP1Q4V328 841 aa13.94□□□□□ -0.18
GFAP-228ENST00000638488 TMC6Q7Z403 805 aa13.94□□□□□ -0.18
GFAP-228ENST00000638488 AOPEPQ8N6M6 819 aa13.94□□□□□ -0.18
GFAP-228ENST00000638488 FAM71BQ8TC56 605 aa13.94□□□□□ -0.18
GFAP-228ENST00000638488 BPIFA3Q9BQP9 254 aa13.94□□□□□ -0.18
GFAP-228ENST00000638488 UTP14AQ9BVJ6 771 aaKnown RBP13.94□□□□□ -0.18
GFAP-228ENST00000638488 PDE11AQ9HCR9 933 aa13.94□□□□□ -0.18
GFAP-228ENST00000638488 A1CFQ9NQ94 594 aaKnown RBP13.94□□□□□ -0.18
GFAP-228ENST00000638488 CPA1P15085 419 aa13.94□□□□□ -0.18
GFAP-228ENST00000638488 NBPF20Q3BBV1 942 aa13.94□□□□□ -0.18
GFAP-228ENST00000638488 PLBD2Q8NHP8 589 aa13.94□□□□□ -0.18
GFAP-228ENST00000638488 STAG1Q8WVM7 1258 aa13.94□□□□□ -0.18
GFAP-228ENST00000638488 TFIP11Q9UBB9 837 aaKnown RBP13.94□□□□□ -0.18
GFAP-228ENST00000638488 AKAP2Q9Y2D5 859 aa13.94□□□□□ -0.18
GFAP-228ENST00000638488 USP42Q9H9J4 1324 aaKnown RBP13.93□□□□□ -0.18
GFAP-228ENST00000638488 SAMD1Q6SPF0 538 aaPredicted RBP13.93□□□□□ -0.18
GFAP-228ENST00000638488 EDC3Q96F86 508 aaKnown RBP13.93□□□□□ -0.18
GFAP-228ENST00000638488 EPC1Q9H2F5 836 aa13.93□□□□□ -0.18
GFAP-228ENST00000638488 NDUFB9Q9Y6M9 179 aa13.93□□□□□ -0.18
GFAP-228ENST00000638488 C21orf2O43822 256 aa13.93□□□□□ -0.18
GFAP-228ENST00000638488 TUBB4BP68371 445 aa13.93□□□□□ -0.18
GFAP-228ENST00000638488 PTH1RQ03431 593 aa13.93□□□□□ -0.18
GFAP-228ENST00000638488 TFCP2Q12800 502 aa13.93□□□□□ -0.18
GFAP-228ENST00000638488 BEND6Q5SZJ8 279 aaPredicted RBP13.93□□□□□ -0.18
GFAP-228ENST00000638488 FAM227BQ96M60 508 aa13.93□□□□□ -0.18
GFAP-228ENST00000638488 JAKMIP1Q96N16 626 aaKnown RBP13.93□□□□□ -0.18
GFAP-228ENST00000638488 BTG4Q9NY30 223 aa13.93□□□□□ -0.18
GFAP-228ENST00000638488 CFAP45Q9UL16 551 aa13.93□□□□□ -0.18
GFAP-228ENST00000638488 ABCC6O95255 1503 aa13.92□□□□□ -0.18
GFAP-228ENST00000638488 PATL2C9JE40 543 aaKnown RBP13.92□□□□□ -0.18
GFAP-228ENST00000638488 PPP1R12AO14974 1030 aaPredicted RBP13.92□□□□□ -0.18
GFAP-228ENST00000638488 ERLIN1O75477 346 aa13.92□□□□□ -0.18
GFAP-228ENST00000638488 CALRP27797 417 aaKnown RBP13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms