RNA–Protein interactions for RNA: ENST00000638409.1

SCARB2-209, Transcript of scavenger receptor class B member 2, humanhuman

Gene SCARB2, Length 2,753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-209ENST00000638409 SIRPGQ9P1W8 387 aa9.69□□□□□ -0.86
SCARB2-209ENST00000638409 USP21Q9UK80 565 aa9.69□□□□□ -0.86
SCARB2-209ENST00000638409 RTL1A6NKG5 1358 aa9.69□□□□□ -0.86
SCARB2-209ENST00000638409 LEMD3Q9Y2U8 911 aa9.69□□□□□ -0.86
SCARB2-209ENST00000638409 COMMD10Q9Y6G5 202 aa9.69□□□□□ -0.86
SCARB2-209ENST00000638409 BLMP54132 1417 aaPredicted RBP9.69□□□□□ -0.86
SCARB2-209ENST00000638409 ARPC5LQ9BPX5 153 aa9.69□□□□□ -0.86
SCARB2-209ENST00000638409 MTA3Q9BTC8 594 aa9.69□□□□□ -0.86
SCARB2-209ENST00000638409 BTG4Q9NY30 223 aa9.69□□□□□ -0.86
SCARB2-209ENST00000638409 SMG6Q86US8 1419 aaKnown RBP9.68□□□□□ -0.86
SCARB2-209ENST00000638409 SQSTM1Q13501 440 aa9.68□□□□□ -0.86
SCARB2-209ENST00000638409 COX20Q5RI15 118 aa9.68□□□□□ -0.86
SCARB2-209ENST00000638409 IP6K1Q92551 441 aa9.68□□□□□ -0.86
SCARB2-209ENST00000638409 ZNF512BQ96KM6 892 aaPredicted RBP9.68□□□□□ -0.86
SCARB2-209ENST00000638409 EFR3BQ9Y2G0 817 aa9.68□□□□□ -0.86
SCARB2-209ENST00000638409 KAT6BQ8WYB5 2073 aa9.68□□□□□ -0.86
SCARB2-209ENST00000638409 COL5A2P05997 1499 aaPredicted RBP9.68□□□□□ -0.86
SCARB2-209ENST00000638409 MAP2P11137 1827 aaKnown RBP9.68□□□□□ -0.86
SCARB2-209ENST00000638409 NFX1Q12986 1120 aaKnown RBP9.68□□□□□ -0.86
SCARB2-209ENST00000638409 CHRNA2Q15822 529 aa9.68□□□□□ -0.86
SCARB2-209ENST00000638409 VPS72Q15906 364 aa9.68□□□□□ -0.86
SCARB2-209ENST00000638409 TNS4Q8IZW8 715 aa9.68□□□□□ -0.86
SCARB2-209ENST00000638409 TRPC5Q9UL62 973 aaPredicted RBP9.68□□□□□ -0.86
SCARB2-209ENST00000638409 MAP3K19Q56UN5 1328 aa9.67□□□□□ -0.86
SCARB2-209ENST00000638409 RGPD5Q99666 1765 aa9.67□□□□□ -0.86
SCARB2-209ENST00000638409 PEAK1Q9H792 1746 aa9.67□□□□□ -0.86
SCARB2-209ENST00000638409 MORC1Q86VD1 984 aa9.67□□□□□ -0.86
SCARB2-209ENST00000638409 PNISRQ8TF01 805 aaKnown RBP9.67□□□□□ -0.86
SCARB2-209ENST00000638409 OSBPL7Q9BZF2 842 aa9.67□□□□□ -0.86
SCARB2-209ENST00000638409 STIM2Q9P246 746 aa9.67□□□□□ -0.86
SCARB2-209ENST00000638409 AXIN2Q9Y2T1 843 aa9.67□□□□□ -0.86
SCARB2-209ENST00000638409 NR1I2O75469 434 aa9.67□□□□□ -0.86
SCARB2-209ENST00000638409 DDX10Q13206 875 aaKnown RBP9.67□□□□□ -0.86
SCARB2-209ENST00000638409 C21orf62-AS1Q17RA5 79 aa9.67□□□□□ -0.86
SCARB2-209ENST00000638409 DALRD3Q5D0E6 543 aaKnown RBP9.67□□□□□ -0.86
SCARB2-209ENST00000638409 CELF2-AS1Q8N7Q2 184 aa9.67□□□□□ -0.86
SCARB2-209ENST00000638409 RASGRP4Q8TDF6 673 aa9.67□□□□□ -0.86
SCARB2-209ENST00000638409 KBTBD4Q9NVX7 518 aa9.67□□□□□ -0.86
SCARB2-209ENST00000638409 EIF4BP23588 611 aaKnown RBP9.66□□□□□ -0.86
SCARB2-209ENST00000638409 PPP4CP60510 307 aa9.66□□□□□ -0.86
SCARB2-209ENST00000638409 C10orf62Q5T681 223 aaPredicted RBP9.66□□□□□ -0.86
SCARB2-209ENST00000638409 PDXDC2PQ6P474 469 aa9.66□□□□□ -0.86
SCARB2-209ENST00000638409 TSPAN10Q9H1Z9 355 aaPredicted RBP9.66□□□□□ -0.86
SCARB2-209ENST00000638409 QTRT2Q9H974 415 aaKnown RBP9.66□□□□□ -0.86
SCARB2-209ENST00000638409 ZNF358Q9NW07 568 aa9.66□□□□□ -0.86
SCARB2-209ENST00000638409 LRFN2Q9ULH4 789 aa9.66□□□□□ -0.86
SCARB2-209ENST00000638409 FAM208AQ9UK61 1670 aaKnown RBP9.66□□□□□ -0.86
SCARB2-209ENST00000638409 HOXC9P31274 260 aa9.66□□□□□ -0.86
SCARB2-209ENST00000638409 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.66□□□□□ -0.86
SCARB2-209ENST00000638409 BSDC1Q9NW68 430 aaPredicted RBP9.66□□□□□ -0.86
SCARB2-209ENST00000638409 POLKQ9UBT6 870 aa9.66□□□□□ -0.86
SCARB2-209ENST00000638409 CDK12Q9NYV4 1490 aaPredicted RBP9.65□□□□□ -0.86
SCARB2-209ENST00000638409 FLT4P35916 1363 aa9.65□□□□□ -0.86
SCARB2-209ENST00000638409 POU3F3P20264 500 aaPredicted RBP9.65□□□□□ -0.86
SCARB2-209ENST00000638409 IGFBP4P22692 258 aa9.65□□□□□ -0.86
SCARB2-209ENST00000638409 FBLN1P23142 703 aa9.65□□□□□ -0.86
SCARB2-209ENST00000638409 DNM1Q05193 864 aaKnown RBP9.65□□□□□ -0.86
SCARB2-209ENST00000638409 POTEAQ6S8J7 498 aa9.65□□□□□ -0.86
SCARB2-209ENST00000638409 GEMIN8Q9NWZ8 242 aaKnown RBP9.65□□□□□ -0.86
SCARB2-209ENST00000638409 INSRP06213 1382 aa9.65□□□□□ -0.86
SCARB2-209ENST00000638409 A0A1W2PRU2 124 aa9.65□□□□□ -0.86
SCARB2-209ENST00000638409 VIL1P09327 827 aaKnown RBP9.65□□□□□ -0.86
SCARB2-209ENST00000638409 OS9Q13438 667 aaPredicted RBP9.65□□□□□ -0.86
SCARB2-209ENST00000638409 RRS1Q15050 365 aaKnown RBP9.65□□□□□ -0.86
SCARB2-209ENST00000638409 MORN1Q5T089 497 aa9.65□□□□□ -0.86
SCARB2-209ENST00000638409 TTC39BQ5VTQ0 682 aaPredicted RBP9.65□□□□□ -0.86
SCARB2-209ENST00000638409 ANAPC16Q96DE5 110 aa9.65□□□□□ -0.86
SCARB2-209ENST00000638409 APBA2Q99767 749 aa9.65□□□□□ -0.86
SCARB2-209ENST00000638409 SEPT9Q9UHD8 586 aaPredicted RBP9.65□□□□□ -0.86
SCARB2-209ENST00000638409 ATP8A1Q9Y2Q0 1164 aa9.65□□□□□ -0.86
SCARB2-209ENST00000638409 SPATA31A5Q5VU36 1347 aa9.65□□□□□ -0.87
SCARB2-209ENST00000638409 SPATA31A7Q8IWB4 1347 aa9.65□□□□□ -0.87
SCARB2-209ENST00000638409 WDR17Q8IZU2 1322 aa9.65□□□□□ -0.87
SCARB2-209ENST00000638409 GLI3P10071 1580 aa9.64□□□□□ -0.87
SCARB2-209ENST00000638409 RBM6P78332 1123 aaKnown RBP9.64□□□□□ -0.87
SCARB2-209ENST00000638409 EXOSC10Q01780 885 aaKnown RBP9.64□□□□□ -0.87
SCARB2-209ENST00000638409 TBCELQ5QJ74 424 aa9.64□□□□□ -0.87
SCARB2-209ENST00000638409 CC2D1BQ5T0F9 858 aaKnown RBP9.64□□□□□ -0.87
SCARB2-209ENST00000638409 IER5LQ5T953 404 aa9.64□□□□□ -0.87
SCARB2-209ENST00000638409 WDR78Q5VTH9 848 aa9.64□□□□□ -0.87
SCARB2-209ENST00000638409 ARHGAP9Q9BRR9 750 aa9.64□□□□□ -0.87
SCARB2-209ENST00000638409 GPSM3Q9Y4H4 160 aa9.64□□□□□ -0.87
SCARB2-209ENST00000638409 PARD3Q8TEW0 1356 aa9.64□□□□□ -0.87
SCARB2-209ENST00000638409 CRB1P82279 1406 aa9.64□□□□□ -0.87
SCARB2-209ENST00000638409 EIF1AYO14602 144 aaKnown RBP9.64□□□□□ -0.87
SCARB2-209ENST00000638409 TSPAN6O43657 245 aa9.64□□□□□ -0.87
SCARB2-209ENST00000638409 ALDH1L1O75891 902 aa9.64□□□□□ -0.87
SCARB2-209ENST00000638409 IRS1P35568 1242 aa9.64□□□□□ -0.87
SCARB2-209ENST00000638409 AMPHP49418 695 aa9.64□□□□□ -0.87
SCARB2-209ENST00000638409 C14orf80Q86SX3 495 aa9.64□□□□□ -0.87
SCARB2-209ENST00000638409 GJD3Q8N144 294 aa9.64□□□□□ -0.87
SCARB2-209ENST00000638409 PKNOX2Q96KN3 472 aa9.64□□□□□ -0.87
SCARB2-209ENST00000638409 MAP3K20Q9NYL2 800 aaKnown RBP9.64□□□□□ -0.87
SCARB2-209ENST00000638409 FBXO9Q9UK97 447 aaPredicted RBP9.64□□□□□ -0.87
SCARB2-209ENST00000638409 ERBB3P21860 1342 aa9.64□□□□□ -0.87
SCARB2-209ENST00000638409 A6NHS1 94 aa9.63□□□□□ -0.87
SCARB2-209ENST00000638409 NFE2Q16621 373 aaPredicted RBP9.63□□□□□ -0.87
SCARB2-209ENST00000638409 CCSAPQ6IQ19 270 aaPredicted RBP9.63□□□□□ -0.87
SCARB2-209ENST00000638409 DZIP3Q86Y13 1208 aaKnown RBP9.63□□□□□ -0.87
SCARB2-209ENST00000638409 SCYL1Q96KG9 808 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms