RNA–Protein interactions for RNA: ENST00000638251.1

RTTN-211, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 4,801 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-211ENST00000638251 MBD3O95983 291 aa8.11□□□□□ -1.11
RTTN-211ENST00000638251 GJB2P29033 226 aa8.11□□□□□ -1.11
RTTN-211ENST00000638251 ZNF589Q86UQ0 364 aaPredicted RBP8.11□□□□□ -1.11
RTTN-211ENST00000638251 CCDC34Q96HJ3 373 aa8.11□□□□□ -1.11
RTTN-211ENST00000638251 GZF1Q9H116 711 aaPredicted RBP8.11□□□□□ -1.11
RTTN-211ENST00000638251 PIH1D3Q9NQM4 214 aaKnown RBP8.11□□□□□ -1.11
RTTN-211ENST00000638251 RPAP1Q9BWH6 1393 aaPredicted RBP8.11□□□□□ -1.11
RTTN-211ENST00000638251 SOGA3Q5TF21 947 aa8.11□□□□□ -1.11
RTTN-211ENST00000638251 HDAC9Q9UKV0 1011 aa8.11□□□□□ -1.11
RTTN-211ENST00000638251 GOLGA8AA7E2F4 631 aa8.11□□□□□ -1.11
RTTN-211ENST00000638251 HLA-DOAP06340 250 aa8.11□□□□□ -1.11
RTTN-211ENST00000638251 CATIPQ7Z7H3 387 aa8.11□□□□□ -1.11
RTTN-211ENST00000638251 WTAPQ15007 396 aa8.1□□□□□ -1.11
RTTN-211ENST00000638251 GRIPAP1Q4V328 841 aa8.1□□□□□ -1.11
RTTN-211ENST00000638251 TMEM87BQ96K49 555 aa8.1□□□□□ -1.11
RTTN-211ENST00000638251 E7EWF7 191 aa8.1□□□□□ -1.11
RTTN-211ENST00000638251 CYP2E1P05181 493 aaPredicted RBP8.1□□□□□ -1.11
RTTN-211ENST00000638251 METAP2P50579 478 aaKnown RBP eCLIP8.1□□□□□ -1.11
RTTN-211ENST00000638251 FOSBP53539 338 aa8.1□□□□□ -1.11
RTTN-211ENST00000638251 SLC15A2Q16348 729 aa8.1□□□□□ -1.11
RTTN-211ENST00000638251 PI16Q6UXB8 463 aa8.1□□□□□ -1.11
RTTN-211ENST00000638251 SP8Q8IXZ3 490 aa8.1□□□□□ -1.11
RTTN-211ENST00000638251 TNPO1Q92973 898 aaKnown RBP8.1□□□□□ -1.11
RTTN-211ENST00000638251 KLF18A0A0U1RQI7 1052 aa8.1□□□□□ -1.11
RTTN-211ENST00000638251 NECTIN1Q15223 517 aa8.1□□□□□ -1.11
RTTN-211ENST00000638251 PPP4R3BQ5MIZ7 849 aa8.1□□□□□ -1.11
RTTN-211ENST00000638251 ZSCAN29Q8IWY8 852 aaPredicted RBP8.1□□□□□ -1.11
RTTN-211ENST00000638251 OSBP2Q969R2 916 aa8.1□□□□□ -1.11
RTTN-211ENST00000638251 LARP6Q9BRS8 491 aaKnown RBP8.1□□□□□ -1.11
RTTN-211ENST00000638251 WWC3Q9ULE0 1092 aa8.1□□□□□ -1.11
RTTN-211ENST00000638251 JAG2Q9Y219 1238 aa8.1□□□□□ -1.11
RTTN-211ENST00000638251 PAPPAQ13219 1627 aa8.1□□□□□ -1.11
RTTN-211ENST00000638251 GOLGA6L3A6NEY3 463 aa8.1□□□□□ -1.11
RTTN-211ENST00000638251 TSPY2A6NKD2 308 aa8.1□□□□□ -1.11
RTTN-211ENST00000638251 STX6O43752 255 aa8.1□□□□□ -1.11
RTTN-211ENST00000638251 KRT85P78386 507 aa8.1□□□□□ -1.11
RTTN-211ENST00000638251 CCDC125Q86Z20 511 aa8.1□□□□□ -1.11
RTTN-211ENST00000638251 IFNL3Q8IZI9 196 aa8.1□□□□□ -1.11
RTTN-211ENST00000638251 MCM9Q9NXL9 1143 aa8.1□□□□□ -1.11
RTTN-211ENST00000638251 TRAK2O60296 914 aa8.09□□□□□ -1.11
RTTN-211ENST00000638251 CRACR2BQ8N4Y2 399 aaPredicted RBP8.09□□□□□ -1.11
RTTN-211ENST00000638251 TCEANC2Q96MN5 208 aa8.09□□□□□ -1.11
RTTN-211ENST00000638251 LRRC4BQ9NT99 713 aa8.09□□□□□ -1.11
RTTN-211ENST00000638251 COL23A1Q86Y22 540 aaPredicted RBP8.09□□□□□ -1.11
RTTN-211ENST00000638251 CTCFLQ8NI51 663 aaPredicted RBP8.09□□□□□ -1.11
RTTN-211ENST00000638251 DDX11Q96FC9 970 aa8.09□□□□□ -1.11
RTTN-211ENST00000638251 COA1Q9GZY4 146 aa8.09□□□□□ -1.11
RTTN-211ENST00000638251 BCL2L12Q9HB09 334 aa8.09□□□□□ -1.11
RTTN-211ENST00000638251 AATFQ9NY61 560 aaKnown RBP eCLIP8.09□□□□□ -1.11
RTTN-211ENST00000638251 ARPP21Q9UBL0 812 aaPredicted RBP8.09□□□□□ -1.11
RTTN-211ENST00000638251 ITGB4P16144 1822 aa8.09□□□□□ -1.11
RTTN-211ENST00000638251 ZBTB43O43298 467 aa8.09□□□□□ -1.11
RTTN-211ENST00000638251 FGAP02671 866 aa8.09□□□□□ -1.11
RTTN-211ENST00000638251 FGFR2P21802 821 aa8.09□□□□□ -1.11
RTTN-211ENST00000638251 CCT2P78371 535 aaKnown RBP8.09□□□□□ -1.11
RTTN-211ENST00000638251 SSRP1Q08945 709 aaKnown RBP8.09□□□□□ -1.11
RTTN-211ENST00000638251 RAB3GAP1Q15042 981 aa8.09□□□□□ -1.11
RTTN-211ENST00000638251 MFSD14BQ5SR56 506 aa8.09□□□□□ -1.11
RTTN-211ENST00000638251 LLPHQ9BRT6 129 aaKnown RBP8.09□□□□□ -1.11
RTTN-211ENST00000638251 LRRC2Q9BYS8 371 aa8.09□□□□□ -1.11
RTTN-211ENST00000638251 PUS7LQ9H0K6 701 aaKnown RBP8.09□□□□□ -1.11
RTTN-211ENST00000638251 CFAP45Q9UL16 551 aa8.09□□□□□ -1.11
RTTN-211ENST00000638251 VIRMAQ69YN4 1812 aaKnown RBP8.09□□□□□ -1.11
RTTN-211ENST00000638251 F8W031 263 aaPredicted RBP8.09□□□□□ -1.12
RTTN-211ENST00000638251 PRPF40AO75400 957 aaKnown RBP8.09□□□□□ -1.12
RTTN-211ENST00000638251 CALM1P0DP23 149 aa8.09□□□□□ -1.12
RTTN-211ENST00000638251 CALM2P0DP24 149 aa8.09□□□□□ -1.12
RTTN-211ENST00000638251 CALM3P0DP25 149 aa8.09□□□□□ -1.12
RTTN-211ENST00000638251 PCP11498 1178 aaKnown RBP8.09□□□□□ -1.12
RTTN-211ENST00000638251 CPA1P15085 419 aa8.09□□□□□ -1.12
RTTN-211ENST00000638251 GSE1Q14687 1217 aa8.09□□□□□ -1.12
RTTN-211ENST00000638251 EZH2Q15910 746 aaKnown RBP8.09□□□□□ -1.12
RTTN-211ENST00000638251 UBR2Q8IWV8 1755 aa8.09□□□□□ -1.12
RTTN-211ENST00000638251 TEX11Q8IYF3 940 aa8.09□□□□□ -1.12
RTTN-211ENST00000638251 RASEFQ8IZ41 740 aa8.09□□□□□ -1.12
RTTN-211ENST00000638251 NECAB1Q8N987 351 aa8.09□□□□□ -1.12
RTTN-211ENST00000638251 FAM84BQ96KN1 310 aaPredicted RBP8.09□□□□□ -1.12
RTTN-211ENST00000638251 TOGARAM1Q9Y4F4 1720 aa8.09□□□□□ -1.12
RTTN-211ENST00000638251 MED23Q9ULK4 1368 aa8.08□□□□□ -1.12
RTTN-211ENST00000638251 RAD21O60216 631 aa8.08□□□□□ -1.12
RTTN-211ENST00000638251 KIF5BP33176 963 aa8.08□□□□□ -1.12
RTTN-211ENST00000638251 GPSM2P81274 684 aa8.08□□□□□ -1.12
RTTN-211ENST00000638251 IFIT1BQ5T764 474 aaKnown RBP8.08□□□□□ -1.12
RTTN-211ENST00000638251 OGFOD1Q8N543 542 aa8.08□□□□□ -1.12
RTTN-211ENST00000638251 SLC16A10Q8TF71 515 aa8.08□□□□□ -1.12
RTTN-211ENST00000638251 JDP2Q8WYK2 163 aa8.08□□□□□ -1.12
RTTN-211ENST00000638251 KAT14Q9H8E8 782 aa8.08□□□□□ -1.12
RTTN-211ENST00000638251 MYO1BO43795 1136 aa8.08□□□□□ -1.12
RTTN-211ENST00000638251 GTF2IP78347 998 aa8.08□□□□□ -1.12
RTTN-211ENST00000638251 PPARAQ07869 468 aa8.08□□□□□ -1.12
RTTN-211ENST00000638251 APOBRQ0VD83 1088 aa8.08□□□□□ -1.12
RTTN-211ENST00000638251 AKNAD1Q5T1N1 836 aa8.08□□□□□ -1.12
RTTN-211ENST00000638251 TTC6Q86TZ1 520 aa8.08□□□□□ -1.12
RTTN-211ENST00000638251 C8orf76Q96K31 380 aa8.08□□□□□ -1.12
RTTN-211ENST00000638251 ATP8A2Q9NTI2 1148 aa8.08□□□□□ -1.12
RTTN-211ENST00000638251 CYP21A2P08686 494 aa8.08□□□□□ -1.12
RTTN-211ENST00000638251 TSPY3P0CV98 308 aa8.08□□□□□ -1.12
RTTN-211ENST00000638251 TSPY8P0CW00 308 aa8.08□□□□□ -1.12
RTTN-211ENST00000638251 ZSCAN22P10073 491 aaPredicted RBP8.08□□□□□ -1.12
RTTN-211ENST00000638251 SCARF1Q14162 830 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms