RNA–Protein interactions for RNA: ENST00000637915.1

CTSD-213, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,982 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-213ENST00000637915 ALX1Q15699 326 aa19.48■□□□□ 0.71
CTSD-213ENST00000637915 CELF1Q92879 486 aaKnown RBP19.48■□□□□ 0.71
CTSD-213ENST00000637915 MINPP1Q9UNW1 487 aa19.48■□□□□ 0.71
CTSD-213ENST00000637915 UBE4AQ14139 1066 aa19.48■□□□□ 0.71
CTSD-213ENST00000637915 FAM43AQ8N2R8 423 aa19.48■□□□□ 0.71
CTSD-213ENST00000637915 CHMP4CQ96CF2 233 aa19.48■□□□□ 0.71
CTSD-213ENST00000637915 EPB41L4AQ9HCS5 686 aaPredicted RBP19.48■□□□□ 0.71
CTSD-213ENST00000637915 DENND2AQ9ULE3 1009 aa19.48■□□□□ 0.71
CTSD-213ENST00000637915 KIF3AQ9Y496 699 aa19.48■□□□□ 0.71
CTSD-213ENST00000637915 WTIPA6NIX2 430 aaPredicted RBP19.47■□□□□ 0.71
CTSD-213ENST00000637915 PATL2C9JE40 543 aaKnown RBP19.47■□□□□ 0.71
CTSD-213ENST00000637915 CCDC173Q0VFZ6 552 aa19.47■□□□□ 0.71
CTSD-213ENST00000637915 TRDNQ13061 729 aa19.47■□□□□ 0.71
CTSD-213ENST00000637915 NAA16Q6N069 864 aaPredicted RBP19.47■□□□□ 0.71
CTSD-213ENST00000637915 NBPF5PQ86XG9 351 aaPredicted RBP19.47■□□□□ 0.71
CTSD-213ENST00000637915 ARHGEF1Q92888 912 aaKnown RBP19.47■□□□□ 0.71
CTSD-213ENST00000637915 SCAND2PQ9GZW5 306 aaPredicted RBP19.47■□□□□ 0.71
CTSD-213ENST00000637915 ARMT1Q9H993 441 aa19.47■□□□□ 0.71
CTSD-213ENST00000637915 AFF2P51816 1311 aa19.47■□□□□ 0.71
CTSD-213ENST00000637915 KLF18A0A0U1RQI7 1052 aa19.46■□□□□ 0.71
CTSD-213ENST00000637915 GYG1P46976 350 aa19.46■□□□□ 0.71
CTSD-213ENST00000637915 IFNL3Q8IZI9 196 aa19.46■□□□□ 0.71
CTSD-213ENST00000637915 NKX2-3Q8TAU0 364 aa19.46■□□□□ 0.71
CTSD-213ENST00000637915 PPP1R9BQ96SB3 815 aa19.46■□□□□ 0.71
CTSD-213ENST00000637915 TSPY26PQ9H489 355 aa19.46■□□□□ 0.71
CTSD-213ENST00000637915 ZSCAN16Q9H4T2 348 aaPredicted RBP19.46■□□□□ 0.71
CTSD-213ENST00000637915 MYH15Q9Y2K3 1946 aa19.46■□□□□ 0.71
CTSD-213ENST00000637915 COL1A1P02452 1464 aaPredicted RBP19.46■□□□□ 0.71
CTSD-213ENST00000637915 ANP32BQ92688 251 aaKnown RBP19.46■□□□□ 0.71
CTSD-213ENST00000637915 IQSEC3Q9UPP2 1182 aaPredicted RBP19.46■□□□□ 0.71
CTSD-213ENST00000637915 HPS5Q9UPZ3 1129 aa19.46■□□□□ 0.71
CTSD-213ENST00000637915 CARMIL3Q8ND23 1372 aa19.46■□□□□ 0.7
CTSD-213ENST00000637915 TIAM2Q8IVF5 1701 aa19.45■□□□□ 0.7
CTSD-213ENST00000637915 GOLGA8BA8MQT2 603 aa19.45■□□□□ 0.7
CTSD-213ENST00000637915 ONECUT3O60422 494 aaPredicted RBP19.45■□□□□ 0.7
CTSD-213ENST00000637915 NLRP3Q96P20 1036 aa19.45■□□□□ 0.7
CTSD-213ENST00000637915 LRP2BPQ9P2M1 347 aa19.45■□□□□ 0.7
CTSD-213ENST00000637915 TFIP11Q9UBB9 837 aaKnown RBP19.45■□□□□ 0.7
CTSD-213ENST00000637915 PNPLA7Q6ZV29 1317 aa19.45■□□□□ 0.7
CTSD-213ENST00000637915 CHD4Q14839 1912 aa19.45■□□□□ 0.7
CTSD-213ENST00000637915 GSG1L2A8MUP6 293 aa19.44■□□□□ 0.7
CTSD-213ENST00000637915 PPFIA3O75145 1194 aa19.44■□□□□ 0.7
CTSD-213ENST00000637915 LETM1O95202 739 aaPredicted RBP19.44■□□□□ 0.7
CTSD-213ENST00000637915 CYB5R4Q7L1T6 521 aa19.44■□□□□ 0.7
CTSD-213ENST00000637915 LCORLQ8N3X6 602 aa19.44■□□□□ 0.7
CTSD-213ENST00000637915 LEO1Q8WVC0 666 aaPredicted RBP19.44■□□□□ 0.7
CTSD-213ENST00000637915 SPATA32Q96LK8 384 aa19.44■□□□□ 0.7
CTSD-213ENST00000637915 NAPBQ9H115 298 aa19.44■□□□□ 0.7
CTSD-213ENST00000637915 GNL3LQ9NVN8 582 aaKnown RBP19.44■□□□□ 0.7
CTSD-213ENST00000637915 NEDD4P46934 1319 aa19.44■□□□□ 0.7
CTSD-213ENST00000637915 FDPSP14324 419 aaKnown RBP19.44■□□□□ 0.7
CTSD-213ENST00000637915 TPTE2Q6XPS3 522 aa19.44■□□□□ 0.7
CTSD-213ENST00000637915 GNAT2P19087 354 aa19.43■□□□□ 0.7
CTSD-213ENST00000637915 HSPA1LP34931 641 aa19.43■□□□□ 0.7
CTSD-213ENST00000637915 FOSBP53539 338 aa19.43■□□□□ 0.7
CTSD-213ENST00000637915 RPS8P62241 208 aaKnown RBP19.43■□□□□ 0.7
CTSD-213ENST00000637915 CCDC24Q8N4L8 307 aa19.43■□□□□ 0.7
CTSD-213ENST00000637915 ANGEL1Q9UNK9 670 aaKnown RBP19.43■□□□□ 0.7
CTSD-213ENST00000637915 TNRC6CQ9HCJ0 1690 aaKnown RBP19.43■□□□□ 0.7
CTSD-213ENST00000637915 B4E1Z4 1266 aa19.43■□□□□ 0.7
CTSD-213ENST00000637915 PRKAB2O43741 272 aa19.43■□□□□ 0.7
CTSD-213ENST00000637915 CAVIN4Q5BKX8 364 aa19.43■□□□□ 0.7
CTSD-213ENST00000637915 SEPT12Q8IYM1 358 aa19.43■□□□□ 0.7
CTSD-213ENST00000637915 SH2B2O14492 632 aaPredicted RBP19.42■□□□□ 0.7
CTSD-213ENST00000637915 DHX16O60231 1041 aaKnown RBP19.42■□□□□ 0.7
CTSD-213ENST00000637915 MIGA1Q8NAN2 632 aa19.42■□□□□ 0.7
CTSD-213ENST00000637915 RNF214Q8ND24 703 aa19.42■□□□□ 0.7
CTSD-213ENST00000637915 FAM84BQ96KN1 310 aaPredicted RBP19.42■□□□□ 0.7
CTSD-213ENST00000637915 SLC4A4Q9Y6R1 1079 aa19.42■□□□□ 0.7
CTSD-213ENST00000637915 CACNA1SQ13698 1873 aa19.42■□□□□ 0.7
CTSD-213ENST00000637915 ADGRA1Q86SQ6 560 aa19.41■□□□□ 0.7
CTSD-213ENST00000637915 RAB11FIP4Q86YS3 637 aa19.41■□□□□ 0.7
CTSD-213ENST00000637915 ABCF2Q9UG63 623 aa19.41■□□□□ 0.7
CTSD-213ENST00000637915 TRPC5Q9UL62 973 aaPredicted RBP19.41■□□□□ 0.7
CTSD-213ENST00000637915 CYP7A1P22680 504 aa19.41■□□□□ 0.7
CTSD-213ENST00000637915 RFC4P35249 363 aa19.41■□□□□ 0.7
CTSD-213ENST00000637915 ADD1P35611 737 aaKnown RBP19.41■□□□□ 0.7
CTSD-213ENST00000637915 CTDSPL2Q05D32 466 aa19.41■□□□□ 0.7
CTSD-213ENST00000637915 VPS37DQ86XT2 251 aa19.41■□□□□ 0.7
CTSD-213ENST00000637915 TRIM44Q96DX7 344 aaPredicted RBP19.41■□□□□ 0.7
CTSD-213ENST00000637915 RRAGDQ9NQL2 400 aaPredicted RBP19.41■□□□□ 0.7
CTSD-213ENST00000637915 INCENPQ9NQS7 918 aa19.41■□□□□ 0.7
CTSD-213ENST00000637915 TRAPPC3LQ5T215 181 aa19.4■□□□□ 0.7
CTSD-213ENST00000637915 KLHL34Q8N239 644 aa19.4■□□□□ 0.7
CTSD-213ENST00000637915 TMEM87BQ96K49 555 aa19.4■□□□□ 0.7
CTSD-213ENST00000637915 NACAP1Q9BZK3 213 aa19.4■□□□□ 0.7
CTSD-213ENST00000637915 RAI14Q9P0K7 980 aa19.4■□□□□ 0.7
CTSD-213ENST00000637915 CFAP45Q9UL16 551 aa19.4■□□□□ 0.7
CTSD-213ENST00000637915 TACC3Q9Y6A5 838 aa19.4■□□□□ 0.7
CTSD-213ENST00000637915 LIG1P18858 919 aa19.39■□□□□ 0.7
CTSD-213ENST00000637915 KLRK1P26718 216 aa19.39■□□□□ 0.7
CTSD-213ENST00000637915 TM4SF1P30408 202 aa19.39■□□□□ 0.7
CTSD-213ENST00000637915 TDO2P48775 406 aa19.39■□□□□ 0.7
CTSD-213ENST00000637915 GUCY1B3Q02153 619 aa19.39■□□□□ 0.7
CTSD-213ENST00000637915 FAM196AQ6ZSG2 479 aa19.39■□□□□ 0.7
CTSD-213ENST00000637915 FBXO33Q7Z6M2 555 aa19.39■□□□□ 0.7
CTSD-213ENST00000637915 IGDCC4Q8TDY8 1250 aa19.39■□□□□ 0.7
CTSD-213ENST00000637915 PDLIM2Q96JY6 352 aa19.39■□□□□ 0.7
CTSD-213ENST00000637915 BCL11BQ9C0K0 894 aaPredicted RBP19.39■□□□□ 0.7
CTSD-213ENST00000637915 LRRC4BQ9NT99 713 aa19.39■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms