RNA–Protein interactions for RNA: ENST00000636632.1

TBP-208, Transcript of TATA-box binding protein, human

TSL 5

Gene TBP, Length 1,955 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TBP-208	ENST00000636632	CCDC9	Q9Y3X0	531 aa	Known RBP	13.81	□□□□□ -0.2
TBP-208	ENST00000636632	SPATA31A3	Q5VYP0	1347 aa		13.8	□□□□□ -0.2
TBP-208	ENST00000636632	PSD	A5PKW4	1024 aa	Predicted RBP	13.8	□□□□□ -0.2
TBP-208	ENST00000636632	IKBKB	O14920	756 aa		13.8	□□□□□ -0.2
TBP-208	ENST00000636632	FGA	P02671	866 aa		13.8	□□□□□ -0.2
TBP-208	ENST00000636632	NLRP12	P59046	1061 aa		13.8	□□□□□ -0.2
TBP-208	ENST00000636632	NCAPH	Q15003	741 aa		13.8	□□□□□ -0.2
TBP-208	ENST00000636632	FILIP1	Q7Z7B0	1213 aa		13.8	□□□□□ -0.2
TBP-208	ENST00000636632	NCOA7	Q8NI08	942 aa		13.8	□□□□□ -0.2
TBP-208	ENST00000636632	XAGE2	Q96GT9	111 aa		13.8	□□□□□ -0.2
TBP-208	ENST00000636632	ERO1A	Q96HE7	468 aa		13.8	□□□□□ -0.2
TBP-208	ENST00000636632	MROH7-TTC4	A0A0A0MT08	1334 aa		13.8	□□□□□ -0.2
TBP-208	ENST00000636632	XIRP1	Q702N8	1843 aa	Known RBP	13.8	□□□□□ -0.2
TBP-208	ENST00000636632	TTC39A	Q5SRH9	613 aa		13.8	□□□□□ -0.2
TBP-208	ENST00000636632	ANO1	Q5XXA6	986 aa		13.8	□□□□□ -0.2
TBP-208	ENST00000636632	ZNF397	Q8NF99	534 aa	Predicted RBP	13.8	□□□□□ -0.2
TBP-208	ENST00000636632	L2HGDH	Q9H9P8	463 aa		13.8	□□□□□ -0.2
TBP-208	ENST00000636632	NAP1L2	Q9ULW6	460 aa	Predicted RBP	13.8	□□□□□ -0.2
TBP-208	ENST00000636632	COL22A1	Q8NFW1	1626 aa	Predicted RBP	13.79	□□□□□ -0.2
TBP-208	ENST00000636632	ZMYM6	O95789	1325 aa		13.79	□□□□□ -0.2
TBP-208	ENST00000636632	WDR17	Q8IZU2	1322 aa		13.79	□□□□□ -0.2
TBP-208	ENST00000636632	KIF28P	B7ZC32	967 aa		13.79	□□□□□ -0.2
TBP-208	ENST00000636632	KIF20A	O95235	890 aa		13.79	□□□□□ -0.2
TBP-208	ENST00000636632	A1BG	P04217	495 aa		13.79	□□□□□ -0.2
TBP-208	ENST00000636632	TUBB4A	P04350	444 aa		13.79	□□□□□ -0.2
TBP-208	ENST00000636632	SLC3A2	P08195	630 aa	Known RBP	13.79	□□□□□ -0.2
TBP-208	ENST00000636632	ADORA1	P30542	326 aa		13.79	□□□□□ -0.2
TBP-208	ENST00000636632	CHRNA2	Q15822	529 aa		13.79	□□□□□ -0.2
TBP-208	ENST00000636632	KIF18A	Q8NI77	898 aa		13.79	□□□□□ -0.2
TBP-208	ENST00000636632	ZNF512B	Q96KM6	892 aa	Predicted RBP	13.79	□□□□□ -0.2
TBP-208	ENST00000636632	XPO4	Q9C0E2	1151 aa	Known RBP	13.79	□□□□□ -0.2
TBP-208	ENST00000636632	ZBTB3	Q9H5J0	574 aa		13.79	□□□□□ -0.2
TBP-208	ENST00000636632	TUBE1	Q9UJT0	475 aa		13.79	□□□□□ -0.2
TBP-208	ENST00000636632	ZNF215	Q9UL58	517 aa	Predicted RBP	13.79	□□□□□ -0.2
TBP-208	ENST00000636632	MORC2	Q9Y6X9	1032 aa	Predicted RBP	13.79	□□□□□ -0.2
TBP-208	ENST00000636632	COL5A2	P05997	1499 aa	Predicted RBP	13.79	□□□□□ -0.2
TBP-208	ENST00000636632	SPDYE4	A6NLX3	237 aa		13.78	□□□□□ -0.2
TBP-208	ENST00000636632	ZNF202	O95125	648 aa		13.78	□□□□□ -0.2
TBP-208	ENST00000636632	CSF1R	P07333	972 aa		13.78	□□□□□ -0.2
TBP-208	ENST00000636632	PFKFB1	P16118	471 aa		13.78	□□□□□ -0.2
TBP-208	ENST00000636632	SCARF1	Q14162	830 aa		13.78	□□□□□ -0.2
TBP-208	ENST00000636632	SLC39A14	Q15043	492 aa		13.78	□□□□□ -0.2
TBP-208	ENST00000636632	SF3A1	Q15459	793 aa	Known RBP	13.78	□□□□□ -0.2
TBP-208	ENST00000636632	E4F1	Q66K89	784 aa	Predicted RBP	13.78	□□□□□ -0.2
TBP-208	ENST00000636632	OTUD7B	Q6GQQ9	843 aa		13.78	□□□□□ -0.2
TBP-208	ENST00000636632	ARMCX5	Q6P1M9	558 aa		13.78	□□□□□ -0.2
TBP-208	ENST00000636632	ERCC4	Q92889	916 aa	Predicted RBP	13.78	□□□□□ -0.2
TBP-208	ENST00000636632	NBPF3	Q9H094	633 aa		13.78	□□□□□ -0.2
TBP-208	ENST00000636632	FAM53C	Q9NYF3	392 aa		13.78	□□□□□ -0.2
TBP-208	ENST00000636632	HPSE	Q9Y251	543 aa		13.78	□□□□□ -0.2
TBP-208	ENST00000636632	MAP3K15	Q6ZN16	1313 aa		13.78	□□□□□ -0.2
TBP-208	ENST00000636632	PPP6R2	O75170	966 aa		13.78	□□□□□ -0.2
TBP-208	ENST00000636632	PCCA	P05165	728 aa	Predicted RBP	13.78	□□□□□ -0.2
TBP-208	ENST00000636632	ATF3	P18847	181 aa		13.78	□□□□□ -0.2
TBP-208	ENST00000636632	HAND2	P61296	217 aa		13.78	□□□□□ -0.2
TBP-208	ENST00000636632	FKBP4	Q02790	459 aa	Known RBP eCLIP	13.78	□□□□□ -0.2
TBP-208	ENST00000636632	GABPB1	Q06547	395 aa	Predicted RBP	13.78	□□□□□ -0.2
TBP-208	ENST00000636632	TCIRG1	Q13488	830 aa		13.78	□□□□□ -0.2
TBP-208	ENST00000636632	NAA30	Q147X3	362 aa	Predicted RBP	13.78	□□□□□ -0.2
TBP-208	ENST00000636632	CCDC57	Q2TAC2	916 aa		13.78	□□□□□ -0.2
TBP-208	ENST00000636632	CABLES1	Q8TDN4	633 aa		13.78	□□□□□ -0.2
TBP-208	ENST00000636632	PUS7L	Q9H0K6	701 aa	Known RBP	13.78	□□□□□ -0.2
TBP-208	ENST00000636632	HSD3B7	Q9H2F3	369 aa		13.78	□□□□□ -0.2
TBP-208	ENST00000636632	GPAA1	O43292	621 aa		13.77	□□□□□ -0.21
TBP-208	ENST00000636632	MYO1B	O43795	1136 aa		13.77	□□□□□ -0.21
TBP-208	ENST00000636632	PPFIA3	O75145	1194 aa		13.77	□□□□□ -0.21
TBP-208	ENST00000636632	POLR3D	P05423	398 aa	Predicted RBP	13.77	□□□□□ -0.21
TBP-208	ENST00000636632	TPM4	P67936	248 aa		13.77	□□□□□ -0.21
TBP-208	ENST00000636632	ZRSR1	Q15695	479 aa	Known RBP	13.77	□□□□□ -0.21
TBP-208	ENST00000636632	WASHC4	Q2M389	1173 aa		13.77	□□□□□ -0.21
TBP-208	ENST00000636632	SYNE3	Q6ZMZ3	975 aa		13.77	□□□□□ -0.21
TBP-208	ENST00000636632	RALYL	Q86SE5	291 aa	Known RBP	13.77	□□□□□ -0.21
TBP-208	ENST00000636632	ZCRB1	Q8TBF4	217 aa	Known RBP	13.77	□□□□□ -0.21
TBP-208	ENST00000636632	PPP1R13B	Q96KQ4	1090 aa		13.77	□□□□□ -0.21
TBP-208	ENST00000636632	IFNK	Q9P0W0	207 aa		13.77	□□□□□ -0.21
TBP-208	ENST00000636632	ITGB4	P16144	1822 aa		13.77	□□□□□ -0.21
TBP-208	ENST00000636632	NID2	Q14112	1375 aa		13.77	□□□□□ -0.21
TBP-208	ENST00000636632	CDHR2	Q9BYE9	1310 aa		13.77	□□□□□ -0.21
TBP-208	ENST00000636632	CPLX1	O14810	134 aa		13.76	□□□□□ -0.21
TBP-208	ENST00000636632	SLU7	O95391	586 aa	Known RBP	13.76	□□□□□ -0.21
TBP-208	ENST00000636632	ZAP70	P43403	619 aa		13.76	□□□□□ -0.21
TBP-208	ENST00000636632	ZNF592	Q92610	1267 aa		13.76	□□□□□ -0.21
TBP-208	ENST00000636632	ANGEL1	Q9UNK9	670 aa	Known RBP	13.76	□□□□□ -0.21
TBP-208	ENST00000636632	NHSL1	Q5SYE7	1610 aa		13.76	□□□□□ -0.21
TBP-208	ENST00000636632	BCOR	Q6W2J9	1755 aa		13.76	□□□□□ -0.21
TBP-208	ENST00000636632	ZNF213	O14771	459 aa		13.76	□□□□□ -0.21
TBP-208	ENST00000636632	WDHD1	O75717	1129 aa	Predicted RBP	13.76	□□□□□ -0.21
TBP-208	ENST00000636632	SFPQ	P23246	707 aa	Known RBP eCLIP	13.76	□□□□□ -0.21
TBP-208	ENST00000636632	PTPA	Q15257	358 aa		13.76	□□□□□ -0.21
TBP-208	ENST00000636632	DDX17	Q92841	729 aa	Known RBP	13.76	□□□□□ -0.21
TBP-208	ENST00000636632	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	13.76	□□□□□ -0.21
TBP-208	ENST00000636632	NUP98	P52948	1817 aa		13.76	□□□□□ -0.21
TBP-208	ENST00000636632	SH2B2	O14492	632 aa	Predicted RBP	13.75	□□□□□ -0.21
TBP-208	ENST00000636632	CDKL5	O76039	1030 aa		13.75	□□□□□ -0.21
TBP-208	ENST00000636632	ADD2	P35612	726 aa		13.75	□□□□□ -0.21
TBP-208	ENST00000636632	KMT5B	Q4FZB7	885 aa		13.75	□□□□□ -0.21
TBP-208	ENST00000636632	CCDC93	Q567U6	631 aa		13.75	□□□□□ -0.21
TBP-208	ENST00000636632	GORAB	Q5T7V8	394 aa		13.75	□□□□□ -0.21
TBP-208	ENST00000636632	TMC6	Q7Z403	805 aa		13.75	□□□□□ -0.21
TBP-208	ENST00000636632	STK36	Q9NRP7	1315 aa		13.75	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms