RNA–Protein interactions for RNA: ENST00000635251.1

PSPC1-207, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 2,285 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-207ENST00000635251 LDHAL6AQ6ZMR3 332 aa12.44□□□□□ -0.42
PSPC1-207ENST00000635251 ZBTB38Q8NAP3 1195 aaPredicted RBP12.44□□□□□ -0.42
PSPC1-207ENST00000635251 ANKRD7Q92527 254 aa12.44□□□□□ -0.42
PSPC1-207ENST00000635251 PRDM10Q9NQV6 1147 aa12.44□□□□□ -0.42
PSPC1-207ENST00000635251 KIF28PB7ZC32 967 aa12.44□□□□□ -0.42
PSPC1-207ENST00000635251 BIN1O00499 593 aa12.44□□□□□ -0.42
PSPC1-207ENST00000635251 SMC2O95347 1197 aa12.44□□□□□ -0.42
PSPC1-207ENST00000635251 SLC3A2P08195 630 aaKnown RBP12.44□□□□□ -0.42
PSPC1-207ENST00000635251 EVA1CP58658 441 aa12.44□□□□□ -0.42
PSPC1-207ENST00000635251 RBM6P78332 1123 aaKnown RBP12.44□□□□□ -0.42
PSPC1-207ENST00000635251 PTPN14Q15678 1187 aa12.44□□□□□ -0.42
PSPC1-207ENST00000635251 ANO1Q5XXA6 986 aa12.44□□□□□ -0.42
PSPC1-207ENST00000635251 CNNM1Q9NRU3 951 aa12.44□□□□□ -0.42
PSPC1-207ENST00000635251 ABCC12Q96J65 1359 aa12.44□□□□□ -0.42
PSPC1-207ENST00000635251 NWD2Q9ULI1 1742 aa12.44□□□□□ -0.42
PSPC1-207ENST00000635251 USP27XA6NNY8 438 aa12.43□□□□□ -0.42
PSPC1-207ENST00000635251 ZNF202O95125 648 aa12.43□□□□□ -0.42
PSPC1-207ENST00000635251 CSF1RP07333 972 aa12.43□□□□□ -0.42
PSPC1-207ENST00000635251 MCAMP43121 646 aa12.43□□□□□ -0.42
PSPC1-207ENST00000635251 TRIM28Q13263 835 aaKnown RBP12.43□□□□□ -0.42
PSPC1-207ENST00000635251 DPCR1Q3MIW9 517 aa12.43□□□□□ -0.42
PSPC1-207ENST00000635251 SLC9C2Q5TAH2 1124 aa12.43□□□□□ -0.42
PSPC1-207ENST00000635251 DNAJC10Q8IXB1 793 aa12.43□□□□□ -0.42
PSPC1-207ENST00000635251 PLA2G12BQ9BX93 195 aa12.43□□□□□ -0.42
PSPC1-207ENST00000635251 TNS2Q63HR2 1409 aa12.43□□□□□ -0.42
PSPC1-207ENST00000635251 WDR19Q8NEZ3 1342 aa12.43□□□□□ -0.42
PSPC1-207ENST00000635251 ANKRD18BA2A2Z9 1011 aa12.42□□□□□ -0.42
PSPC1-207ENST00000635251 IDH1O75874 414 aaKnown RBP12.42□□□□□ -0.42
PSPC1-207ENST00000635251 ITGA6P23229 1130 aa12.42□□□□□ -0.42
PSPC1-207ENST00000635251 GPTP24298 496 aa12.42□□□□□ -0.42
PSPC1-207ENST00000635251 METAP2P50579 478 aaKnown RBP eCLIP12.42□□□□□ -0.42
PSPC1-207ENST00000635251 GSDMDP57764 484 aa12.42□□□□□ -0.42
PSPC1-207ENST00000635251 KIF23Q02241 960 aaPredicted RBP12.42□□□□□ -0.42
PSPC1-207ENST00000635251 TTF1Q15361 905 aaPredicted RBP12.42□□□□□ -0.42
PSPC1-207ENST00000635251 ALG1Q9BT22 464 aa12.42□□□□□ -0.42
PSPC1-207ENST00000635251 CARD10Q9BWT7 1032 aa12.42□□□□□ -0.42
PSPC1-207ENST00000635251 TRMT1Q9NXH9 659 aaKnown RBP12.42□□□□□ -0.42
PSPC1-207ENST00000635251 PAPPAQ13219 1627 aa12.42□□□□□ -0.42
PSPC1-207ENST00000635251 COL5A2P05997 1499 aaPredicted RBP12.42□□□□□ -0.42
PSPC1-207ENST00000635251 PFKFB1P16118 471 aa12.42□□□□□ -0.42
PSPC1-207ENST00000635251 ADD2P35612 726 aa12.42□□□□□ -0.42
PSPC1-207ENST00000635251 CCZ1BP86790 482 aa12.42□□□□□ -0.42
PSPC1-207ENST00000635251 CCZ1P86791 482 aaPredicted RBP12.42□□□□□ -0.42
PSPC1-207ENST00000635251 NCBP1Q09161 790 aaKnown RBP12.42□□□□□ -0.42
PSPC1-207ENST00000635251 CPLX2Q6PUV4 134 aaKnown RBP12.42□□□□□ -0.42
PSPC1-207ENST00000635251 BRINP3Q76B58 766 aa12.42□□□□□ -0.42
PSPC1-207ENST00000635251 SYNE4Q8N205 404 aa12.42□□□□□ -0.42
PSPC1-207ENST00000635251 TEX13AQ9BXU3 409 aaPredicted RBP12.42□□□□□ -0.42
PSPC1-207ENST00000635251 ANGEL1Q9UNK9 670 aaKnown RBP12.42□□□□□ -0.42
PSPC1-207ENST00000635251 ZMYM6O95789 1325 aa12.41□□□□□ -0.42
PSPC1-207ENST00000635251 CDKL5O76039 1030 aa12.41□□□□□ -0.42
PSPC1-207ENST00000635251 MARCKSP29966 332 aaPredicted RBP12.41□□□□□ -0.42
PSPC1-207ENST00000635251 NLRP12P59046 1061 aa12.41□□□□□ -0.42
PSPC1-207ENST00000635251 SYCP1Q15431 976 aa12.41□□□□□ -0.42
PSPC1-207ENST00000635251 BPIFA3Q9BQP9 254 aa12.41□□□□□ -0.42
PSPC1-207ENST00000635251 BCL11BQ9C0K0 894 aaPredicted RBP12.41□□□□□ -0.42
PSPC1-207ENST00000635251 GREM2Q9H772 168 aa12.41□□□□□ -0.42
PSPC1-207ENST00000635251 RIPOR2Q9Y4F9 1068 aa12.41□□□□□ -0.42
PSPC1-207ENST00000635251 STRCP1A6NGW2 1772 aa12.41□□□□□ -0.42
PSPC1-207ENST00000635251 SPDYE4A6NLX3 237 aa12.41□□□□□ -0.42
PSPC1-207ENST00000635251 STARD3NLO95772 234 aa12.41□□□□□ -0.42
PSPC1-207ENST00000635251 RXRAP19793 462 aa12.41□□□□□ -0.42
PSPC1-207ENST00000635251 CMA1P23946 247 aa12.41□□□□□ -0.42
PSPC1-207ENST00000635251 U2AF2P26368 475 aaKnown RBP eCLIP12.41□□□□□ -0.429e-10■■□□□ 11.9
PSPC1-207ENST00000635251 NFXL1Q6ZNB6 911 aa12.41□□□□□ -0.42
PSPC1-207ENST00000635251 TMC6Q7Z403 805 aa12.41□□□□□ -0.42
PSPC1-207ENST00000635251 TBC1D10CQ8IV04 446 aa12.41□□□□□ -0.42
PSPC1-207ENST00000635251 HOMEZQ8IX15 550 aa12.41□□□□□ -0.42
PSPC1-207ENST00000635251 IFNKQ9P0W0 207 aa12.41□□□□□ -0.42
PSPC1-207ENST00000635251 IMPACTQ9P2X3 320 aa12.41□□□□□ -0.42
PSPC1-207ENST00000635251 ASAP1Q9ULH1 1129 aa12.41□□□□□ -0.42
PSPC1-207ENST00000635251 TBC1D2BQ9UPU7 963 aa12.41□□□□□ -0.42
PSPC1-207ENST00000635251 RIC1Q4ADV7 1423 aa12.41□□□□□ -0.42
PSPC1-207ENST00000635251 MAP3K15Q6ZN16 1313 aa12.4□□□□□ -0.42
PSPC1-207ENST00000635251 TRIM29Q14134 588 aa12.4□□□□□ -0.42
PSPC1-207ENST00000635251 ISM2Q6H9L7 571 aa12.4□□□□□ -0.42
PSPC1-207ENST00000635251 GIGYF2Q6Y7W6 1299 aaKnown RBP12.4□□□□□ -0.42
PSPC1-207ENST00000635251 CYB5R4Q7L1T6 521 aa12.4□□□□□ -0.42
PSPC1-207ENST00000635251 MICU3Q86XE3 530 aa12.4□□□□□ -0.42
PSPC1-207ENST00000635251 TTLL11Q8NHH1 800 aa12.4□□□□□ -0.42
PSPC1-207ENST00000635251 AIFM3Q96NN9 605 aa12.4□□□□□ -0.42
PSPC1-207ENST00000635251 XPO4Q9C0E2 1151 aaKnown RBP12.4□□□□□ -0.42
PSPC1-207ENST00000635251 DENND2AQ9ULE3 1009 aa12.4□□□□□ -0.42
PSPC1-207ENST00000635251 CDHR2Q9BYE9 1310 aa12.4□□□□□ -0.42
PSPC1-207ENST00000635251 ZNF532Q9HCE3 1301 aa12.4□□□□□ -0.42
PSPC1-207ENST00000635251 B4E1Z4 1266 aa12.4□□□□□ -0.42
PSPC1-207ENST00000635251 SH2B2O14492 632 aaPredicted RBP12.4□□□□□ -0.42
PSPC1-207ENST00000635251 CTSWP56202 376 aa12.4□□□□□ -0.42
PSPC1-207ENST00000635251 SLC39A14Q15043 492 aa12.4□□□□□ -0.42
PSPC1-207ENST00000635251 HLFQ16534 295 aa12.4□□□□□ -0.42
PSPC1-207ENST00000635251 AXDND1Q5T1B0 1012 aaPredicted RBP12.4□□□□□ -0.42
PSPC1-207ENST00000635251 KRT40Q6A162 431 aa12.4□□□□□ -0.42
PSPC1-207ENST00000635251 NBPF11Q86T75 865 aa12.4□□□□□ -0.42
PSPC1-207ENST00000635251 CCAR2Q8N163 923 aaKnown RBP12.4□□□□□ -0.42
PSPC1-207ENST00000635251 JMYQ8N9B5 988 aa12.4□□□□□ -0.42
PSPC1-207ENST00000635251 PIH1D3Q9NQM4 214 aaKnown RBP12.4□□□□□ -0.42
PSPC1-207ENST00000635251 NRDCO43847 1150 aa12.39□□□□□ -0.43
PSPC1-207ENST00000635251 WDHD1O75717 1129 aaPredicted RBP12.39□□□□□ -0.43
PSPC1-207ENST00000635251 SYKP43405 635 aa12.39□□□□□ -0.43
PSPC1-207ENST00000635251 NYAP1Q6ZVC0 841 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms