RNA–Protein interactions for RNA: ENST00000632897.1

LIMS4-204, Transcript of LIM zinc finger domain containing 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS4, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-204ENST00000632897 CRY2Q49AN0 593 aa16.86■□□□□ 0.29
LIMS4-204ENST00000632897 TTLL5Q6EMB2 1281 aa16.86■□□□□ 0.29
LIMS4-204ENST00000632897 FAM84BQ96KN1 310 aaPredicted RBP16.86■□□□□ 0.29
LIMS4-204ENST00000632897 WDR19Q8NEZ3 1342 aa16.86■□□□□ 0.29
LIMS4-204ENST00000632897 ZNF213O14771 459 aa16.86■□□□□ 0.29
LIMS4-204ENST00000632897 IGSF3O75054 1194 aa16.86■□□□□ 0.29
LIMS4-204ENST00000632897 TMED8Q6PL24 325 aaPredicted RBP16.86■□□□□ 0.29
LIMS4-204ENST00000632897 NLGN2Q8NFZ4 835 aa16.86■□□□□ 0.29
LIMS4-204ENST00000632897 RPGRQ92834 1020 aaKnown RBP16.86■□□□□ 0.29
LIMS4-204ENST00000632897 CHMP4CQ96CF2 233 aa16.86■□□□□ 0.29
LIMS4-204ENST00000632897 TCEANC2Q96MN5 208 aa16.86■□□□□ 0.29
LIMS4-204ENST00000632897 LRP2BPQ9P2M1 347 aa16.86■□□□□ 0.29
LIMS4-204ENST00000632897 COL1A1P02452 1464 aaPredicted RBP16.85■□□□□ 0.29
LIMS4-204ENST00000632897 GJB2P29033 226 aa16.85■□□□□ 0.29
LIMS4-204ENST00000632897 FGD1P98174 961 aa16.85■□□□□ 0.29
LIMS4-204ENST00000632897 RBM17Q96I25 401 aaKnown RBP16.85■□□□□ 0.29
LIMS4-204ENST00000632897 LEMD3Q9Y2U8 911 aa16.85■□□□□ 0.29
LIMS4-204ENST00000632897 PATL2C9JE40 543 aaKnown RBP16.84■□□□□ 0.29
LIMS4-204ENST00000632897 POLRMTO00411 1230 aaKnown RBP16.84■□□□□ 0.29
LIMS4-204ENST00000632897 STX6O43752 255 aa16.84■□□□□ 0.29
LIMS4-204ENST00000632897 MBD4O95243 580 aa16.84■□□□□ 0.29
LIMS4-204ENST00000632897 HIBADHP31937 336 aaKnown RBP16.84■□□□□ 0.29
LIMS4-204ENST00000632897 NECAB1Q8N987 351 aa16.84■□□□□ 0.29
LIMS4-204ENST00000632897 NCOA7Q8NI08 942 aa16.84■□□□□ 0.29
LIMS4-204ENST00000632897 GTF3C6Q969F1 213 aa16.84■□□□□ 0.29
LIMS4-204ENST00000632897 A0A0G2JLW4 131 aa16.83■□□□□ 0.28
LIMS4-204ENST00000632897 KLRG2A4D1S0 409 aaPredicted RBP16.83■□□□□ 0.28
LIMS4-204ENST00000632897 PDCP20941 246 aa16.83■□□□□ 0.28
LIMS4-204ENST00000632897 SYT1P21579 422 aa16.83■□□□□ 0.28
LIMS4-204ENST00000632897 DDR1Q08345 913 aa16.83■□□□□ 0.28
LIMS4-204ENST00000632897 MCTP1Q6DN14 999 aa16.83■□□□□ 0.28
LIMS4-204ENST00000632897 BRF1Q92994 677 aa16.83■□□□□ 0.28
LIMS4-204ENST00000632897 XDHP47989 1333 aa16.83■□□□□ 0.28
LIMS4-204ENST00000632897 IRS2Q9Y4H2 1338 aa16.83■□□□□ 0.28
LIMS4-204ENST00000632897 PFKFB2O60825 505 aa16.82■□□□□ 0.28
LIMS4-204ENST00000632897 APPP05067 770 aa16.82■□□□□ 0.28
LIMS4-204ENST00000632897 ZSCAN22P10073 491 aaPredicted RBP16.82■□□□□ 0.28
LIMS4-204ENST00000632897 HOXA10P31260 410 aaPredicted RBP16.82■□□□□ 0.28
LIMS4-204ENST00000632897 C15orf52Q6ZUT6 534 aaKnown RBP16.82■□□□□ 0.28
LIMS4-204ENST00000632897 RALYLQ86SE5 291 aaKnown RBP16.82■□□□□ 0.28
LIMS4-204ENST00000632897 MB21D2Q8IYB1 491 aaPredicted RBP16.82■□□□□ 0.28
LIMS4-204ENST00000632897 NLGN1Q8N2Q7 840 aa16.82■□□□□ 0.28
LIMS4-204ENST00000632897 LLPHQ9BRT6 129 aaKnown RBP16.82■□□□□ 0.28
LIMS4-204ENST00000632897 NACAP1Q9BZK3 213 aa16.82■□□□□ 0.28
LIMS4-204ENST00000632897 TIAM2Q8IVF5 1701 aa16.82■□□□□ 0.28
LIMS4-204ENST00000632897 MYH13Q9UKX3 1938 aa16.82■□□□□ 0.28
LIMS4-204ENST00000632897 MAST2Q6P0Q8 1798 aa16.81■□□□□ 0.28
LIMS4-204ENST00000632897 MCM5P33992 734 aa16.81■□□□□ 0.28
LIMS4-204ENST00000632897 EVCP57679 992 aa16.81■□□□□ 0.28
LIMS4-204ENST00000632897 HAND2P61296 217 aa16.81■□□□□ 0.28
LIMS4-204ENST00000632897 TRDNQ13061 729 aa16.81■□□□□ 0.28
LIMS4-204ENST00000632897 TMC4Q7Z404 712 aa16.81■□□□□ 0.28
LIMS4-204ENST00000632897 ZNF274Q96GC6 653 aaPredicted RBP16.81■□□□□ 0.28
LIMS4-204ENST00000632897 RAI14Q9P0K7 980 aa16.81■□□□□ 0.28
LIMS4-204ENST00000632897 IQSEC3Q9UPP2 1182 aaPredicted RBP16.81■□□□□ 0.28
LIMS4-204ENST00000632897 ATP6V1DQ9Y5K8 247 aa16.81■□□□□ 0.28
LIMS4-204ENST00000632897 NRXN2Q9P2S2 1712 aa16.81■□□□□ 0.28
LIMS4-204ENST00000632897 WTIPA6NIX2 430 aaPredicted RBP16.8■□□□□ 0.28
LIMS4-204ENST00000632897 BBOX1O75936 387 aa16.8■□□□□ 0.28
LIMS4-204ENST00000632897 CYP7A1P22680 504 aa16.8■□□□□ 0.28
LIMS4-204ENST00000632897 KLRK1P26718 216 aa16.8■□□□□ 0.28
LIMS4-204ENST00000632897 CRAMP1Q96RY5 1269 aa16.8■□□□□ 0.28
LIMS4-204ENST00000632897 NAPBQ9H115 298 aa16.8■□□□□ 0.28
LIMS4-204ENST00000632897 ARMT1Q9H993 441 aa16.8■□□□□ 0.28
LIMS4-204ENST00000632897 LMBRD1Q9NUN5 540 aa16.8■□□□□ 0.28
LIMS4-204ENST00000632897 ANKIB1Q9P2G1 1089 aa16.8■□□□□ 0.28
LIMS4-204ENST00000632897 ABCF2Q9UG63 623 aa16.8■□□□□ 0.28
LIMS4-204ENST00000632897 CACNA1SQ13698 1873 aa16.8■□□□□ 0.28
LIMS4-204ENST00000632897 KLHL40Q2TBA0 621 aa16.8■□□□□ 0.28
LIMS4-204ENST00000632897 IFNL3Q8IZI9 196 aa16.8■□□□□ 0.28
LIMS4-204ENST00000632897 LRRC2Q9BYS8 371 aa16.8■□□□□ 0.28
LIMS4-204ENST00000632897 EPB41L4AQ9HCS5 686 aaPredicted RBP16.8■□□□□ 0.28
LIMS4-204ENST00000632897 DUOX1Q9NRD9 1551 aa16.79■□□□□ 0.28
LIMS4-204ENST00000632897 GSG1L2A8MUP6 293 aa16.79■□□□□ 0.28
LIMS4-204ENST00000632897 PRC1O43663 620 aa16.79■□□□□ 0.28
LIMS4-204ENST00000632897 F13A1P00488 732 aa16.79■□□□□ 0.28
LIMS4-204ENST00000632897 ATP2B4P23634 1241 aa16.79■□□□□ 0.28
LIMS4-204ENST00000632897 STK3Q13188 491 aa16.79■□□□□ 0.28
LIMS4-204ENST00000632897 FOXD4L5Q5VV16 416 aaPredicted RBP16.79■□□□□ 0.28
LIMS4-204ENST00000632897 LCORLQ8N3X6 602 aa16.79■□□□□ 0.28
LIMS4-204ENST00000632897 FOXD4L4Q8WXT5 416 aaPredicted RBP16.79■□□□□ 0.28
LIMS4-204ENST00000632897 NBPF3Q9H094 633 aa16.79■□□□□ 0.28
LIMS4-204ENST00000632897 MTMR6Q9Y217 621 aa16.79■□□□□ 0.28
LIMS4-204ENST00000632897 SLC4A4Q9Y6R1 1079 aa16.79■□□□□ 0.28
LIMS4-204ENST00000632897 LRRC37AA6NMS7 1700 aa16.78■□□□□ 0.28
LIMS4-204ENST00000632897 MAGEB6P1A0A0J9YX57 407 aa16.78■□□□□ 0.28
LIMS4-204ENST00000632897 YBX3P16989 372 aaKnown RBP eCLIP16.78■□□□□ 0.28
LIMS4-204ENST00000632897 APOBRQ0VD83 1088 aa16.78■□□□□ 0.28
LIMS4-204ENST00000632897 LARP1BQ659C4 914 aaKnown RBP16.78■□□□□ 0.28
LIMS4-204ENST00000632897 SPTY2D1Q68D10 685 aaPredicted RBP16.78■□□□□ 0.28
LIMS4-204ENST00000632897 NAA16Q6N069 864 aaPredicted RBP16.78■□□□□ 0.28
LIMS4-204ENST00000632897 ZNF804AQ7Z570 1209 aa16.78■□□□□ 0.28
LIMS4-204ENST00000632897 TBC1D10CQ8IV04 446 aa16.78■□□□□ 0.28
LIMS4-204ENST00000632897 BRIP1Q9BX63 1249 aa16.78■□□□□ 0.28
LIMS4-204ENST00000632897 CNNM2Q9H8M5 875 aa16.78■□□□□ 0.28
LIMS4-204ENST00000632897 KIF3AQ9Y496 699 aa16.78■□□□□ 0.28
LIMS4-204ENST00000632897 SALL1Q9NSC2 1324 aa16.78■□□□□ 0.28
LIMS4-204ENST00000632897 HMGN5P82970 282 aaKnown RBP16.77■□□□□ 0.28
LIMS4-204ENST00000632897 SCRN1Q12765 414 aa16.77■□□□□ 0.28
LIMS4-204ENST00000632897 SMARCC2Q8TAQ2 1214 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms