RNA–Protein interactions for RNA: ENST00000624931.1

PCF11-207, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

Gene PCF11, Length 1,720 nt, Biotype TEC, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-207ENST00000624931 PSMA5P28066 241 aa20.74■□□□□ 0.91
PCF11-207ENST00000624931 MYO5AQ9Y4I1 1855 aaKnown RBP20.74■□□□□ 0.91
PCF11-207ENST00000624931 ELP1O95163 1332 aa20.73■□□□□ 0.91
PCF11-207ENST00000624931 CASTP20810 708 aaKnown RBP20.73■□□□□ 0.91
PCF11-207ENST00000624931 HOXA10P31260 410 aaPredicted RBP20.73■□□□□ 0.91
PCF11-207ENST00000624931 CACNA1SQ13698 1873 aa20.73■□□□□ 0.91
PCF11-207ENST00000624931 ANKRD1Q15327 319 aa20.73■□□□□ 0.91
PCF11-207ENST00000624931 RASEFQ8IZ41 740 aa20.73■□□□□ 0.91
PCF11-207ENST00000624931 CCDC94Q9BW85 323 aaPredicted RBP20.73■□□□□ 0.91
PCF11-207ENST00000624931 IQSEC3Q9UPP2 1182 aaPredicted RBP20.73■□□□□ 0.91
PCF11-207ENST00000624931 MTMR6Q9Y217 621 aa20.73■□□□□ 0.91
PCF11-207ENST00000624931 GJB2P29033 226 aa20.73■□□□□ 0.91
PCF11-207ENST00000624931 KCNJ4P48050 445 aa20.73■□□□□ 0.91
PCF11-207ENST00000624931 RASGRF1Q13972 1273 aa20.73■□□□□ 0.91
PCF11-207ENST00000624931 UBE4AQ14139 1066 aa20.73■□□□□ 0.91
PCF11-207ENST00000624931 GPR101Q96P66 508 aaPredicted RBP20.73■□□□□ 0.91
PCF11-207ENST00000624931 ALDH8A1Q9H2A2 487 aaPredicted RBP20.73■□□□□ 0.91
PCF11-207ENST00000624931 HMG20BQ9P0W2 317 aa20.73■□□□□ 0.91
PCF11-207ENST00000624931 LRRC37AA6NMS7 1700 aa20.72■□□□□ 0.91
PCF11-207ENST00000624931 COL1A1P02452 1464 aaPredicted RBP20.72■□□□□ 0.91
PCF11-207ENST00000624931 RFX7Q2KHR2 1363 aa20.72■□□□□ 0.91
PCF11-207ENST00000624931 SRGNP10124 158 aa20.72■□□□□ 0.91
PCF11-207ENST00000624931 CHAF1AQ13111 956 aaPredicted RBP20.72■□□□□ 0.91
PCF11-207ENST00000624931 ZNF512BQ96KM6 892 aaPredicted RBP20.72■□□□□ 0.91
PCF11-207ENST00000624931 ANKRD2Q9GZV1 360 aa20.72■□□□□ 0.91
PCF11-207ENST00000624931 PIH1D3Q9NQM4 214 aaKnown RBP20.72■□□□□ 0.91
PCF11-207ENST00000624931 UQCRFS1P1P0C7P4 283 aa20.71■□□□□ 0.91
PCF11-207ENST00000624931 GPSM2P81274 684 aa20.71■□□□□ 0.91
PCF11-207ENST00000624931 FOXD4L6Q3SYB3 417 aaPredicted RBP20.71■□□□□ 0.91
PCF11-207ENST00000624931 FOXD4L3Q6VB84 417 aaPredicted RBP20.71■□□□□ 0.91
PCF11-207ENST00000624931 UPF1Q92900 1129 aaKnown RBP eCLIP20.71■□□□□ 0.914e-10■□□□□ 9.9
PCF11-207ENST00000624931 CRAMP1Q96RY5 1269 aa20.71■□□□□ 0.91
PCF11-207ENST00000624931 SEC62Q99442 399 aaKnown RBP20.71■□□□□ 0.91
PCF11-207ENST00000624931 FIBPO43427 364 aa20.7■□□□□ 0.9
PCF11-207ENST00000624931 KRT85P78386 507 aa20.7■□□□□ 0.9
PCF11-207ENST00000624931 CCDC129Q6ZRS4 1044 aa20.7■□□□□ 0.9
PCF11-207ENST00000624931 ZNF589Q86UQ0 364 aaPredicted RBP20.7■□□□□ 0.9
PCF11-207ENST00000624931 TXNRD3Q86VQ6 643 aa20.7■□□□□ 0.9
PCF11-207ENST00000624931 ANKIB1Q9P2G1 1089 aa20.7■□□□□ 0.9
PCF11-207ENST00000624931 KIF3AQ9Y496 699 aa20.7■□□□□ 0.9
PCF11-207ENST00000624931 MED23Q9ULK4 1368 aa20.7■□□□□ 0.9
PCF11-207ENST00000624931 ZNF804BA4D1E1 1349 aa20.7■□□□□ 0.9
PCF11-207ENST00000624931 PDE6BP35913 854 aa20.7■□□□□ 0.9
PCF11-207ENST00000624931 OLFM4Q6UX06 510 aa20.7■□□□□ 0.9
PCF11-207ENST00000624931 JAKMIP1Q96N16 626 aaKnown RBP20.7■□□□□ 0.9
PCF11-207ENST00000624931 MYH7P12883 1935 aa20.69■□□□□ 0.9
PCF11-207ENST00000624931 IRS2Q9Y4H2 1338 aa20.69■□□□□ 0.9
PCF11-207ENST00000624931 TCHHQ07283 1943 aa20.69■□□□□ 0.9
PCF11-207ENST00000624931 PPEF1O14829 653 aaPredicted RBP20.69■□□□□ 0.9
PCF11-207ENST00000624931 CHRNA5P30532 468 aa20.69■□□□□ 0.9
PCF11-207ENST00000624931 PTH1RQ03431 593 aa20.69■□□□□ 0.9
PCF11-207ENST00000624931 NECTIN1Q15223 517 aa20.69■□□□□ 0.9
PCF11-207ENST00000624931 RNF20Q5VTR2 975 aa20.69■□□□□ 0.9
PCF11-207ENST00000624931 C2CD5Q86YS7 1000 aa20.69■□□□□ 0.9
PCF11-207ENST00000624931 SPATA5Q8NB90 893 aa20.69■□□□□ 0.9
PCF11-207ENST00000624931 FAM84BQ96KN1 310 aaPredicted RBP20.69■□□□□ 0.9
PCF11-207ENST00000624931 NPR1P16066 1061 aa20.68■□□□□ 0.9
PCF11-207ENST00000624931 CCDC83Q8IWF9 413 aa20.68■□□□□ 0.9
PCF11-207ENST00000624931 KIAA1524Q8TCG1 905 aa20.68■□□□□ 0.9
PCF11-207ENST00000624931 LTBP1Q14766 1721 aa20.68■□□□□ 0.9
PCF11-207ENST00000624931 XDHP47989 1333 aa20.68■□□□□ 0.9
PCF11-207ENST00000624931 ZBTB7AO95365 584 aa20.67■□□□□ 0.9
PCF11-207ENST00000624931 CAVIN2O95810 425 aa20.67■□□□□ 0.9
PCF11-207ENST00000624931 FAM200AQ8TCP9 573 aa20.67■□□□□ 0.9
PCF11-207ENST00000624931 SCAND2PQ9GZW5 306 aaPredicted RBP20.67■□□□□ 0.9
PCF11-207ENST00000624931 TTC12Q9H892 705 aaPredicted RBP20.67■□□□□ 0.9
PCF11-207ENST00000624931 DOCK2Q92608 1830 aa20.67■□□□□ 0.9
PCF11-207ENST00000624931 RNF113AO15541 343 aaKnown RBP20.67■□□□□ 0.9
PCF11-207ENST00000624931 BBOX1O75936 387 aa20.67■□□□□ 0.9
PCF11-207ENST00000624931 DNM1Q05193 864 aaKnown RBP20.67■□□□□ 0.9
PCF11-207ENST00000624931 MAP3K11Q16584 847 aa20.67■□□□□ 0.9
PCF11-207ENST00000624931 ZNF622Q969S3 477 aaKnown RBP eCLIP20.67■□□□□ 0.91e-23■□□□□ 10.7
PCF11-207ENST00000624931 PRPF40BQ6NWY9 871 aaKnown RBP20.66■□□□□ 0.9
PCF11-207ENST00000624931 GIMAP6Q6P9H5 292 aa20.66■□□□□ 0.9
PCF11-207ENST00000624931 MASTLQ96GX5 879 aa20.66■□□□□ 0.9
PCF11-207ENST00000624931 MYH13Q9UKX3 1938 aa20.65■□□□□ 0.9
PCF11-207ENST00000624931 C10orf71Q711Q0 1435 aa20.65■□□□□ 0.9
PCF11-207ENST00000624931 M0R2C6 588 aa20.65■□□□□ 0.9
PCF11-207ENST00000624931 UFL1O94874 794 aa20.65■□□□□ 0.9
PCF11-207ENST00000624931 R3HDM1Q15032 1099 aaKnown RBP20.65■□□□□ 0.9
PCF11-207ENST00000624931 ZMYM1Q5SVZ6 1142 aa20.65■□□□□ 0.9
PCF11-207ENST00000624931 LARP1BQ659C4 914 aaKnown RBP20.65■□□□□ 0.9
PCF11-207ENST00000624931 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.65■□□□□ 0.9
PCF11-207ENST00000624931 FBXO33Q7Z6M2 555 aa20.65■□□□□ 0.9
PCF11-207ENST00000624931 VPS37DQ86XT2 251 aa20.65■□□□□ 0.9
PCF11-207ENST00000624931 MAP4K1Q92918 833 aa20.65■□□□□ 0.9
PCF11-207ENST00000624931 NUP62CLQ9H1M0 184 aa20.65■□□□□ 0.9
PCF11-207ENST00000624931 DDX19AQ9NUU7 478 aaKnown RBP20.65■□□□□ 0.9
PCF11-207ENST00000624931 WWC3Q9ULE0 1092 aa20.65■□□□□ 0.9
PCF11-207ENST00000624931 MAST3O60307 1309 aa20.65■□□□□ 0.9
PCF11-207ENST00000624931 IDH1O75874 414 aaKnown RBP20.64■□□□□ 0.9
PCF11-207ENST00000624931 CAVIN4Q5BKX8 364 aa20.64■□□□□ 0.9
PCF11-207ENST00000624931 DUOX1Q9NRD9 1551 aa20.64■□□□□ 0.9
PCF11-207ENST00000624931 CREB3L3Q68CJ9 461 aa20.64■□□□□ 0.89
PCF11-207ENST00000624931 ZNF830Q96NB3 372 aaPredicted RBP20.64■□□□□ 0.89
PCF11-207ENST00000624931 LEMD3Q9Y2U8 911 aa20.64■□□□□ 0.89
PCF11-207ENST00000624931 SLX4Q8IY92 1834 aa20.63■□□□□ 0.89
PCF11-207ENST00000624931 LARGE1O95461 756 aa20.63■□□□□ 0.89
PCF11-207ENST00000624931 TSGA10IPQ3SY00 556 aa20.63■□□□□ 0.89
PCF11-207ENST00000624931 OSBP2Q969R2 916 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms