RNA–Protein interactions for RNA: ENST00000622629.4

MSH6-215, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 4,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-215ENST00000622629 ZHX1Q9UKY1 873 aaPredicted RBP14.75□□□□□ -0.05
MSH6-215ENST00000622629 JAG2Q9Y219 1238 aa14.75□□□□□ -0.05
MSH6-215ENST00000622629 PREX1Q8TCU6 1659 aa14.75□□□□□ -0.05
MSH6-215ENST00000622629 ZNF202O95125 648 aa14.74□□□□□ -0.05
MSH6-215ENST00000622629 EPS15P42566 896 aa14.74□□□□□ -0.05
MSH6-215ENST00000622629 STX17P56962 302 aa14.74□□□□□ -0.05
MSH6-215ENST00000622629 PI16Q6UXB8 463 aa14.74□□□□□ -0.05
MSH6-215ENST00000622629 ZNF444Q8N0Y2 327 aaPredicted RBP14.74□□□□□ -0.05
MSH6-215ENST00000622629 TMTC2Q8N394 836 aa14.74□□□□□ -0.05
MSH6-215ENST00000622629 MYRIPQ8NFW9 859 aa14.74□□□□□ -0.05
MSH6-215ENST00000622629 STX8Q9UNK0 236 aa14.74□□□□□ -0.05
MSH6-215ENST00000622629 ZNF532Q9HCE3 1301 aa14.74□□□□□ -0.05
MSH6-215ENST00000622629 IGSF3O75054 1194 aa14.74□□□□□ -0.05
MSH6-215ENST00000622629 TANGO6Q9C0B7 1094 aa14.74□□□□□ -0.05
MSH6-215ENST00000622629 CASQ1P31415 396 aa14.74□□□□□ -0.05
MSH6-215ENST00000622629 CYP27B1O15528 508 aa14.73□□□□□ -0.05
MSH6-215ENST00000622629 DDB1Q16531 1140 aa14.73□□□□□ -0.05
MSH6-215ENST00000622629 DEF6Q9H4E7 631 aa14.73□□□□□ -0.05
MSH6-215ENST00000622629 PYCARDQ9ULZ3 195 aa14.73□□□□□ -0.05
MSH6-215ENST00000622629 CDC42BPGQ6DT37 1551 aa14.73□□□□□ -0.05
MSH6-215ENST00000622629 DLC1Q96QB1 1528 aa14.73□□□□□ -0.05
MSH6-215ENST00000622629 PRDM1O75626 825 aa14.73□□□□□ -0.05
MSH6-215ENST00000622629 PDIA3P30101 505 aaKnown RBP14.73□□□□□ -0.05
MSH6-215ENST00000622629 CTDSPL2Q05D32 466 aa14.73□□□□□ -0.05
MSH6-215ENST00000622629 SKIDA1Q1XH10 827 aa14.73□□□□□ -0.05
MSH6-215ENST00000622629 KRT40Q6A162 431 aa14.73□□□□□ -0.05
MSH6-215ENST00000622629 VAT1LQ9HCJ6 419 aa14.73□□□□□ -0.05
MSH6-215ENST00000622629 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.73□□□□□ -0.055e-7■■■□□ 15
MSH6-215ENST00000622629 NRBP1Q9UHY1 535 aa14.73□□□□□ -0.05
MSH6-215ENST00000622629 MRVI1Q9Y6F6 885 aa14.73□□□□□ -0.05
MSH6-215ENST00000622629 SH3TC1Q8TE82 1336 aa14.73□□□□□ -0.05
MSH6-215ENST00000622629 TRIM75PA6NK02 468 aa14.73□□□□□ -0.05
MSH6-215ENST00000622629 KRT18P05783 430 aaKnown RBP14.73□□□□□ -0.05
MSH6-215ENST00000622629 NUP88Q99567 741 aaPredicted RBP14.73□□□□□ -0.05
MSH6-215ENST00000622629 ERVV-2B6SEH9 535 aa14.73□□□□□ -0.05
MSH6-215ENST00000622629 MYSM1Q5VVJ2 828 aa14.73□□□□□ -0.05
MSH6-215ENST00000622629 SYT10Q6XYQ8 523 aa14.73□□□□□ -0.05
MSH6-215ENST00000622629 MAP2P11137 1827 aaKnown RBP14.72□□□□□ -0.05
MSH6-215ENST00000622629 ZNF274Q96GC6 653 aaPredicted RBP14.72□□□□□ -0.05
MSH6-215ENST00000622629 ACBD3Q9H3P7 528 aa14.72□□□□□ -0.05
MSH6-215ENST00000622629 CABP5Q9NP86 173 aa14.72□□□□□ -0.05
MSH6-215ENST00000622629 ASAP1Q9ULH1 1129 aa14.72□□□□□ -0.05
MSH6-215ENST00000622629 NEURL4Q96JN8 1562 aa14.72□□□□□ -0.05
MSH6-215ENST00000622629 MAGEB6P1A0A0J9YX57 407 aa14.72□□□□□ -0.05
MSH6-215ENST00000622629 KIF5CO60282 957 aa14.72□□□□□ -0.05
MSH6-215ENST00000622629 PUM3Q15397 648 aaKnown RBP14.72□□□□□ -0.05
MSH6-215ENST00000622629 NSUN7Q8NE18 718 aaKnown RBP14.72□□□□□ -0.05
MSH6-215ENST00000622629 MAST3O60307 1309 aa14.72□□□□□ -0.05
MSH6-215ENST00000622629 N4BP3O15049 544 aa14.72□□□□□ -0.05
MSH6-215ENST00000622629 PDE8AO60658 829 aa14.72□□□□□ -0.05
MSH6-215ENST00000622629 KANK3Q6NY19 840 aa14.72□□□□□ -0.05
MSH6-215ENST00000622629 KRI1Q8N9T8 703 aaKnown RBP14.72□□□□□ -0.05
MSH6-215ENST00000622629 GPHNQ9NQX3 736 aaPredicted RBP14.72□□□□□ -0.05
MSH6-215ENST00000622629 PTPRUQ92729 1446 aa14.72□□□□□ -0.05
MSH6-215ENST00000622629 UBA7P41226 1012 aa14.71□□□□□ -0.05
MSH6-215ENST00000622629 TERF1P54274 439 aa14.71□□□□□ -0.05
MSH6-215ENST00000622629 ZMYM1Q5SVZ6 1142 aa14.71□□□□□ -0.05
MSH6-215ENST00000622629 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.71□□□□□ -0.05
MSH6-215ENST00000622629 DIS3L2Q8IYB7 885 aaKnown RBP14.71□□□□□ -0.05
MSH6-215ENST00000622629 POLR3GO15318 223 aaPredicted RBP14.71□□□□□ -0.05
MSH6-215ENST00000622629 CHGBP05060 677 aa14.71□□□□□ -0.05
MSH6-215ENST00000622629 MYL5Q02045 173 aa14.71□□□□□ -0.05
MSH6-215ENST00000622629 PDE4BQ07343 736 aa14.71□□□□□ -0.05
MSH6-215ENST00000622629 SPATA31D1Q6ZQQ2 1576 aa14.71□□□□□ -0.05
MSH6-215ENST00000622629 ANKARQ7Z5J8 1434 aa14.71□□□□□ -0.05
MSH6-215ENST00000622629 KIAA1328Q86T90 577 aa14.71□□□□□ -0.06
MSH6-215ENST00000622629 NBPF5PQ86XG9 351 aaPredicted RBP14.71□□□□□ -0.06
MSH6-215ENST00000622629 TMEM87BQ96K49 555 aa14.71□□□□□ -0.06
MSH6-215ENST00000622629 KAT14Q9H8E8 782 aa14.71□□□□□ -0.06
MSH6-215ENST00000622629 PCDHA7Q9UN72 937 aa14.71□□□□□ -0.06
MSH6-215ENST00000622629 KCNJ14Q9UNX9 436 aa14.71□□□□□ -0.06
MSH6-215ENST00000622629 ARHGEF28Q8N1W1 1705 aaKnown RBP14.71□□□□□ -0.06
MSH6-215ENST00000622629 ELP1O95163 1332 aa14.71□□□□□ -0.06
MSH6-215ENST00000622629 hCG_1642624A0A1W2PR95 340 aa14.7□□□□□ -0.06
MSH6-215ENST00000622629 TOB2Q14106 344 aaPredicted RBP14.7□□□□□ -0.06
MSH6-215ENST00000622629 CCDC12Q8WUD4 166 aaPredicted RBP14.7□□□□□ -0.06
MSH6-215ENST00000622629 OSBP2Q969R2 916 aa14.7□□□□□ -0.06
MSH6-215ENST00000622629 KCNH3Q9ULD8 1083 aa14.7□□□□□ -0.06
MSH6-215ENST00000622629 SLU7O95391 586 aaKnown RBP14.7□□□□□ -0.06
MSH6-215ENST00000622629 GREM2Q9H772 168 aa14.7□□□□□ -0.06
MSH6-215ENST00000622629 NOM1Q5C9Z4 860 aaKnown RBP14.7□□□□□ -0.06
MSH6-215ENST00000622629 CMTR1Q8N1G2 835 aaKnown RBP14.7□□□□□ -0.06
MSH6-215ENST00000622629 RUFY1Q96T51 708 aa14.7□□□□□ -0.06
MSH6-215ENST00000622629 CRNKL1Q9BZJ0 848 aaKnown RBP14.7□□□□□ -0.06
MSH6-215ENST00000622629 CCDC66A2RUB6 948 aa14.7□□□□□ -0.06
MSH6-215ENST00000622629 ADALQ6DHV7 355 aa14.7□□□□□ -0.06
MSH6-215ENST00000622629 KIF5BP33176 963 aa14.69□□□□□ -0.06
MSH6-215ENST00000622629 LPIN2Q92539 896 aa14.69□□□□□ -0.06
MSH6-215ENST00000622629 ZBTB9Q96C00 473 aa14.69□□□□□ -0.06
MSH6-215ENST00000622629 NCOA3Q9Y6Q9 1424 aa14.69□□□□□ -0.06
MSH6-215ENST00000622629 GNAT2P19087 354 aa14.69□□□□□ -0.06
MSH6-215ENST00000622629 RRAGBQ5VZM2 374 aa14.69□□□□□ -0.06
MSH6-215ENST00000622629 PDLIM2Q96JY6 352 aa14.69□□□□□ -0.06
MSH6-215ENST00000622629 SEC63Q9UGP8 760 aaKnown RBP14.69□□□□□ -0.06
MSH6-215ENST00000622629 KIF13AQ9H1H9 1805 aa14.69□□□□□ -0.06
MSH6-215ENST00000622629 POLR2DO15514 142 aaKnown RBP14.69□□□□□ -0.06
MSH6-215ENST00000622629 FANCCQ00597 558 aa14.69□□□□□ -0.06
MSH6-215ENST00000622629 ZSCAN29Q8IWY8 852 aaPredicted RBP14.69□□□□□ -0.06
MSH6-215ENST00000622629 KIAA1468Q9P260 1216 aa14.69□□□□□ -0.06
MSH6-215ENST00000622629 CLIC4Q9Y696 253 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms