RNA–Protein interactions for RNA: ENST00000622183.1

CPNE3-213, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 156 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-213ENST00000622183 CYP8B1Q9UNU6 501 aa7.58□□□□□ -1.2
CPNE3-213ENST00000622183 ERBB4Q15303 1308 aa7.57□□□□□ -1.2
CPNE3-213ENST00000622183 TERTO14746 1132 aaKnown RBP7.57□□□□□ -1.2
CPNE3-213ENST00000622183 LMNB1P20700 586 aa7.57□□□□□ -1.2
CPNE3-213ENST00000622183 ARNTP27540 789 aa7.57□□□□□ -1.2
CPNE3-213ENST00000622183 RBL2Q08999 1139 aa7.57□□□□□ -1.2
CPNE3-213ENST00000622183 APOBRQ0VD83 1088 aa7.57□□□□□ -1.2
CPNE3-213ENST00000622183 LRRC14Q15048 493 aa7.57□□□□□ -1.2
CPNE3-213ENST00000622183 RASIP1Q5U651 963 aa7.57□□□□□ -1.2
CPNE3-213ENST00000622183 KANK3Q6NY19 840 aa7.57□□□□□ -1.2
CPNE3-213ENST00000622183 MIR1-1HGQ9H1L0 117 aa7.57□□□□□ -1.2
CPNE3-213ENST00000622183 SOX17Q9H6I2 414 aaPredicted RBP7.57□□□□□ -1.2
CPNE3-213ENST00000622183 JPH1Q9HDC5 661 aaPredicted RBP7.57□□□□□ -1.2
CPNE3-213ENST00000622183 UBP1Q9NZI7 540 aa7.57□□□□□ -1.2
CPNE3-213ENST00000622183 EFR3BQ9Y2G0 817 aa7.57□□□□□ -1.2
CPNE3-213ENST00000622183 ROBO2Q9HCK4 1378 aa7.57□□□□□ -1.2
CPNE3-213ENST00000622183 SOX1O00570 391 aaPredicted RBP7.56□□□□□ -1.2
CPNE3-213ENST00000622183 EIF4EBP3O60516 100 aaPredicted RBP7.56□□□□□ -1.2
CPNE3-213ENST00000622183 ALBP02768 609 aa7.56□□□□□ -1.2
CPNE3-213ENST00000622183 CRKP46108 304 aa7.56□□□□□ -1.2
CPNE3-213ENST00000622183 BAG6P46379 1132 aa7.56□□□□□ -1.2
CPNE3-213ENST00000622183 SOX9P48436 509 aa7.56□□□□□ -1.2
CPNE3-213ENST00000622183 NASPP49321 788 aaPredicted RBP7.56□□□□□ -1.2
CPNE3-213ENST00000622183 KRT76Q01546 638 aa7.56□□□□□ -1.2
CPNE3-213ENST00000622183 AP3B2Q13367 1082 aa7.56□□□□□ -1.2
CPNE3-213ENST00000622183 SCARA3Q6AZY7 606 aa7.56□□□□□ -1.2
CPNE3-213ENST00000622183 IL22RA1Q8N6P7 574 aa7.56□□□□□ -1.2
CPNE3-213ENST00000622183 STK35Q8TDR2 534 aa7.56□□□□□ -1.2
CPNE3-213ENST00000622183 SLC16A10Q8TF71 515 aa7.56□□□□□ -1.2
CPNE3-213ENST00000622183 ACDQ96AP0 544 aa7.56□□□□□ -1.2
CPNE3-213ENST00000622183 HIRIP3Q9BW71 556 aaPredicted RBP7.56□□□□□ -1.2
CPNE3-213ENST00000622183 EMILIN2Q9BXX0 1053 aa7.56□□□□□ -1.2
CPNE3-213ENST00000622183 LRRC3Q9BY71 257 aa7.56□□□□□ -1.2
CPNE3-213ENST00000622183 GINM1Q9NU53 330 aa7.56□□□□□ -1.2
CPNE3-213ENST00000622183 FAM221AA4D161 298 aa7.55□□□□□ -1.2
CPNE3-213ENST00000622183 ADAMTS2O95450 1211 aa7.55□□□□□ -1.2
CPNE3-213ENST00000622183 F13A1P00488 732 aa7.55□□□□□ -1.2
CPNE3-213ENST00000622183 AFF1P51825 1210 aaKnown RBP7.55□□□□□ -1.2
CPNE3-213ENST00000622183 PIP4K2BP78356 416 aa7.55□□□□□ -1.2
CPNE3-213ENST00000622183 ZNF252P-AS1Q0IIN9 211 aa7.55□□□□□ -1.2
CPNE3-213ENST00000622183 LLGL2Q6P1M3 1020 aa7.55□□□□□ -1.2
CPNE3-213ENST00000622183 BNC2Q6ZN30 1099 aaPredicted RBP7.55□□□□□ -1.2
CPNE3-213ENST00000622183 SLITRK4Q8IW52 837 aa7.55□□□□□ -1.2
CPNE3-213ENST00000622183 GATAD2BQ8WXI9 593 aa7.55□□□□□ -1.2
CPNE3-213ENST00000622183 IRF7Q92985 503 aa7.55□□□□□ -1.2
CPNE3-213ENST00000622183 WNT8BQ93098 351 aa7.55□□□□□ -1.2
CPNE3-213ENST00000622183 STRIP2Q9ULQ0 834 aa7.55□□□□□ -1.2
CPNE3-213ENST00000622183 PPME1Q9Y570 386 aa7.55□□□□□ -1.2
CPNE3-213ENST00000622183 PCDHB5Q9Y5E4 795 aa7.55□□□□□ -1.2
CPNE3-213ENST00000622183 LILRB5O75023 590 aa7.54□□□□□ -1.2
CPNE3-213ENST00000622183 STK10O94804 968 aaKnown RBP7.54□□□□□ -1.2
CPNE3-213ENST00000622183 SOGA3Q5TF21 947 aa7.54□□□□□ -1.2
CPNE3-213ENST00000622183 C1orf229Q6ZS94 237 aaPredicted RBP7.54□□□□□ -1.2
CPNE3-213ENST00000622183 DPH6Q7L8W6 267 aa7.54□□□□□ -1.2
CPNE3-213ENST00000622183 PDZD3Q86UT5 571 aa7.54□□□□□ -1.2
CPNE3-213ENST00000622183 CILPO75339 1184 aa7.53□□□□□ -1.2
CPNE3-213ENST00000622183 C19orf57Q0VDD7 668 aa7.53□□□□□ -1.2
CPNE3-213ENST00000622183 SEPT6Q14141 434 aa7.53□□□□□ -1.2
CPNE3-213ENST00000622183 DIEXFQ68CQ4 756 aaKnown RBP7.53□□□□□ -1.2
CPNE3-213ENST00000622183 ZNF787Q6DD87 383 aa7.53□□□□□ -1.2
CPNE3-213ENST00000622183 FAM117BQ6P1L5 589 aa7.53□□□□□ -1.2
CPNE3-213ENST00000622183 GRIN3AQ8TCU5 1115 aa7.53□□□□□ -1.2
CPNE3-213ENST00000622183 EDARADDQ8WWZ3 215 aa7.53□□□□□ -1.2
CPNE3-213ENST00000622183 NKD1Q969G9 470 aa7.53□□□□□ -1.2
CPNE3-213ENST00000622183 GAL3ST3Q96A11 431 aa7.53□□□□□ -1.2
CPNE3-213ENST00000622183 LNPKQ9C0E8 428 aa7.53□□□□□ -1.2
CPNE3-213ENST00000622183 CBX8Q9HC52 389 aa7.53□□□□□ -1.2
CPNE3-213ENST00000622183 PRDM6Q9NQX0 595 aa7.53□□□□□ -1.2
CPNE3-213ENST00000622183 LRRC4BQ9NT99 713 aa7.53□□□□□ -1.2
CPNE3-213ENST00000622183 M0R082 166 aa7.52□□□□□ -1.21
CPNE3-213ENST00000622183 OIP5O43482 229 aa7.52□□□□□ -1.21
CPNE3-213ENST00000622183 TRIM37O94972 964 aa7.52□□□□□ -1.21
CPNE3-213ENST00000622183 SSBP05455 408 aaKnown RBP eCLIP7.52□□□□□ -1.21
CPNE3-213ENST00000622183 GSTP1P09211 210 aaKnown RBP7.52□□□□□ -1.21
CPNE3-213ENST00000622183 CDC25BP30305 580 aa7.52□□□□□ -1.21
CPNE3-213ENST00000622183 ARL4DP49703 201 aa7.52□□□□□ -1.21
CPNE3-213ENST00000622183 MPP2Q14168 576 aa7.52□□□□□ -1.21
CPNE3-213ENST00000622183 SEZ6Q53EL9 994 aa7.52□□□□□ -1.21
CPNE3-213ENST00000622183 CHSY3Q70JA7 882 aa7.52□□□□□ -1.21
CPNE3-213ENST00000622183 WFDC8Q8IUA0 241 aa7.52□□□□□ -1.21
CPNE3-213ENST00000622183 FBXO27Q8NI29 283 aa7.52□□□□□ -1.21
CPNE3-213ENST00000622183 ZNF417Q8TAU3 575 aa7.52□□□□□ -1.21
CPNE3-213ENST00000622183 ZNF587Q96SQ5 575 aaPredicted RBP7.52□□□□□ -1.21
CPNE3-213ENST00000622183 OSGEPQ9NPF4 335 aa7.52□□□□□ -1.21
CPNE3-213ENST00000622183 CACNA2D2Q9NY47 1150 aa7.52□□□□□ -1.21
CPNE3-213ENST00000622183 LINC01387J3KSC0 135 aa7.51□□□□□ -1.21
CPNE3-213ENST00000622183 TLR3O15455 904 aaKnown RBP7.51□□□□□ -1.21
CPNE3-213ENST00000622183 CYP11A1P05108 521 aa7.51□□□□□ -1.21
CPNE3-213ENST00000622183 SLURP2P0DP57 97 aa7.51□□□□□ -1.21
CPNE3-213ENST00000622183 GSTM4Q03013 218 aa7.51□□□□□ -1.21
CPNE3-213ENST00000622183 CWF19L2Q2TBE0 894 aaKnown RBP7.51□□□□□ -1.21
CPNE3-213ENST00000622183 HGSNATQ68CP4 663 aa7.51□□□□□ -1.21
CPNE3-213ENST00000622183 TXNDC11Q6PKC3 985 aa7.51□□□□□ -1.21
CPNE3-213ENST00000622183 GALNT6Q8NCL4 622 aa7.51□□□□□ -1.21
CPNE3-213ENST00000622183 SLC7A3Q8WY07 619 aa7.51□□□□□ -1.21
CPNE3-213ENST00000622183 JARID2Q92833 1246 aaPredicted RBP7.51□□□□□ -1.21
CPNE3-213ENST00000622183 BTBD6Q96KE9 485 aa7.51□□□□□ -1.21
CPNE3-213ENST00000622183 NRSN2Q9GZP1 204 aa7.51□□□□□ -1.21
CPNE3-213ENST00000622183 FSCN2O14926 492 aa7.5□□□□□ -1.21
CPNE3-213ENST00000622183 PTPN11Q06124 597 aaPredicted RBP7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms