RNA–Protein interactions for RNA: ENST00000622089.4

ITSN2-213, Transcript of intersectin 2, humanhuman

TSL 5 BASIC

Gene ITSN2, Length 5,805 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN2-213ENST00000622089 ZEB2O60315 1214 aa10.46□□□□□ -0.74
ITSN2-213ENST00000622089 EPB41P11171 864 aaKnown RBP10.46□□□□□ -0.74
ITSN2-213ENST00000622089 CREB3L3Q68CJ9 461 aa10.46□□□□□ -0.74
ITSN2-213ENST00000622089 DHX32Q7L7V1 743 aaKnown RBP10.46□□□□□ -0.74
ITSN2-213ENST00000622089 AFAP1L2Q8N4X5 818 aa10.46□□□□□ -0.74
ITSN2-213ENST00000622089 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.46□□□□□ -0.74
ITSN2-213ENST00000622089 NYXQ9GZU5 481 aa10.46□□□□□ -0.74
ITSN2-213ENST00000622089 LZTFL1Q9NQ48 299 aa10.46□□□□□ -0.74
ITSN2-213ENST00000622089 AMOTL2Q9Y2J4 779 aa10.46□□□□□ -0.74
ITSN2-213ENST00000622089 USH1CQ9Y6N9 552 aa10.46□□□□□ -0.74
ITSN2-213ENST00000622089 PTPDC1A2A3K4 754 aa10.46□□□□□ -0.74
ITSN2-213ENST00000622089 RHOXF2BP0C7M4 288 aa10.46□□□□□ -0.74
ITSN2-213ENST00000622089 FAM160A1Q05DH4 1040 aa10.46□□□□□ -0.74
ITSN2-213ENST00000622089 CCDC122Q5T0U0 273 aa10.46□□□□□ -0.74
ITSN2-213ENST00000622089 TSHZ3Q63HK5 1081 aa10.46□□□□□ -0.74
ITSN2-213ENST00000622089 SKAP1Q86WV1 359 aa10.46□□□□□ -0.74
ITSN2-213ENST00000622089 RHOXF2Q9BQY4 288 aa10.46□□□□□ -0.74
ITSN2-213ENST00000622089 KIF3CO14782 793 aa10.45□□□□□ -0.74
ITSN2-213ENST00000622089 GJC1P36383 396 aa10.45□□□□□ -0.74
ITSN2-213ENST00000622089 AK2P54819 239 aa10.45□□□□□ -0.74
ITSN2-213ENST00000622089 SV2BQ7L1I2 683 aa10.45□□□□□ -0.74
ITSN2-213ENST00000622089 RPUSD2Q8IZ73 545 aaKnown RBP10.45□□□□□ -0.74
ITSN2-213ENST00000622089 SMC1BQ8NDV3 1235 aa10.45□□□□□ -0.74
ITSN2-213ENST00000622089 VCX3BQ9H321 246 aa10.45□□□□□ -0.74
ITSN2-213ENST00000622089 FRMD4BQ9Y2L6 1034 aa10.45□□□□□ -0.74
ITSN2-213ENST00000622089 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.45□□□□□ -0.74
ITSN2-213ENST00000622089 CD109Q6YHK3 1445 aa10.45□□□□□ -0.74
ITSN2-213ENST00000622089 AKAP4Q5JQC9 854 aa10.45□□□□□ -0.74
ITSN2-213ENST00000622089 NBPF6Q5VWK0 638 aa10.45□□□□□ -0.74
ITSN2-213ENST00000622089 IFT20Q8IY31 132 aa10.45□□□□□ -0.74
ITSN2-213ENST00000622089 IQCDQ96DY2 449 aa10.45□□□□□ -0.74
ITSN2-213ENST00000622089 NBPF4Q96M43 638 aa10.45□□□□□ -0.74
ITSN2-213ENST00000622089 CPSF2Q9P2I0 782 aaKnown RBP10.45□□□□□ -0.74
ITSN2-213ENST00000622089 TSKSQ9UJT2 592 aa10.45□□□□□ -0.74
ITSN2-213ENST00000622089 RFC4P35249 363 aa10.45□□□□□ -0.74
ITSN2-213ENST00000622089 MAP7Q14244 749 aa10.45□□□□□ -0.74
ITSN2-213ENST00000622089 ARHGAP24Q8N264 748 aa10.45□□□□□ -0.74
ITSN2-213ENST00000622089 PLCB1Q9NQ66 1216 aa10.45□□□□□ -0.74
ITSN2-213ENST00000622089 CHPF2Q9P2E5 772 aa10.45□□□□□ -0.74
ITSN2-213ENST00000622089 UTP11Q9Y3A2 253 aaKnown RBP10.45□□□□□ -0.74
ITSN2-213ENST00000622089 ADGRF5Q8IZF2 1346 aa10.45□□□□□ -0.74
ITSN2-213ENST00000622089 ARHGAP25P42331 645 aa10.45□□□□□ -0.74
ITSN2-213ENST00000622089 EVCP57679 992 aa10.45□□□□□ -0.74
ITSN2-213ENST00000622089 C8orf34Q49A92 452 aa10.45□□□□□ -0.74
ITSN2-213ENST00000622089 SLC9C2Q5TAH2 1124 aa10.45□□□□□ -0.74
ITSN2-213ENST00000622089 TAOK1Q7L7X3 1001 aa10.45□□□□□ -0.74
ITSN2-213ENST00000622089 KRT28Q7Z3Y7 464 aa10.45□□□□□ -0.74
ITSN2-213ENST00000622089 NBPF5PQ86XG9 351 aaPredicted RBP10.45□□□□□ -0.74
ITSN2-213ENST00000622089 MEIS3Q99687 375 aa10.45□□□□□ -0.74
ITSN2-213ENST00000622089 LLPHQ9BRT6 129 aaKnown RBP10.45□□□□□ -0.74
ITSN2-213ENST00000622089 CALUO43852 315 aaPredicted RBP10.45□□□□□ -0.74
ITSN2-213ENST00000622089 GABPB1Q06547 395 aaPredicted RBP10.45□□□□□ -0.74
ITSN2-213ENST00000622089 INF2Q27J81 1249 aa10.45□□□□□ -0.74
ITSN2-213ENST00000622089 CNNM4Q6P4Q7 775 aa10.45□□□□□ -0.74
ITSN2-213ENST00000622089 ZFYVE9O95405 1425 aa10.44□□□□□ -0.74
ITSN2-213ENST00000622089 ERCC5P28715 1186 aaPredicted RBP10.44□□□□□ -0.74
ITSN2-213ENST00000622089 UBL4BQ8N7F7 174 aa10.44□□□□□ -0.74
ITSN2-213ENST00000622089 ARID5AQ03989 594 aa10.44□□□□□ -0.74
ITSN2-213ENST00000622089 CEP85LQ5SZL2 805 aa10.44□□□□□ -0.74
ITSN2-213ENST00000622089 AOX1Q06278 1338 aa10.44□□□□□ -0.74
ITSN2-213ENST00000622089 POLR3AO14802 1390 aaPredicted RBP10.44□□□□□ -0.74
ITSN2-213ENST00000622089 CASQ2O14958 399 aaPredicted RBP10.44□□□□□ -0.74
ITSN2-213ENST00000622089 MTMR3Q13615 1198 aa10.44□□□□□ -0.74
ITSN2-213ENST00000622089 NEDD9Q14511 834 aa10.44□□□□□ -0.74
ITSN2-213ENST00000622089 TSNAXIP1Q2TAA8 658 aa10.44□□□□□ -0.74
ITSN2-213ENST00000622089 DNAJC21Q5F1R6 531 aaKnown RBP10.44□□□□□ -0.74
ITSN2-213ENST00000622089 LIN9Q5TKA1 542 aa10.44□□□□□ -0.74
ITSN2-213ENST00000622089 RUFY4Q6ZNE9 571 aa10.44□□□□□ -0.74
ITSN2-213ENST00000622089 CCT6BQ92526 530 aa10.44□□□□□ -0.74
ITSN2-213ENST00000622089 DCTPP1Q9H773 170 aa10.44□□□□□ -0.74
ITSN2-213ENST00000622089 CC2D2AQ9P2K1 1620 aa10.44□□□□□ -0.74
ITSN2-213ENST00000622089 ABCA10Q8WWZ4 1543 aa10.44□□□□□ -0.74
ITSN2-213ENST00000622089 TERF1P54274 439 aa10.44□□□□□ -0.74
ITSN2-213ENST00000622089 WDR44Q5JSH3 913 aa10.44□□□□□ -0.74
ITSN2-213ENST00000622089 VPS52Q8N1B4 723 aa10.44□□□□□ -0.74
ITSN2-213ENST00000622089 LRRC2Q9BYS8 371 aa10.44□□□□□ -0.74
ITSN2-213ENST00000622089 RILPL1Q5EBL4 403 aa10.43□□□□□ -0.74
ITSN2-213ENST00000622089 C8orf74Q6P047 294 aa10.43□□□□□ -0.74
ITSN2-213ENST00000622089 ANKRD2Q9GZV1 360 aa10.43□□□□□ -0.74
ITSN2-213ENST00000622089 HSP90AA4PQ58FG1 418 aa10.43□□□□□ -0.74
ITSN2-213ENST00000622089 KRBA2Q6ZNG9 492 aa10.43□□□□□ -0.74
ITSN2-213ENST00000622089 GLT8D2Q9H1C3 349 aa10.43□□□□□ -0.74
ITSN2-213ENST00000622089 SETSIPP0DME0 302 aa10.43□□□□□ -0.74
ITSN2-213ENST00000622089 MCM7P33993 719 aa10.43□□□□□ -0.74
ITSN2-213ENST00000622089 CCDC25Q86WR0 208 aa10.43□□□□□ -0.74
ITSN2-213ENST00000622089 C10orf67Q8IYJ2 551 aa10.43□□□□□ -0.74
ITSN2-213ENST00000622089 XAGE3Q8WTP9 111 aa10.43□□□□□ -0.74
ITSN2-213ENST00000622089 SMIM23A6NLE4 172 aa10.43□□□□□ -0.74
ITSN2-213ENST00000622089 TRPC3Q13507 836 aa10.43□□□□□ -0.74
ITSN2-213ENST00000622089 ASIC2Q16515 512 aa10.43□□□□□ -0.74
ITSN2-213ENST00000622089 PPP1R9BQ96SB3 815 aa10.43□□□□□ -0.74
ITSN2-213ENST00000622089 NOC4LQ9BVI4 516 aaKnown RBP10.43□□□□□ -0.74
ITSN2-213ENST00000622089 VCXQ9H320 206 aa10.43□□□□□ -0.74
ITSN2-213ENST00000622089 CTNND2Q9UQB3 1225 aa10.43□□□□□ -0.74
ITSN2-213ENST00000622089 TLDC2A0PJX2 215 aa10.43□□□□□ -0.74
ITSN2-213ENST00000622089 STK10O94804 968 aaKnown RBP10.43□□□□□ -0.74
ITSN2-213ENST00000622089 VIMP08670 466 aaKnown RBP10.43□□□□□ -0.74
ITSN2-213ENST00000622089 MIPOL1Q8TD10 442 aa10.43□□□□□ -0.74
ITSN2-213ENST00000622089 FCHSD1Q86WN1 690 aa10.42□□□□□ -0.74
ITSN2-213ENST00000622089 NOX5Q96PH1 765 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms