RNA–Protein interactions for RNA: ENST00000618621.4

LPP-221, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

TSL 1 (best) BASIC

Gene LPP, Length 18,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-221ENST00000618621 LDHAL6AQ6ZMR3 332 aa3.45□□□□□ -1.86
LPP-221ENST00000618621 NUP160Q12769 1436 aa3.45□□□□□ -1.86
LPP-221ENST00000618621 SLC27A2O14975 620 aa3.45□□□□□ -1.86
LPP-221ENST00000618621 SPOUT1Q5T280 376 aaKnown RBP3.45□□□□□ -1.86
LPP-221ENST00000618621 CFAP58Q5T655 872 aa3.45□□□□□ -1.86
LPP-221ENST00000618621 RRP36Q96EU6 259 aaKnown RBP3.45□□□□□ -1.86
LPP-221ENST00000618621 TMOD3Q9NYL9 352 aa3.45□□□□□ -1.86
LPP-221ENST00000618621 TSKSQ9UJT2 592 aa3.45□□□□□ -1.86
LPP-221ENST00000618621 EHBP1L1Q8N3D4 1523 aa3.45□□□□□ -1.86
LPP-221ENST00000618621 CCDC141Q6ZP82 1450 aa3.45□□□□□ -1.86
LPP-221ENST00000618621 ECM2O94769 699 aaPredicted RBP3.45□□□□□ -1.86
LPP-221ENST00000618621 CCDC40Q4G0X9 1142 aa3.45□□□□□ -1.86
LPP-221ENST00000618621 CRNKL1Q9BZJ0 848 aaKnown RBP3.45□□□□□ -1.86
LPP-221ENST00000618621 KLF18A0A0U1RQI7 1052 aa3.45□□□□□ -1.86
LPP-221ENST00000618621 GNA11P29992 359 aa3.45□□□□□ -1.86
LPP-221ENST00000618621 GIGYF2Q6Y7W6 1299 aaKnown RBP3.45□□□□□ -1.86
LPP-221ENST00000618621 LRRC2Q9BYS8 371 aa3.45□□□□□ -1.86
LPP-221ENST00000618621 SLC24A3Q9HC58 644 aa3.45□□□□□ -1.86
LPP-221ENST00000618621 ZSWIM6Q9HCJ5 1215 aa3.45□□□□□ -1.86
LPP-221ENST00000618621 SNX14Q9Y5W7 946 aa3.45□□□□□ -1.86
LPP-221ENST00000618621 NLRP12P59046 1061 aa3.45□□□□□ -1.86
LPP-221ENST00000618621 ERCC6LQ2NKX8 1250 aa3.45□□□□□ -1.86
LPP-221ENST00000618621 SYCP3Q8IZU3 236 aa3.45□□□□□ -1.86
LPP-221ENST00000618621 MPHOSPH10O00566 681 aaKnown RBP3.45□□□□□ -1.86
LPP-221ENST00000618621 SGSM2O43147 1006 aa3.45□□□□□ -1.86
LPP-221ENST00000618621 ATP8B1O43520 1251 aa3.45□□□□□ -1.86
LPP-221ENST00000618621 SLC9C2Q5TAH2 1124 aa3.45□□□□□ -1.86
LPP-221ENST00000618621 NOX5Q96PH1 765 aa3.45□□□□□ -1.86
LPP-221ENST00000618621 EYA1Q99502 592 aa3.45□□□□□ -1.86
LPP-221ENST00000618621 SWAP70Q9UH65 585 aa3.45□□□□□ -1.86
LPP-221ENST00000618621 ZNF215Q9UL58 517 aaPredicted RBP3.45□□□□□ -1.86
LPP-221ENST00000618621 STAMBPO95630 424 aa3.44□□□□□ -1.86
LPP-221ENST00000618621 ZBTB16Q05516 673 aa3.44□□□□□ -1.86
LPP-221ENST00000618621 PDLIM2Q96JY6 352 aa3.44□□□□□ -1.86
LPP-221ENST00000618621 DDX41Q9UJV9 622 aaKnown RBP3.44□□□□□ -1.86
LPP-221ENST00000618621 IKBKGQ9Y6K9 419 aa3.44□□□□□ -1.86
LPP-221ENST00000618621 RAD50Q92878 1312 aa3.44□□□□□ -1.86
LPP-221ENST00000618621 TBC1D8BQ0IIM8 1120 aa3.44□□□□□ -1.86
LPP-221ENST00000618621 MSL1Q68DK7 614 aa3.44□□□□□ -1.86
LPP-221ENST00000618621 TMTC1Q8IUR5 882 aa3.44□□□□□ -1.86
LPP-221ENST00000618621 ATRIPQ8WXE1 791 aa3.44□□□□□ -1.86
LPP-221ENST00000618621 PRDM4Q9UKN5 801 aa3.44□□□□□ -1.86
LPP-221ENST00000618621 UTP11Q9Y3A2 253 aaKnown RBP3.44□□□□□ -1.86
LPP-221ENST00000618621 NBPF11Q86T75 865 aa3.44□□□□□ -1.86
LPP-221ENST00000618621 CNGA4Q8IV77 575 aa3.44□□□□□ -1.86
LPP-221ENST00000618621 IFNL2Q8IZJ0 200 aa3.44□□□□□ -1.86
LPP-221ENST00000618621 PLVAPQ9BX97 442 aa3.44□□□□□ -1.86
LPP-221ENST00000618621 SNRKQ9NRH2 765 aa3.44□□□□□ -1.86
LPP-221ENST00000618621 EIF4A2Q14240 407 aaKnown RBP3.44□□□□□ -1.86
LPP-221ENST00000618621 H7C1D1 291 aa3.44□□□□□ -1.86
LPP-221ENST00000618621 ADALQ6DHV7 355 aa3.44□□□□□ -1.86
LPP-221ENST00000618621 V9GY48 417 aaPredicted RBP3.44□□□□□ -1.86
LPP-221ENST00000618621 NPHP3Q7Z494 1330 aa3.44□□□□□ -1.86
LPP-221ENST00000618621 UBE4AQ14139 1066 aa3.44□□□□□ -1.86
LPP-221ENST00000618621 HLTFQ14527 1009 aaKnown RBP eCLIP3.44□□□□□ -1.86
LPP-221ENST00000618621 IFNLR1Q8IU57 520 aaPredicted RBP3.44□□□□□ -1.86
LPP-221ENST00000618621 USP44Q9H0E7 712 aa3.44□□□□□ -1.86
LPP-221ENST00000618621 GLT8D2Q9H1C3 349 aa3.44□□□□□ -1.86
LPP-221ENST00000618621 KAT14Q9H8E8 782 aa3.44□□□□□ -1.86
LPP-221ENST00000618621 PAG1Q9NWQ8 432 aa3.44□□□□□ -1.86
LPP-221ENST00000618621 JAK2O60674 1132 aa3.44□□□□□ -1.86
LPP-221ENST00000618621 CLUL1Q15846 466 aa3.44□□□□□ -1.86
LPP-221ENST00000618621 CCDC152Q4G0S7 254 aa3.44□□□□□ -1.86
LPP-221ENST00000618621 KRT79Q5XKE5 535 aa3.44□□□□□ -1.86
LPP-221ENST00000618621 ZCRB1Q8TBF4 217 aaKnown RBP3.44□□□□□ -1.86
LPP-221ENST00000618621 CCDC113Q9H0I3 377 aa3.44□□□□□ -1.86
LPP-221ENST00000618621 TTF2Q9UNY4 1162 aaKnown RBP3.44□□□□□ -1.86
LPP-221ENST00000618621 PTPN23Q9H3S7 1636 aa3.44□□□□□ -1.86
LPP-221ENST00000618621 LZTS3O60299 673 aaPredicted RBP3.44□□□□□ -1.86
LPP-221ENST00000618621 PRPF4BQ13523 1007 aaKnown RBP3.44□□□□□ -1.86
LPP-221ENST00000618621 PALD1Q9ULE6 856 aa3.44□□□□□ -1.86
LPP-221ENST00000618621 CDC25BP30305 580 aa3.44□□□□□ -1.86
LPP-221ENST00000618621 ALDH3A1P30838 453 aa3.44□□□□□ -1.86
LPP-221ENST00000618621 ACTN2P35609 894 aa3.44□□□□□ -1.86
LPP-221ENST00000618621 ZSCAN26Q16670 478 aa3.44□□□□□ -1.86
LPP-221ENST00000618621 CCDC157Q569K6 752 aa3.44□□□□□ -1.86
LPP-221ENST00000618621 FAM173BQ6P4H8 233 aa3.44□□□□□ -1.86
LPP-221ENST00000618621 TMEM87AQ8NBN3 555 aa3.44□□□□□ -1.86
LPP-221ENST00000618621 NAP1L4Q99733 375 aaKnown RBP3.44□□□□□ -1.86
LPP-221ENST00000618621 VGLL3A8MV65 326 aa3.44□□□□□ -1.86
LPP-221ENST00000618621 PPP2R5EQ16537 467 aa3.44□□□□□ -1.86
LPP-221ENST00000618621 DTHD1Q6ZMT9 781 aa3.44□□□□□ -1.86
LPP-221ENST00000618621 CEP128Q6ZU80 1094 aa3.44□□□□□ -1.86
LPP-221ENST00000618621 AOPEPQ8N6M6 819 aa3.44□□□□□ -1.86
LPP-221ENST00000618621 IP6K1Q92551 441 aa3.44□□□□□ -1.86
LPP-221ENST00000618621 DHX58Q96C10 678 aa3.44□□□□□ -1.86
LPP-221ENST00000618621 IQCDQ96DY2 449 aa3.44□□□□□ -1.86
LPP-221ENST00000618621 MAK16Q9BXY0 300 aaKnown RBP3.44□□□□□ -1.86
LPP-221ENST00000618621 C19orf44Q9H6X5 657 aa3.44□□□□□ -1.86
LPP-221ENST00000618621 A2MP01023 1474 aa3.44□□□□□ -1.86
LPP-221ENST00000618621 A0A1W2PRG0 241 aa3.44□□□□□ -1.86
LPP-221ENST00000618621 HAND2P61296 217 aa3.44□□□□□ -1.86
LPP-221ENST00000618621 PPM1EQ8WY54 764 aa3.44□□□□□ -1.86
LPP-221ENST00000618621 GTF3C6Q969F1 213 aa3.44□□□□□ -1.86
LPP-221ENST00000618621 CCDC114Q96M63 670 aa3.44□□□□□ -1.86
LPP-221ENST00000618621 NSRP1Q9H0G5 558 aaKnown RBP3.44□□□□□ -1.86
LPP-221ENST00000618621 TMOD2Q9NZR1 351 aa3.44□□□□□ -1.86
LPP-221ENST00000618621 FANCCQ00597 558 aa3.44□□□□□ -1.86
LPP-221ENST00000618621 IFT81Q8WYA0 676 aa3.44□□□□□ -1.86
LPP-221ENST00000618621 LZTS2Q9BRK4 669 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms