RNA–Protein interactions for RNA: ENST00000617103.4

CLTCL1-209, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,859 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-209ENST00000617103 CYP7A1P22680 504 aa12□□□□□ -0.49
CLTCL1-209ENST00000617103 ATP11AP98196 1134 aa12□□□□□ -0.49
CLTCL1-209ENST00000617103 IFT20Q8IY31 132 aa12□□□□□ -0.49
CLTCL1-209ENST00000617103 CABS1Q96KC9 395 aa12□□□□□ -0.49
CLTCL1-209ENST00000617103 NKIRAS1Q9NYS0 192 aa12□□□□□ -0.49
CLTCL1-209ENST00000617103 PLB1Q6P1J6 1458 aa12□□□□□ -0.49
CLTCL1-209ENST00000617103 INSRP06213 1382 aa12□□□□□ -0.49
CLTCL1-209ENST00000617103 KRT79Q5XKE5 535 aa12□□□□□ -0.49
CLTCL1-209ENST00000617103 RUFY4Q6ZNE9 571 aa12□□□□□ -0.49
CLTCL1-209ENST00000617103 HEATR3Q7Z4Q2 680 aa12□□□□□ -0.49
CLTCL1-209ENST00000617103 LMNTD2Q8IXW0 634 aa12□□□□□ -0.49
CLTCL1-209ENST00000617103 ZRANB1Q9UGI0 708 aa12□□□□□ -0.49
CLTCL1-209ENST00000617103 ZNF215Q9UL58 517 aaPredicted RBP12□□□□□ -0.49
CLTCL1-209ENST00000617103 ZMYM4Q5VZL5 1548 aa12□□□□□ -0.49
CLTCL1-209ENST00000617103 ZMYM3Q14202 1370 aa11.99□□□□□ -0.49
CLTCL1-209ENST00000617103 RTL9Q8NET4 1388 aa11.99□□□□□ -0.49
CLTCL1-209ENST00000617103 ACEP12821 1306 aa11.99□□□□□ -0.49
CLTCL1-209ENST00000617103 DTHD1Q6ZMT9 781 aa11.99□□□□□ -0.49
CLTCL1-209ENST00000617103 LRRC45Q96CN5 670 aa11.99□□□□□ -0.49
CLTCL1-209ENST00000617103 VPS16Q9H269 839 aa11.99□□□□□ -0.49
CLTCL1-209ENST00000617103 MTUS1Q9ULD2 1270 aa11.99□□□□□ -0.49
CLTCL1-209ENST00000617103 SLC27A2O14975 620 aa11.99□□□□□ -0.49
CLTCL1-209ENST00000617103 ERCC6LQ2NKX8 1250 aa11.99□□□□□ -0.49
CLTCL1-209ENST00000617103 CCDC25Q86WR0 208 aa11.99□□□□□ -0.49
CLTCL1-209ENST00000617103 MAP2K2P36507 400 aa11.99□□□□□ -0.49
CLTCL1-209ENST00000617103 KRT24Q2M2I5 525 aa11.99□□□□□ -0.49
CLTCL1-209ENST00000617103 KIAA1524Q8TCG1 905 aa11.99□□□□□ -0.49
CLTCL1-209ENST00000617103 NESP48681 1621 aa11.99□□□□□ -0.49
CLTCL1-209ENST00000617103 ZNF202O95125 648 aa11.99□□□□□ -0.49
CLTCL1-209ENST00000617103 SARNPP82979 210 aaKnown RBP11.99□□□□□ -0.49
CLTCL1-209ENST00000617103 GSTA5Q7RTV2 222 aa11.99□□□□□ -0.49
CLTCL1-209ENST00000617103 KLHL34Q8N239 644 aa11.99□□□□□ -0.49
CLTCL1-209ENST00000617103 CARD14Q9BXL6 1004 aa11.99□□□□□ -0.49
CLTCL1-209ENST00000617103 NFE2L3Q9Y4A8 694 aa11.99□□□□□ -0.49
CLTCL1-209ENST00000617103 SBNO2Q9Y2G9 1366 aa11.99□□□□□ -0.49
CLTCL1-209ENST00000617103 ATP5DP30049 168 aa11.98□□□□□ -0.49
CLTCL1-209ENST00000617103 PCK1P35558 622 aa11.98□□□□□ -0.49
CLTCL1-209ENST00000617103 DMTNQ08495 405 aa11.98□□□□□ -0.49
CLTCL1-209ENST00000617103 JAKMIP2Q96AA8 810 aa11.98□□□□□ -0.49
CLTCL1-209ENST00000617103 MSH6P52701 1360 aa11.98□□□□□ -0.49
CLTCL1-209ENST00000617103 GNAT2P19087 354 aa11.98□□□□□ -0.49
CLTCL1-209ENST00000617103 NAPAP54920 295 aa11.98□□□□□ -0.49
CLTCL1-209ENST00000617103 EIF4A2Q14240 407 aaKnown RBP11.98□□□□□ -0.49
CLTCL1-209ENST00000617103 PHACTR3Q96KR7 559 aa11.98□□□□□ -0.49
CLTCL1-209ENST00000617103 SEC62Q99442 399 aaKnown RBP11.98□□□□□ -0.49
CLTCL1-209ENST00000617103 NAP1L3Q99457 506 aaPredicted RBP11.98□□□□□ -0.49
CLTCL1-209ENST00000617103 C6orf50Q9HD87 102 aa11.98□□□□□ -0.49
CLTCL1-209ENST00000617103 BUB1BO60566 1050 aaPredicted RBP11.98□□□□□ -0.49
CLTCL1-209ENST00000617103 CUTAO60888 179 aa11.98□□□□□ -0.49
CLTCL1-209ENST00000617103 STMN2Q93045 179 aa11.98□□□□□ -0.49
CLTCL1-209ENST00000617103 HELLSQ9NRZ9 838 aa11.98□□□□□ -0.49
CLTCL1-209ENST00000617103 TSPY3P0CV98 308 aa11.98□□□□□ -0.49
CLTCL1-209ENST00000617103 TSPY8P0CW00 308 aa11.98□□□□□ -0.49
CLTCL1-209ENST00000617103 MCM7P33993 719 aa11.98□□□□□ -0.49
CLTCL1-209ENST00000617103 NAA16Q6N069 864 aaPredicted RBP11.98□□□□□ -0.49
CLTCL1-209ENST00000617103 NOC4LQ9BVI4 516 aaKnown RBP11.98□□□□□ -0.49
CLTCL1-209ENST00000617103 AMOTL2Q9Y2J4 779 aa11.98□□□□□ -0.49
CLTCL1-209ENST00000617103 ATP6V0A2Q9Y487 856 aa11.98□□□□□ -0.49
CLTCL1-209ENST00000617103 KRT9P35527 623 aa11.97□□□□□ -0.49
CLTCL1-209ENST00000617103 PPP1R7Q15435 360 aa11.97□□□□□ -0.49
CLTCL1-209ENST00000617103 UTP14CQ5TAP6 766 aaKnown RBP11.97□□□□□ -0.49
CLTCL1-209ENST00000617103 FMNL3Q8IVF7 1028 aa11.97□□□□□ -0.49
CLTCL1-209ENST00000617103 RPGRIP1Q96KN7 1286 aa11.97□□□□□ -0.49
CLTCL1-209ENST00000617103 ETF1P62495 437 aaKnown RBP11.97□□□□□ -0.49
CLTCL1-209ENST00000617103 CROCCP2Q86T23 111 aa11.97□□□□□ -0.49
CLTCL1-209ENST00000617103 SECISBP2LQ93073 1101 aaKnown RBP11.97□□□□□ -0.49
CLTCL1-209ENST00000617103 XPO4Q9C0E2 1151 aaKnown RBP11.97□□□□□ -0.49
CLTCL1-209ENST00000617103 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.97□□□□□ -0.49
CLTCL1-209ENST00000617103 MRVI1Q9Y6F6 885 aa11.97□□□□□ -0.49
CLTCL1-209ENST00000617103 HMGXB3Q12766 1538 aa11.97□□□□□ -0.49
CLTCL1-209ENST00000617103 CUL7Q14999 1698 aa11.97□□□□□ -0.49
CLTCL1-209ENST00000617103 ACTN4O43707 911 aaKnown RBP11.97□□□□□ -0.49
CLTCL1-209ENST00000617103 ZPR1O75312 459 aa11.97□□□□□ -0.49
CLTCL1-209ENST00000617103 PLCB3Q01970 1234 aa11.97□□□□□ -0.49
CLTCL1-209ENST00000617103 PAK2Q13177 524 aa11.97□□□□□ -0.49
CLTCL1-209ENST00000617103 CDC37L1Q7L3B6 337 aa11.97□□□□□ -0.49
CLTCL1-209ENST00000617103 CACNA2D3Q8IZS8 1091 aa11.97□□□□□ -0.49
CLTCL1-209ENST00000617103 RGS22Q8NE09 1264 aa11.97□□□□□ -0.49
CLTCL1-209ENST00000617103 RABEP2Q9H5N1 569 aa11.97□□□□□ -0.49
CLTCL1-209ENST00000617103 CABP5Q9NP86 173 aa11.97□□□□□ -0.49
CLTCL1-209ENST00000617103 CTNND2Q9UQB3 1225 aa11.97□□□□□ -0.49
CLTCL1-209ENST00000617103 SAMM50Q9Y512 469 aa11.97□□□□□ -0.49
CLTCL1-209ENST00000617103 NPC1L1Q9UHC9 1359 aa11.97□□□□□ -0.49
CLTCL1-209ENST00000617103 VWA3AA6NCI4 1184 aa11.97□□□□□ -0.49
CLTCL1-209ENST00000617103 FOXO3O43524 673 aa11.97□□□□□ -0.49
CLTCL1-209ENST00000617103 MTHFSDQ2M296 383 aaKnown RBP11.97□□□□□ -0.49
CLTCL1-209ENST00000617103 SND1Q7KZF4 910 aaKnown RBP eCLIP11.97□□□□□ -0.49
CLTCL1-209ENST00000617103 PNMA8AQ86V59 439 aaPredicted RBP11.97□□□□□ -0.49
CLTCL1-209ENST00000617103 NUP58Q9BVL2 599 aa11.97□□□□□ -0.49
CLTCL1-209ENST00000617103 SYNRGQ9UMZ2 1314 aa11.96□□□□□ -0.49
CLTCL1-209ENST00000617103 EFCAB8A8MWE9 144 aa11.96□□□□□ -0.49
CLTCL1-209ENST00000617103 MTX1Q13505 466 aa11.96□□□□□ -0.49
CLTCL1-209ENST00000617103 TRMT1LQ7Z2T5 733 aaKnown RBP11.96□□□□□ -0.49
CLTCL1-209ENST00000617103 TMEM110-MUSTN1A8MSY1 372 aa11.96□□□□□ -0.49
CLTCL1-209ENST00000617103 RXRAP19793 462 aa11.96□□□□□ -0.49
CLTCL1-209ENST00000617103 SF3B2Q13435 895 aaKnown RBP11.96□□□□□ -0.49
CLTCL1-209ENST00000617103 VWA3BQ502W6 1294 aa11.96□□□□□ -0.49
CLTCL1-209ENST00000617103 HS2ST1Q7LGA3 356 aa11.96□□□□□ -0.49
CLTCL1-209ENST00000617103 WDR66Q8TBY9 1149 aa11.96□□□□□ -0.49
CLTCL1-209ENST00000617103 TM6SF1Q9BZW5 370 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms