RNA–Protein interactions for RNA: ENST00000613642.4

CCL16-206, Transcript of C-C motif chemokine ligand 16, humanhuman

TSL 3

Gene CCL16, Length 687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL16-206ENST00000613642 GPR25O00155 361 aa6.46□□□□□ -1.38
CCL16-206ENST00000613642 MTA2O94776 668 aa6.46□□□□□ -1.38
CCL16-206ENST00000613642 SH3BGRP55822 239 aaPredicted RBP6.46□□□□□ -1.38
CCL16-206ENST00000613642 DEUP1Q05D60 604 aa6.46□□□□□ -1.38
CCL16-206ENST00000613642 WASHC5Q12768 1159 aa6.46□□□□□ -1.38
CCL16-206ENST00000613642 TRIM29Q14134 588 aa6.46□□□□□ -1.38
CCL16-206ENST00000613642 HHATQ5VTY9 493 aa6.46□□□□□ -1.38
CCL16-206ENST00000613642 EFCAB2Q5VUJ9 269 aa6.46□□□□□ -1.38
CCL16-206ENST00000613642 CC2D1AQ6P1N0 951 aaPredicted RBP6.46□□□□□ -1.38
CCL16-206ENST00000613642 TXLNBQ8N3L3 684 aa6.46□□□□□ -1.38
CCL16-206ENST00000613642 TAF4BQ92750 862 aa6.46□□□□□ -1.38
CCL16-206ENST00000613642 GOLGA1Q92805 767 aa6.46□□□□□ -1.38
CCL16-206ENST00000613642 BICD1Q96G01 975 aa6.46□□□□□ -1.38
CCL16-206ENST00000613642 GPATCH3Q96I76 525 aa6.46□□□□□ -1.38
CCL16-206ENST00000613642 RSRC1Q96IZ7 334 aaKnown RBP6.46□□□□□ -1.38
CCL16-206ENST00000613642 SCAPERQ9BY12 1400 aa6.46□□□□□ -1.38
CCL16-206ENST00000613642 GRIP2Q9C0E4 1043 aa6.46□□□□□ -1.38
CCL16-206ENST00000613642 LRRC27Q9C0I9 530 aa6.46□□□□□ -1.38
CCL16-206ENST00000613642 TOMM22Q9NS69 142 aa6.46□□□□□ -1.38
CCL16-206ENST00000613642 KIAA1522Q9P206 1035 aaPredicted RBP6.46□□□□□ -1.38
CCL16-206ENST00000613642 GABBR1Q9UBS5 961 aa6.46□□□□□ -1.38
CCL16-206ENST00000613642 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.46□□□□□ -1.38
CCL16-206ENST00000613642 ITM2BQ9Y287 266 aa6.46□□□□□ -1.38
CCL16-206ENST00000613642 SPAG9O60271 1321 aaKnown RBP6.46□□□□□ -1.38
CCL16-206ENST00000613642 SBNO2Q9Y2G9 1366 aa6.45□□□□□ -1.38
CCL16-206ENST00000613642 TMEM110-MUSTN1A8MSY1 372 aa6.45□□□□□ -1.38
CCL16-206ENST00000613642 H7C1W4 665 aa6.45□□□□□ -1.38
CCL16-206ENST00000613642 MEN1O00255 615 aa6.45□□□□□ -1.38
CCL16-206ENST00000613642 HIP1RO75146 1068 aa6.45□□□□□ -1.38
CCL16-206ENST00000613642 VAMP4O75379 141 aa6.45□□□□□ -1.38
CCL16-206ENST00000613642 TGFB3P10600 412 aa6.45□□□□□ -1.38
CCL16-206ENST00000613642 HOXD10P28358 340 aa6.45□□□□□ -1.38
CCL16-206ENST00000613642 CLK1P49759 484 aaKnown RBP6.45□□□□□ -1.38
CCL16-206ENST00000613642 PSME1Q06323 249 aa6.45□□□□□ -1.38
CCL16-206ENST00000613642 POU4F2Q12837 409 aa6.45□□□□□ -1.38
CCL16-206ENST00000613642 NOLC1Q14978 699 aaKnown RBP eCLIP6.45□□□□□ -1.38
CCL16-206ENST00000613642 SEPT7Q16181 437 aaKnown RBP6.45□□□□□ -1.38
CCL16-206ENST00000613642 INF2Q27J81 1249 aa6.45□□□□□ -1.38
CCL16-206ENST00000613642 PARP10Q53GL7 1025 aa6.45□□□□□ -1.38
CCL16-206ENST00000613642 WDR44Q5JSH3 913 aa6.45□□□□□ -1.38
CCL16-206ENST00000613642 B4GALNT3Q6L9W6 998 aa6.45□□□□□ -1.38
CCL16-206ENST00000613642 FOXR1Q6PIV2 292 aa6.45□□□□□ -1.38
CCL16-206ENST00000613642 KRT77Q7Z794 578 aa6.45□□□□□ -1.38
CCL16-206ENST00000613642 TRIM42Q8IWZ5 723 aa6.45□□□□□ -1.38
CCL16-206ENST00000613642 FAM76AQ8TAV0 307 aa6.45□□□□□ -1.38
CCL16-206ENST00000613642 CLUAP1Q96AJ1 413 aa6.45□□□□□ -1.38
CCL16-206ENST00000613642 MRRFQ96E11 262 aaKnown RBP6.45□□□□□ -1.38
CCL16-206ENST00000613642 PCMTD1Q96MG8 357 aaPredicted RBP6.45□□□□□ -1.38
CCL16-206ENST00000613642 NEUROD6Q96NK8 337 aa6.45□□□□□ -1.38
CCL16-206ENST00000613642 RPS6KC1Q96S38 1066 aa6.45□□□□□ -1.38
CCL16-206ENST00000613642 BAG1Q99933 345 aaPredicted RBP6.45□□□□□ -1.38
CCL16-206ENST00000613642 INCENPQ9NQS7 918 aa6.45□□□□□ -1.38
CCL16-206ENST00000613642 COMMD8Q9NX08 183 aa6.45□□□□□ -1.38
CCL16-206ENST00000613642 RABL2AQ9UBK7 228 aaPredicted RBP6.45□□□□□ -1.38
CCL16-206ENST00000613642 TMCC3Q9ULS5 477 aa6.45□□□□□ -1.38
CCL16-206ENST00000613642 ATP6V0A2Q9Y487 856 aa6.45□□□□□ -1.38
CCL16-206ENST00000613642 SPATA31C2B4DYI2 1134 aa6.44□□□□□ -1.38
CCL16-206ENST00000613642 MTRF1O75570 445 aaKnown RBP6.44□□□□□ -1.38
CCL16-206ENST00000613642 KIAA0754O94854 1291 aa6.44□□□□□ -1.38
CCL16-206ENST00000613642 SNUPNO95149 360 aaKnown RBP6.44□□□□□ -1.38
CCL16-206ENST00000613642 SMC2O95347 1197 aa6.44□□□□□ -1.38
CCL16-206ENST00000613642 CD53P19397 219 aa6.44□□□□□ -1.38
CCL16-206ENST00000613642 CYP2C19P33261 490 aa6.44□□□□□ -1.38
CCL16-206ENST00000613642 NASPP49321 788 aaPredicted RBP6.44□□□□□ -1.38
CCL16-206ENST00000613642 ZNF131P52739 623 aa6.44□□□□□ -1.38
CCL16-206ENST00000613642 CLN3Q13286 438 aa6.44□□□□□ -1.38
CCL16-206ENST00000613642 PTPROQ16827 1216 aa6.44□□□□□ -1.38
CCL16-206ENST00000613642 RIPOR1Q6ZS17 1223 aa6.44□□□□□ -1.38
CCL16-206ENST00000613642 CCDC186Q7Z3E2 898 aa6.44□□□□□ -1.38
CCL16-206ENST00000613642 SDCCAG8Q86SQ7 713 aaPredicted RBP6.44□□□□□ -1.38
CCL16-206ENST00000613642 LRRC49Q8IUZ0 686 aa6.44□□□□□ -1.38
CCL16-206ENST00000613642 CHCHD4Q8N4Q1 142 aa6.44□□□□□ -1.38
CCL16-206ENST00000613642 RNF214Q8ND24 703 aa6.44□□□□□ -1.38
CCL16-206ENST00000613642 GTPBP3Q969Y2 492 aaKnown RBP6.44□□□□□ -1.38
CCL16-206ENST00000613642 ACDQ96AP0 544 aa6.44□□□□□ -1.38
CCL16-206ENST00000613642 TRIM6Q9C030 488 aaPredicted RBP6.44□□□□□ -1.38
CCL16-206ENST00000613642 RBSNQ9H1K0 784 aa6.44□□□□□ -1.38
CCL16-206ENST00000613642 TSPY26PQ9H489 355 aa6.44□□□□□ -1.38
CCL16-206ENST00000613642 DIAPH3Q9NSV4 1193 aa6.44□□□□□ -1.38
CCL16-206ENST00000613642 LRRC4BQ9NT99 713 aa6.44□□□□□ -1.38
CCL16-206ENST00000613642 TMEM63CQ9P1W3 806 aa6.44□□□□□ -1.38
CCL16-206ENST00000613642 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.44□□□□□ -1.38
CCL16-206ENST00000613642 MAFFQ9ULX9 164 aa6.44□□□□□ -1.38
CCL16-206ENST00000613642 FAM25EA8MYX2 175 aa6.43□□□□□ -1.38
CCL16-206ENST00000613642 MYO1CO00159 1063 aa6.43□□□□□ -1.38
CCL16-206ENST00000613642 SLC27A2O14975 620 aa6.43□□□□□ -1.38
CCL16-206ENST00000613642 SGSM2O43147 1006 aa6.43□□□□□ -1.38
CCL16-206ENST00000613642 SASH1O94885 1247 aa6.43□□□□□ -1.38
CCL16-206ENST00000613642 MMEP08473 750 aa6.43□□□□□ -1.38
CCL16-206ENST00000613642 BCRP11274 1271 aa6.43□□□□□ -1.38
CCL16-206ENST00000613642 ZNF24P17028 368 aa6.43□□□□□ -1.38
CCL16-206ENST00000613642 IBSPP21815 317 aaPredicted RBP6.43□□□□□ -1.38
CCL16-206ENST00000613642 YY1P25490 414 aa6.43□□□□□ -1.38
CCL16-206ENST00000613642 HOXA10P31260 410 aaPredicted RBP6.43□□□□□ -1.38
CCL16-206ENST00000613642 MAGEA9P43362 315 aa6.43□□□□□ -1.38
CCL16-206ENST00000613642 SCTRP47872 440 aa6.43□□□□□ -1.38
CCL16-206ENST00000613642 RBM6P78332 1123 aaKnown RBP6.43□□□□□ -1.38
CCL16-206ENST00000613642 PTK7Q13308 1070 aa6.43□□□□□ -1.38
CCL16-206ENST00000613642 KCTD2Q14681 263 aa6.43□□□□□ -1.38
CCL16-206ENST00000613642 TBC1D25Q3MII6 688 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms