RNA–Protein interactions for RNA: ENST00000612828.4

CNTNAP3B-211, Transcript of contactin associated protein like 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNTNAP3B, Length 7,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-211ENST00000612828 SMCR8Q8TEV9 937 aaPredicted RBP12.14□□□□□ -0.47
CNTNAP3B-211ENST00000612828 ARHGEF2Q92974 986 aaKnown RBP12.14□□□□□ -0.47
CNTNAP3B-211ENST00000612828 NBPF3Q9H094 633 aa12.14□□□□□ -0.47
CNTNAP3B-211ENST00000612828 USH1CQ9Y6N9 552 aa12.14□□□□□ -0.47
CNTNAP3B-211ENST00000612828 GOLGA1Q92805 767 aa12.13□□□□□ -0.47
CNTNAP3B-211ENST00000612828 COG7P83436 770 aa12.13□□□□□ -0.47
CNTNAP3B-211ENST00000612828 CACNA2D3Q8IZS8 1091 aa12.13□□□□□ -0.47
CNTNAP3B-211ENST00000612828 CDV3Q9UKY7 258 aaKnown RBP12.13□□□□□ -0.47
CNTNAP3B-211ENST00000612828 ZPR1O75312 459 aa12.13□□□□□ -0.47
CNTNAP3B-211ENST00000612828 SLC8A3P57103 927 aa12.13□□□□□ -0.47
CNTNAP3B-211ENST00000612828 ZC3H12BQ5HYM0 836 aaKnown RBP12.13□□□□□ -0.47
CNTNAP3B-211ENST00000612828 TSHZ3Q63HK5 1081 aa12.13□□□□□ -0.47
CNTNAP3B-211ENST00000612828 RPGRQ92834 1020 aaKnown RBP12.13□□□□□ -0.47
CNTNAP3B-211ENST00000612828 ALKBH8Q96BT7 664 aaKnown RBP12.13□□□□□ -0.47
CNTNAP3B-211ENST00000612828 SPAG5Q96R06 1193 aa12.13□□□□□ -0.47
CNTNAP3B-211ENST00000612828 PRDM2Q13029 1718 aa12.13□□□□□ -0.47
CNTNAP3B-211ENST00000612828 RAPGEF3O95398 923 aa12.13□□□□□ -0.47
CNTNAP3B-211ENST00000612828 KIF5BP33176 963 aa12.13□□□□□ -0.47
CNTNAP3B-211ENST00000612828 CDC26Q8NHZ8 85 aa12.13□□□□□ -0.47
CNTNAP3B-211ENST00000612828 OPTNQ96CV9 577 aa12.13□□□□□ -0.47
CNTNAP3B-211ENST00000612828 NKTRP30414 1462 aaKnown RBP12.13□□□□□ -0.47
CNTNAP3B-211ENST00000612828 GIGYF1O75420 1035 aaPredicted RBP12.13□□□□□ -0.47
CNTNAP3B-211ENST00000612828 GPHNQ9NQX3 736 aaPredicted RBP12.13□□□□□ -0.47
CNTNAP3B-211ENST00000612828 LONP1P36776 959 aaKnown RBP12.13□□□□□ -0.47
CNTNAP3B-211ENST00000612828 PLB1Q6P1J6 1458 aa12.13□□□□□ -0.47
CNTNAP3B-211ENST00000612828 ARHGEF11O15085 1522 aa12.12□□□□□ -0.47
CNTNAP3B-211ENST00000612828 ITIH3Q06033 890 aa12.12□□□□□ -0.47
CNTNAP3B-211ENST00000612828 CKAP4Q07065 602 aaKnown RBP12.12□□□□□ -0.47
CNTNAP3B-211ENST00000612828 INF2Q27J81 1249 aa12.12□□□□□ -0.47
CNTNAP3B-211ENST00000612828 HDGFL1Q5TGJ6 251 aa12.12□□□□□ -0.47
CNTNAP3B-211ENST00000612828 MTRQ99707 1265 aa12.12□□□□□ -0.47
CNTNAP3B-211ENST00000612828 ZNF692Q9BU19 519 aaPredicted RBP12.12□□□□□ -0.47
CNTNAP3B-211ENST00000612828 CCDC68Q9H2F9 335 aa12.12□□□□□ -0.47
CNTNAP3B-211ENST00000612828 RBM27Q9P2N5 1060 aaKnown RBP12.12□□□□□ -0.47
CNTNAP3B-211ENST00000612828 LUC7L2Q9Y383 392 aaKnown RBP12.12□□□□□ -0.47
CNTNAP3B-211ENST00000612828 IDH1O75874 414 aaKnown RBP12.12□□□□□ -0.47
CNTNAP3B-211ENST00000612828 PAMP19021 973 aa12.12□□□□□ -0.47
CNTNAP3B-211ENST00000612828 NRG3P56975 720 aa12.12□□□□□ -0.47
CNTNAP3B-211ENST00000612828 RAB11FIP4Q86YS3 637 aa12.12□□□□□ -0.47
CNTNAP3B-211ENST00000612828 CUL3Q13618 768 aa12.12□□□□□ -0.47
CNTNAP3B-211ENST00000612828 EVI5LQ96CN4 794 aa12.12□□□□□ -0.47
CNTNAP3B-211ENST00000612828 ARFGAP3Q9NP61 516 aa12.12□□□□□ -0.47
CNTNAP3B-211ENST00000612828 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.12□□□□□ -0.47
CNTNAP3B-211ENST00000612828 SAT1P21673 171 aa12.12□□□□□ -0.47
CNTNAP3B-211ENST00000612828 ZNF131P52739 623 aa12.12□□□□□ -0.47
CNTNAP3B-211ENST00000612828 PSMD2Q13200 908 aa12.12□□□□□ -0.47
CNTNAP3B-211ENST00000612828 ANKS4BQ8N8V4 417 aa12.12□□□□□ -0.47
CNTNAP3B-211ENST00000612828 VMP1Q96GC9 406 aa12.12□□□□□ -0.47
CNTNAP3B-211ENST00000612828 CCDC30Q5VVM6 783 aa12.12□□□□□ -0.47
CNTNAP3B-211ENST00000612828 BSPRYQ5W0U4 402 aa12.12□□□□□ -0.47
CNTNAP3B-211ENST00000612828 NBPF10Q6P3W6 841 aaKnown RBP12.12□□□□□ -0.47
CNTNAP3B-211ENST00000612828 CWC27Q6UX04 472 aaKnown RBP12.12□□□□□ -0.47
CNTNAP3B-211ENST00000612828 ZNF444Q8N0Y2 327 aaPredicted RBP12.12□□□□□ -0.47
CNTNAP3B-211ENST00000612828 PNMA2Q9UL42 364 aa12.12□□□□□ -0.47
CNTNAP3B-211ENST00000612828 GPRASP1Q5JY77 1395 aa12.12□□□□□ -0.47
CNTNAP3B-211ENST00000612828 PLEKHH1Q9ULM0 1364 aa12.12□□□□□ -0.47
CNTNAP3B-211ENST00000612828 CTAGE5O15320 804 aa12.12□□□□□ -0.47
CNTNAP3B-211ENST00000612828 NAALADL2Q58DX5 795 aa12.12□□□□□ -0.47
CNTNAP3B-211ENST00000612828 HNRNPCP07910 306 aaKnown RBP eCLIP12.11□□□□□ -0.47
CNTNAP3B-211ENST00000612828 FLOT2Q14254 428 aa12.11□□□□□ -0.47
CNTNAP3B-211ENST00000612828 RELL1Q8IUW5 271 aa12.11□□□□□ -0.47
CNTNAP3B-211ENST00000612828 FLCNQ8NFG4 579 aa12.11□□□□□ -0.47
CNTNAP3B-211ENST00000612828 NFE2L2Q16236 605 aa12.11□□□□□ -0.47
CNTNAP3B-211ENST00000612828 CEP131Q9UPN4 1083 aa12.11□□□□□ -0.47
CNTNAP3B-211ENST00000612828 TRIM32Q13049 653 aa12.11□□□□□ -0.47
CNTNAP3B-211ENST00000612828 ANGPTL8Q6UXH0 198 aa12.11□□□□□ -0.47
CNTNAP3B-211ENST00000612828 PNMA8AQ86V59 439 aaPredicted RBP12.11□□□□□ -0.47
CNTNAP3B-211ENST00000612828 LEMD2Q8NC56 503 aa12.11□□□□□ -0.47
CNTNAP3B-211ENST00000612828 L3MBTL3Q96JM7 780 aaPredicted RBP12.11□□□□□ -0.47
CNTNAP3B-211ENST00000612828 UIMC1Q96RL1 719 aa12.11□□□□□ -0.47
CNTNAP3B-211ENST00000612828 STMN4Q9H169 189 aaPredicted RBP12.11□□□□□ -0.47
CNTNAP3B-211ENST00000612828 TRMT1Q9NXH9 659 aaKnown RBP12.11□□□□□ -0.47
CNTNAP3B-211ENST00000612828 BAG5Q9UL15 447 aa12.11□□□□□ -0.47
CNTNAP3B-211ENST00000612828 ESRRBO95718 433 aa12.11□□□□□ -0.47
CNTNAP3B-211ENST00000612828 CCDC186Q7Z3E2 898 aa12.11□□□□□ -0.47
CNTNAP3B-211ENST00000612828 RNF169Q8NCN4 708 aa12.11□□□□□ -0.47
CNTNAP3B-211ENST00000612828 GOLIM4O00461 696 aa12.11□□□□□ -0.47
CNTNAP3B-211ENST00000612828 GUCY1B3Q02153 619 aa12.11□□□□□ -0.47
CNTNAP3B-211ENST00000612828 TBC1D9Q6ZT07 1266 aa12.11□□□□□ -0.47
CNTNAP3B-211ENST00000612828 NAA15Q9BXJ9 866 aaKnown RBP12.11□□□□□ -0.47
CNTNAP3B-211ENST00000612828 SYNJ2O15056 1496 aa12.1□□□□□ -0.47
CNTNAP3B-211ENST00000612828 CTAGE9A4FU28 777 aa12.1□□□□□ -0.47
CNTNAP3B-211ENST00000612828 BAG4O95429 457 aaKnown RBP12.1□□□□□ -0.47
CNTNAP3B-211ENST00000612828 SLFN14P0C7P3 912 aa12.1□□□□□ -0.47
CNTNAP3B-211ENST00000612828 SETSIPP0DME0 302 aa12.1□□□□□ -0.47
CNTNAP3B-211ENST00000612828 ERCC6LQ2NKX8 1250 aa12.1□□□□□ -0.47
CNTNAP3B-211ENST00000612828 F8W031 263 aaPredicted RBP12.1□□□□□ -0.47
CNTNAP3B-211ENST00000612828 ZNF263O14978 683 aa12.1□□□□□ -0.47
CNTNAP3B-211ENST00000612828 RANBP6O60518 1105 aaKnown RBP12.1□□□□□ -0.47
CNTNAP3B-211ENST00000612828 LUC7L3O95232 432 aaKnown RBP12.1□□□□□ -0.47
CNTNAP3B-211ENST00000612828 KRT5P13647 590 aa12.1□□□□□ -0.47
CNTNAP3B-211ENST00000612828 PCK1P35558 622 aa12.1□□□□□ -0.47
CNTNAP3B-211ENST00000612828 FAM186BQ8IYM0 893 aa12.1□□□□□ -0.47
CNTNAP3B-211ENST00000612828 NSMCE1Q8WV22 266 aa12.1□□□□□ -0.47
CNTNAP3B-211ENST00000612828 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.1□□□□□ -0.47
CNTNAP3B-211ENST00000612828 TMEM266Q2M3C6 531 aa12.1□□□□□ -0.47
CNTNAP3B-211ENST00000612828 MRFAP1L1Q96HT8 127 aa12.1□□□□□ -0.47
CNTNAP3B-211ENST00000612828 ZSCAN16Q9H4T2 348 aaPredicted RBP12.1□□□□□ -0.47
CNTNAP3B-211ENST00000612828 ZNF304Q9HCX3 659 aa12.1□□□□□ -0.47
CNTNAP3B-211ENST00000612828 FAM83GA6ND36 823 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms