RNA–Protein interactions for RNA: ENST00000612688.1

PPP4R3B-204, Transcript of protein phosphatase 4 regulatory subunit 3B, human

TSL 2

Gene PPP4R3B, Length 2,981 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R3B-204	ENST00000612688	TTC41P	Q6P2S7	1318 aa		13.76	□□□□□ -0.21
PPP4R3B-204	ENST00000612688	CCDC171	Q6TFL3	1326 aa		13.76	□□□□□ -0.21
PPP4R3B-204	ENST00000612688		A0A0G2JLW4	131 aa		13.76	□□□□□ -0.21
PPP4R3B-204	ENST00000612688	GOLIM4	O00461	696 aa		13.76	□□□□□ -0.21
PPP4R3B-204	ENST00000612688	CTIF	O43310	598 aa	Known RBP	13.76	□□□□□ -0.21
PPP4R3B-204	ENST00000612688	TYRO3	Q06418	890 aa		13.76	□□□□□ -0.21
PPP4R3B-204	ENST00000612688	PARP10	Q53GL7	1025 aa		13.76	□□□□□ -0.21
PPP4R3B-204	ENST00000612688	KIF18A	Q8NI77	898 aa		13.76	□□□□□ -0.21
PPP4R3B-204	ENST00000612688	TFCP2L1	Q9NZI6	479 aa		13.76	□□□□□ -0.21
PPP4R3B-204	ENST00000612688	RGS17	Q9UGC6	210 aa	Predicted RBP	13.76	□□□□□ -0.21
PPP4R3B-204	ENST00000612688	ZNF215	Q9UL58	517 aa	Predicted RBP	13.76	□□□□□ -0.21
PPP4R3B-204	ENST00000612688	THSD7A	Q9UPZ6	1657 aa		13.76	□□□□□ -0.21
PPP4R3B-204	ENST00000612688	WTIP	A6NIX2	430 aa	Predicted RBP	13.75	□□□□□ -0.21
PPP4R3B-204	ENST00000612688	KMT5B	Q4FZB7	885 aa		13.75	□□□□□ -0.21
PPP4R3B-204	ENST00000612688	KRT222	Q8N1A0	295 aa		13.75	□□□□□ -0.21
PPP4R3B-204	ENST00000612688	SPATA32	Q96LK8	384 aa		13.75	□□□□□ -0.21
PPP4R3B-204	ENST00000612688	FUCA2	Q9BTY2	467 aa		13.75	□□□□□ -0.21
PPP4R3B-204	ENST00000612688	DDX41	Q9UJV9	622 aa	Known RBP	13.75	□□□□□ -0.21
PPP4R3B-204	ENST00000612688	CCDC192	P0DO97	292 aa		13.75	□□□□□ -0.21
PPP4R3B-204	ENST00000612688	MRVI1	Q9Y6F6	885 aa		13.75	□□□□□ -0.21
PPP4R3B-204	ENST00000612688	USP27X	A6NNY8	438 aa		13.74	□□□□□ -0.21
PPP4R3B-204	ENST00000612688	CAPN2	P17655	700 aa		13.74	□□□□□ -0.21
PPP4R3B-204	ENST00000612688	CCT2	P78371	535 aa	Known RBP	13.74	□□□□□ -0.21
PPP4R3B-204	ENST00000612688	BLOC1S2	Q6QNY1	142 aa		13.74	□□□□□ -0.21
PPP4R3B-204	ENST00000612688	RUFY2	Q8WXA3	655 aa		13.74	□□□□□ -0.21
PPP4R3B-204	ENST00000612688	ZSWIM6	Q9HCJ5	1215 aa		13.74	□□□□□ -0.21
PPP4R3B-204	ENST00000612688	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	13.74	□□□□□ -0.21
PPP4R3B-204	ENST00000612688	ATP6V1D	Q9Y5K8	247 aa		13.74	□□□□□ -0.21
PPP4R3B-204	ENST00000612688	CDHR2	Q9BYE9	1310 aa		13.74	□□□□□ -0.21
PPP4R3B-204	ENST00000612688	KRT85	P78386	507 aa		13.74	□□□□□ -0.21
PPP4R3B-204	ENST00000612688	NECTIN1	Q15223	517 aa		13.74	□□□□□ -0.21
PPP4R3B-204	ENST00000612688	MAP3K11	Q16584	847 aa		13.74	□□□□□ -0.21
PPP4R3B-204	ENST00000612688	SLC51A	Q86UW1	340 aa		13.74	□□□□□ -0.21
PPP4R3B-204	ENST00000612688	XAGE2	Q96GT9	111 aa		13.74	□□□□□ -0.21
PPP4R3B-204	ENST00000612688	CBX8	Q9HC52	389 aa		13.74	□□□□□ -0.21
PPP4R3B-204	ENST00000612688	RC3H1	Q5TC82	1133 aa	Known RBP	13.74	□□□□□ -0.21
PPP4R3B-204	ENST00000612688	VPS53	Q5VIR6	699 aa		13.74	□□□□□ -0.21
PPP4R3B-204	ENST00000612688	PLA2G12B	Q9BX93	195 aa		13.74	□□□□□ -0.21
PPP4R3B-204	ENST00000612688	IFIT1	P09914	478 aa	Known RBP	13.73	□□□□□ -0.21
PPP4R3B-204	ENST00000612688	CCDC152	Q4G0S7	254 aa		13.73	□□□□□ -0.21
PPP4R3B-204	ENST00000612688	CLEC4G	Q6UXB4	293 aa		13.73	□□□□□ -0.21
PPP4R3B-204	ENST00000612688	FILIP1	Q7Z7B0	1213 aa		13.73	□□□□□ -0.21
PPP4R3B-204	ENST00000612688	TTC39A	Q5SRH9	613 aa		13.73	□□□□□ -0.21
PPP4R3B-204	ENST00000612688	MSL1	Q68DK7	614 aa		13.73	□□□□□ -0.21
PPP4R3B-204	ENST00000612688	RIPOR2	Q9Y4F9	1068 aa		13.73	□□□□□ -0.21
PPP4R3B-204	ENST00000612688	GABPB1	Q06547	395 aa	Predicted RBP	13.72	□□□□□ -0.21
PPP4R3B-204	ENST00000612688	NFIX	Q14938	502 aa		13.72	□□□□□ -0.21
PPP4R3B-204	ENST00000612688	FBXO38	Q6PIJ6	1188 aa		13.72	□□□□□ -0.21
PPP4R3B-204	ENST00000612688	TMEM87A	Q8NBN3	555 aa		13.72	□□□□□ -0.21
PPP4R3B-204	ENST00000612688	NEK11	Q8NG66	645 aa		13.72	□□□□□ -0.21
PPP4R3B-204	ENST00000612688	EVI5L	Q96CN4	794 aa		13.72	□□□□□ -0.21
PPP4R3B-204	ENST00000612688	NCOA5	Q9HCD5	579 aa	Known RBP	13.72	□□□□□ -0.21
PPP4R3B-204	ENST00000612688	BRWD3	Q6RI45	1802 aa		13.72	□□□□□ -0.21
PPP4R3B-204	ENST00000612688	IGHMBP2	P38935	993 aa	Known RBP	13.72	□□□□□ -0.21
PPP4R3B-204	ENST00000612688	SCARF1	Q14162	830 aa		13.72	□□□□□ -0.21
PPP4R3B-204	ENST00000612688	CEP135	Q66GS9	1140 aa		13.72	□□□□□ -0.21
PPP4R3B-204	ENST00000612688	AOX1	Q06278	1338 aa		13.72	□□□□□ -0.21
PPP4R3B-204	ENST00000612688	ABCC12	Q96J65	1359 aa		13.71	□□□□□ -0.21
PPP4R3B-204	ENST00000612688		H3BQV1	296 aa		13.71	□□□□□ -0.21
PPP4R3B-204	ENST00000612688	TOB2	Q14106	344 aa	Predicted RBP	13.71	□□□□□ -0.21
PPP4R3B-204	ENST00000612688	IFFO2	Q5TF58	517 aa		13.71	□□□□□ -0.21
PPP4R3B-204	ENST00000612688	TPTE2	Q6XPS3	522 aa		13.71	□□□□□ -0.21
PPP4R3B-204	ENST00000612688	BRF1	Q92994	677 aa		13.71	□□□□□ -0.21
PPP4R3B-204	ENST00000612688	PGBD1	Q96JS3	809 aa		13.71	□□□□□ -0.21
PPP4R3B-204	ENST00000612688	SMTNL1	A8MU46	457 aa		13.71	□□□□□ -0.21
PPP4R3B-204	ENST00000612688	PTPN21	Q16825	1174 aa		13.71	□□□□□ -0.21
PPP4R3B-204	ENST00000612688	CCDC144B	Q3MJ40	725 aa		13.71	□□□□□ -0.21
PPP4R3B-204	ENST00000612688	CCDC144CP	Q8IYA2	1237 aa		13.71	□□□□□ -0.21
PPP4R3B-204	ENST00000612688	CELF1	Q92879	486 aa	Known RBP	13.71	□□□□□ -0.21
PPP4R3B-204	ENST00000612688	EN1	Q05925	392 aa	Predicted RBP	13.71	□□□□□ -0.22
PPP4R3B-204	ENST00000612688	CCDC158	Q5M9N0	1113 aa		13.71	□□□□□ -0.22
PPP4R3B-204	ENST00000612688	OTUD7B	Q6GQQ9	843 aa		13.71	□□□□□ -0.22
PPP4R3B-204	ENST00000612688	NLRP3	Q96P20	1036 aa		13.71	□□□□□ -0.22
PPP4R3B-204	ENST00000612688	USP42	Q9H9J4	1324 aa	Known RBP	13.7	□□□□□ -0.22
PPP4R3B-204	ENST00000612688	CIAO1	O76071	339 aa		13.7	□□□□□ -0.22
PPP4R3B-204	ENST00000612688	ATP5J	P18859	108 aa		13.7	□□□□□ -0.22
PPP4R3B-204	ENST00000612688	HNRNPH2	P55795	449 aa	Known RBP	13.7	□□□□□ -0.22
PPP4R3B-204	ENST00000612688	ZNF827	Q17R98	1081 aa		13.7	□□□□□ -0.22
PPP4R3B-204	ENST00000612688	ISM2	Q6H9L7	571 aa		13.7	□□□□□ -0.22
PPP4R3B-204	ENST00000612688	CACTIN	Q8WUQ7	758 aa	Known RBP	13.7	□□□□□ -0.22
PPP4R3B-204	ENST00000612688	LEO1	Q8WVC0	666 aa	Predicted RBP	13.7	□□□□□ -0.22
PPP4R3B-204	ENST00000612688	CLIP2	Q9UDT6	1046 aa		13.7	□□□□□ -0.22
PPP4R3B-204	ENST00000612688		Q6ZUG5	572 aa		13.7	□□□□□ -0.22
PPP4R3B-204	ENST00000612688	FAM200A	Q8TCP9	573 aa		13.7	□□□□□ -0.22
PPP4R3B-204	ENST00000612688	AKAP2	Q9Y2D5	859 aa		13.7	□□□□□ -0.22
PPP4R3B-204	ENST00000612688	PDE8B	O95263	885 aa		13.69	□□□□□ -0.22
PPP4R3B-204	ENST00000612688	PHKA1	P46020	1223 aa		13.69	□□□□□ -0.22
PPP4R3B-204	ENST00000612688	ZNF165	P49910	485 aa		13.69	□□□□□ -0.22
PPP4R3B-204	ENST00000612688	ZSCAN25	Q6NSZ9	544 aa		13.69	□□□□□ -0.22
PPP4R3B-204	ENST00000612688	MAP4K1	Q92918	833 aa		13.69	□□□□□ -0.22
PPP4R3B-204	ENST00000612688	NOL10	Q9BSC4	688 aa	Known RBP	13.69	□□□□□ -0.22
PPP4R3B-204	ENST00000612688	PAG1	Q9NWQ8	432 aa		13.69	□□□□□ -0.22
PPP4R3B-204	ENST00000612688	ZAP70	P43403	619 aa		13.69	□□□□□ -0.22
PPP4R3B-204	ENST00000612688	ANKRD18A	Q8IVF6	992 aa		13.69	□□□□□ -0.22
PPP4R3B-204	ENST00000612688	CNBD1	Q8NA66	436 aa		13.69	□□□□□ -0.22
PPP4R3B-204	ENST00000612688	GJB4	Q9NTQ9	266 aa		13.69	□□□□□ -0.22
PPP4R3B-204	ENST00000612688	TPM3	P06753	285 aa		13.68	□□□□□ -0.22
PPP4R3B-204	ENST00000612688	GYS1	P13807	737 aa		13.68	□□□□□ -0.22
PPP4R3B-204	ENST00000612688	C11orf57	Q6ZUT1	292 aa	Predicted RBP	13.68	□□□□□ -0.22
PPP4R3B-204	ENST00000612688	GPHN	Q9NQX3	736 aa	Predicted RBP	13.68	□□□□□ -0.22

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