RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 MINPP1Q9UNW1 487 aa10.73□□□□□ -0.69
CCDC47-207ENST00000612558 MED23Q9ULK4 1368 aa10.72□□□□□ -0.69
CCDC47-207ENST00000612558 CCDC171Q6TFL3 1326 aa10.72□□□□□ -0.69
CCDC47-207ENST00000612558 POLRMTO00411 1230 aaKnown RBP10.72□□□□□ -0.69
CCDC47-207ENST00000612558 ZFYP08048 801 aaPredicted RBP10.72□□□□□ -0.69
CCDC47-207ENST00000612558 MCAMP43121 646 aa10.72□□□□□ -0.69
CCDC47-207ENST00000612558 ZAP70P43403 619 aa10.72□□□□□ -0.69
CCDC47-207ENST00000612558 PHKA1P46020 1223 aa10.72□□□□□ -0.69
CCDC47-207ENST00000612558 UBE4AQ14139 1066 aa10.72□□□□□ -0.69
CCDC47-207ENST00000612558 SCARF1Q14162 830 aa10.72□□□□□ -0.69
CCDC47-207ENST00000612558 TTF1Q15361 905 aaPredicted RBP10.72□□□□□ -0.69
CCDC47-207ENST00000612558 MCMDC2Q4G0Z9 681 aa10.72□□□□□ -0.69
CCDC47-207ENST00000612558 CAMKK2Q96RR4 588 aa10.72□□□□□ -0.69
CCDC47-207ENST00000612558 ANKRD2Q9GZV1 360 aa10.72□□□□□ -0.69
CCDC47-207ENST00000612558 ANTXR1Q9H6X2 564 aa10.72□□□□□ -0.69
CCDC47-207ENST00000612558 HELLSQ9NRZ9 838 aa10.72□□□□□ -0.69
CCDC47-207ENST00000612558 TAF1P21675 1872 aa10.72□□□□□ -0.69
CCDC47-207ENST00000612558 AKAP11Q9UKA4 1901 aa10.71□□□□□ -0.69
CCDC47-207ENST00000612558 ARAP2Q8WZ64 1704 aa10.71□□□□□ -0.69
CCDC47-207ENST00000612558 RNF113AO15541 343 aaKnown RBP10.71□□□□□ -0.69
CCDC47-207ENST00000612558 PTH1RQ03431 593 aa10.71□□□□□ -0.69
CCDC47-207ENST00000612558 DDR1Q08345 913 aa10.71□□□□□ -0.69
CCDC47-207ENST00000612558 MFSD10Q14728 455 aa10.71□□□□□ -0.69
CCDC47-207ENST00000612558 CRY2Q49AN0 593 aa10.71□□□□□ -0.69
CCDC47-207ENST00000612558 MAP4K1Q92918 833 aa10.71□□□□□ -0.69
CCDC47-207ENST00000612558 PALD1Q9ULE6 856 aa10.71□□□□□ -0.69
CCDC47-207ENST00000612558 COL4A1P02462 1669 aa10.7□□□□□ -0.7
CCDC47-207ENST00000612558 PNPLA7Q6ZV29 1317 aa10.7□□□□□ -0.7
CCDC47-207ENST00000612558 SNAP23O00161 211 aa10.7□□□□□ -0.7
CCDC47-207ENST00000612558 GTPBP6O43824 516 aaPredicted RBP10.7□□□□□ -0.7
CCDC47-207ENST00000612558 GRAPQ13588 217 aa10.7□□□□□ -0.7
CCDC47-207ENST00000612558 ZMYM1Q5SVZ6 1142 aa10.7□□□□□ -0.7
CCDC47-207ENST00000612558 LAPTM4BQ86VI4 370 aa10.7□□□□□ -0.7
CCDC47-207ENST00000612558 GRAPLQ8TC17 118 aaPredicted RBP10.7□□□□□ -0.7
CCDC47-207ENST00000612558 K7ELQ4 463 aaPredicted RBP10.69□□□□□ -0.7
CCDC47-207ENST00000612558 BCAMP50895 628 aa10.69□□□□□ -0.7
CCDC47-207ENST00000612558 EN1Q05925 392 aaPredicted RBP10.69□□□□□ -0.7
CCDC47-207ENST00000612558 NECTIN1Q15223 517 aa10.69□□□□□ -0.7
CCDC47-207ENST00000612558 EZH2Q15910 746 aaKnown RBP10.69□□□□□ -0.7
CCDC47-207ENST00000612558 ZSCAN25Q6NSZ9 544 aa10.69□□□□□ -0.7
CCDC47-207ENST00000612558 TYW1BQ6NUM6 668 aa10.69□□□□□ -0.7
CCDC47-207ENST00000612558 PI16Q6UXB8 463 aa10.69□□□□□ -0.7
CCDC47-207ENST00000612558 NYAP1Q6ZVC0 841 aa10.69□□□□□ -0.7
CCDC47-207ENST00000612558 ZNF589Q86UQ0 364 aaPredicted RBP10.69□□□□□ -0.7
CCDC47-207ENST00000612558 SPATA5Q8NB90 893 aa10.69□□□□□ -0.7
CCDC47-207ENST00000612558 RPGRQ92834 1020 aaKnown RBP10.69□□□□□ -0.7
CCDC47-207ENST00000612558 KCNB2Q92953 911 aa10.69□□□□□ -0.7
CCDC47-207ENST00000612558 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.69□□□□□ -0.73e-6■□□□□ 8.5
CCDC47-207ENST00000612558 HMG20BQ9P0W2 317 aa10.69□□□□□ -0.7
CCDC47-207ENST00000612558 TNRC6CQ9HCJ0 1690 aaKnown RBP10.69□□□□□ -0.7
CCDC47-207ENST00000612558 KLRG2A4D1S0 409 aaPredicted RBP10.69□□□□□ -0.7
CCDC47-207ENST00000612558 CD2BP2O95400 341 aaKnown RBP10.69□□□□□ -0.7
CCDC47-207ENST00000612558 CYP2E1P05181 493 aaPredicted RBP10.69□□□□□ -0.7
CCDC47-207ENST00000612558 ZKSCAN1P17029 563 aaPredicted RBP10.69□□□□□ -0.7
CCDC47-207ENST00000612558 KCNJ4P48050 445 aa10.69□□□□□ -0.7
CCDC47-207ENST00000612558 SF3B2Q13435 895 aaKnown RBP10.69□□□□□ -0.7
CCDC47-207ENST00000612558 SLC15A2Q16348 729 aa10.69□□□□□ -0.7
CCDC47-207ENST00000612558 CAVIN4Q5BKX8 364 aa10.69□□□□□ -0.7
CCDC47-207ENST00000612558 RBM17Q96I25 401 aaKnown RBP10.69□□□□□ -0.7
CCDC47-207ENST00000612558 SEC62Q99442 399 aaKnown RBP10.69□□□□□ -0.7
CCDC47-207ENST00000612558 GNL3LQ9NVN8 582 aaKnown RBP10.69□□□□□ -0.7
CCDC47-207ENST00000612558 RBM8AQ9Y5S9 174 aaKnown RBP10.69□□□□□ -0.7
CCDC47-207ENST00000612558 SNX14Q9Y5W7 946 aa10.69□□□□□ -0.7
CCDC47-207ENST00000612558 ZNF804BA4D1E1 1349 aa10.68□□□□□ -0.7
CCDC47-207ENST00000612558 CHGBP05060 677 aa10.68□□□□□ -0.7
CCDC47-207ENST00000612558 HOXA10P31260 410 aaPredicted RBP10.68□□□□□ -0.7
CCDC47-207ENST00000612558 NEK4P51957 841 aa10.68□□□□□ -0.7
CCDC47-207ENST00000612558 RASGRF1Q13972 1273 aa10.68□□□□□ -0.7
CCDC47-207ENST00000612558 RNF20Q5VTR2 975 aa10.68□□□□□ -0.7
CCDC47-207ENST00000612558 PRPF40BQ6NWY9 871 aaKnown RBP10.68□□□□□ -0.7
CCDC47-207ENST00000612558 BRIP1Q9BX63 1249 aa10.68□□□□□ -0.7
CCDC47-207ENST00000612558 STK32BQ9NY57 414 aa10.68□□□□□ -0.7
CCDC47-207ENST00000612558 PCDHGA10Q9Y5H3 936 aa10.68□□□□□ -0.7
CCDC47-207ENST00000612558 PARP3Q9Y6F1 533 aa10.68□□□□□ -0.7
CCDC47-207ENST00000612558 A0A1B0GUL6 1792 aa10.68□□□□□ -0.7
CCDC47-207ENST00000612558 BBOX1O75936 387 aa10.67□□□□□ -0.7
CCDC47-207ENST00000612558 ADD2P35612 726 aa10.67□□□□□ -0.7
CCDC47-207ENST00000612558 BAG6P46379 1132 aa10.67□□□□□ -0.7
CCDC47-207ENST00000612558 MCM2P49736 904 aa10.67□□□□□ -0.7
CCDC47-207ENST00000612558 UBE3CQ15386 1083 aa10.67□□□□□ -0.7
CCDC47-207ENST00000612558 WASHC4Q2M389 1173 aa10.67□□□□□ -0.7
CCDC47-207ENST00000612558 CREB3L3Q68CJ9 461 aa10.67□□□□□ -0.7
CCDC47-207ENST00000612558 CCDC129Q6ZRS4 1044 aa10.67□□□□□ -0.7
CCDC47-207ENST00000612558 APPBP2Q92624 585 aa10.67□□□□□ -0.7
CCDC47-207ENST00000612558 OSBP2Q969R2 916 aa10.67□□□□□ -0.7
CCDC47-207ENST00000612558 CRAMP1Q96RY5 1269 aa10.67□□□□□ -0.7
CCDC47-207ENST00000612558 DSCC1Q9BVC3 393 aa10.67□□□□□ -0.7
CCDC47-207ENST00000612558 PIH1D3Q9NQM4 214 aaKnown RBP10.67□□□□□ -0.7
CCDC47-207ENST00000612558 MYH7P12883 1935 aa10.66□□□□□ -0.7
CCDC47-207ENST00000612558 MAST3O60307 1309 aa10.66□□□□□ -0.7
CCDC47-207ENST00000612558 MMP10P09238 476 aa10.66□□□□□ -0.7
CCDC47-207ENST00000612558 GYG1P46976 350 aa10.66□□□□□ -0.7
CCDC47-207ENST00000612558 MAP3K12Q12852 859 aa10.66□□□□□ -0.7
CCDC47-207ENST00000612558 TSGA10IPQ3SY00 556 aa10.66□□□□□ -0.7
CCDC47-207ENST00000612558 SLFNL1Q499Z3 407 aa10.66□□□□□ -0.7
CCDC47-207ENST00000612558 SLC9C2Q5TAH2 1124 aa10.66□□□□□ -0.7
CCDC47-207ENST00000612558 FBXO33Q7Z6M2 555 aa10.66□□□□□ -0.7
CCDC47-207ENST00000612558 VPS37DQ86XT2 251 aa10.66□□□□□ -0.7
CCDC47-207ENST00000612558 FAM84BQ96KN1 310 aaPredicted RBP10.66□□□□□ -0.7
CCDC47-207ENST00000612558 TM6SF1Q9BZW5 370 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms