RNA–Protein interactions for RNA: ENST00000611614.4

COPS7B-223, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3 BASIC

Gene COPS7B, Length 2,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-223ENST00000611614 LARP1BQ659C4 914 aaKnown RBP16.37■□□□□ 0.21
COPS7B-223ENST00000611614 NEK1Q96PY6 1258 aa16.37■□□□□ 0.21
COPS7B-223ENST00000611614 SNAP23O00161 211 aa16.37■□□□□ 0.21
COPS7B-223ENST00000611614 MMP10P09238 476 aa16.37■□□□□ 0.21
COPS7B-223ENST00000611614 ARID4AP29374 1257 aaPredicted RBP16.37■□□□□ 0.21
COPS7B-223ENST00000611614 HELLSQ9NRZ9 838 aa16.37■□□□□ 0.21
COPS7B-223ENST00000611614 FIBPO43427 364 aa16.36■□□□□ 0.21
COPS7B-223ENST00000611614 DTNBO60941 627 aa16.36■□□□□ 0.21
COPS7B-223ENST00000611614 LETM1O95202 739 aaPredicted RBP16.36■□□□□ 0.21
COPS7B-223ENST00000611614 CHGBP05060 677 aa16.36■□□□□ 0.21
COPS7B-223ENST00000611614 ZFYP08048 801 aaPredicted RBP16.36■□□□□ 0.21
COPS7B-223ENST00000611614 MCAMP43121 646 aa16.36■□□□□ 0.21
COPS7B-223ENST00000611614 ZSCAN25Q6NSZ9 544 aa16.36■□□□□ 0.21
COPS7B-223ENST00000611614 SASS6Q6UVJ0 657 aa16.36■□□□□ 0.21
COPS7B-223ENST00000611614 DNM1Q05193 864 aaKnown RBP16.36■□□□□ 0.21
COPS7B-223ENST00000611614 SCARF1Q14162 830 aa16.36■□□□□ 0.21
COPS7B-223ENST00000611614 CRY2Q49AN0 593 aa16.36■□□□□ 0.21
COPS7B-223ENST00000611614 ZMYND15Q9H091 742 aa16.36■□□□□ 0.21
COPS7B-223ENST00000611614 RNF113AO15541 343 aaKnown RBP16.35■□□□□ 0.21
COPS7B-223ENST00000611614 BRIP1Q9BX63 1249 aa16.35■□□□□ 0.21
COPS7B-223ENST00000611614 ANKIB1Q9P2G1 1089 aa16.35■□□□□ 0.21
COPS7B-223ENST00000611614 CYP21A2P08686 494 aa16.35■□□□□ 0.21
COPS7B-223ENST00000611614 BCAMP50895 628 aa16.35■□□□□ 0.21
COPS7B-223ENST00000611614 MSL1Q68DK7 614 aa16.35■□□□□ 0.21
COPS7B-223ENST00000611614 SPATA5Q8NB90 893 aa16.35■□□□□ 0.21
COPS7B-223ENST00000611614 UQCRHLA0A096LP55 91 aa16.34■□□□□ 0.21
COPS7B-223ENST00000611614 UQCRHP07919 91 aa16.34■□□□□ 0.21
COPS7B-223ENST00000611614 DEFB132Q7Z7B7 95 aa16.34■□□□□ 0.21
COPS7B-223ENST00000611614 SPEF2Q9C093 1822 aa16.34■□□□□ 0.21
COPS7B-223ENST00000611614 BBOX1O75936 387 aa16.34■□□□□ 0.21
COPS7B-223ENST00000611614 PDE6BP35913 854 aa16.34■□□□□ 0.21
COPS7B-223ENST00000611614 WASHC4Q2M389 1173 aa16.34■□□□□ 0.21
COPS7B-223ENST00000611614 ZMYM1Q5SVZ6 1142 aa16.34■□□□□ 0.21
COPS7B-223ENST00000611614 PI16Q6UXB8 463 aa16.34■□□□□ 0.21
COPS7B-223ENST00000611614 CCDC125Q86Z20 511 aa16.34■□□□□ 0.21
COPS7B-223ENST00000611614 RNF214Q8ND24 703 aa16.34■□□□□ 0.21
COPS7B-223ENST00000611614 PTMAP06454 111 aaKnown RBP16.33■□□□□ 0.2
COPS7B-223ENST00000611614 KIAA2012Q0VF49 1180 aa16.33■□□□□ 0.2
COPS7B-223ENST00000611614 DSCC1Q9BVC3 393 aa16.33■□□□□ 0.2
COPS7B-223ENST00000611614 IDH1O75874 414 aaKnown RBP16.33■□□□□ 0.2
COPS7B-223ENST00000611614 STK3Q13188 491 aa16.33■□□□□ 0.2
COPS7B-223ENST00000611614 Q6ZUG5 572 aa16.33■□□□□ 0.2
COPS7B-223ENST00000611614 CDC37L1Q7L3B6 337 aa16.33■□□□□ 0.2
COPS7B-223ENST00000611614 CRAMP1Q96RY5 1269 aa16.33■□□□□ 0.2
COPS7B-223ENST00000611614 HMGB1P09429 215 aaKnown RBP16.32■□□□□ 0.2
COPS7B-223ENST00000611614 RASGRF1Q13972 1273 aa16.32■□□□□ 0.2
COPS7B-223ENST00000611614 GTF3C6Q969F1 213 aa16.32■□□□□ 0.2
COPS7B-223ENST00000611614 ZNF804BA4D1E1 1349 aa16.32■□□□□ 0.2
COPS7B-223ENST00000611614 HOXA10P31260 410 aaPredicted RBP16.31■□□□□ 0.2
COPS7B-223ENST00000611614 GYG1P46976 350 aa16.31■□□□□ 0.2
COPS7B-223ENST00000611614 LEMD3Q9Y2U8 911 aa16.31■□□□□ 0.2
COPS7B-223ENST00000611614 TNRC6CQ9HCJ0 1690 aaKnown RBP16.31■□□□□ 0.2
COPS7B-223ENST00000611614 KLRG2A4D1S0 409 aaPredicted RBP16.31■□□□□ 0.2
COPS7B-223ENST00000611614 KRT85P78386 507 aa16.31■□□□□ 0.2
COPS7B-223ENST00000611614 MAP3K12Q12852 859 aa16.31■□□□□ 0.2
COPS7B-223ENST00000611614 TMC4Q7Z404 712 aa16.31■□□□□ 0.2
COPS7B-223ENST00000611614 TMX4Q9H1E5 349 aaPredicted RBP16.31■□□□□ 0.2
COPS7B-223ENST00000611614 XDHP47989 1333 aa16.31■□□□□ 0.2
COPS7B-223ENST00000611614 STOX1Q6ZVD7 989 aa16.3■□□□□ 0.2
COPS7B-223ENST00000611614 TAF1P21675 1872 aa16.3■□□□□ 0.2
COPS7B-223ENST00000611614 PDE4CQ08493 712 aa16.3■□□□□ 0.2
COPS7B-223ENST00000611614 TPRNQ4KMQ1 711 aa16.3■□□□□ 0.2
COPS7B-223ENST00000611614 SLC9C2Q5TAH2 1124 aa16.3■□□□□ 0.2
COPS7B-223ENST00000611614 APPBP2Q92624 585 aa16.3■□□□□ 0.2
COPS7B-223ENST00000611614 COL4A1P02462 1669 aa16.3■□□□□ 0.2
COPS7B-223ENST00000611614 NPR1P16066 1061 aa16.29■□□□□ 0.2
COPS7B-223ENST00000611614 ALDH1B1P30837 517 aa16.29■□□□□ 0.2
COPS7B-223ENST00000611614 HIBADHP31937 336 aaKnown RBP16.29■□□□□ 0.2
COPS7B-223ENST00000611614 SLFNL1Q499Z3 407 aa16.29■□□□□ 0.2
COPS7B-223ENST00000611614 DHX32Q7L7V1 743 aaKnown RBP16.29■□□□□ 0.2
COPS7B-223ENST00000611614 FERMT3Q86UX7 667 aa16.29■□□□□ 0.2
COPS7B-223ENST00000611614 DENND2AQ9ULE3 1009 aa16.29■□□□□ 0.2
COPS7B-223ENST00000611614 ELP1O95163 1332 aa16.29■□□□□ 0.2
COPS7B-223ENST00000611614 CASZ1Q86V15 1759 aa16.29■□□□□ 0.2
COPS7B-223ENST00000611614 MAST3O60307 1309 aa16.29■□□□□ 0.2
COPS7B-223ENST00000611614 FAM84BQ96KN1 310 aaPredicted RBP16.29■□□□□ 0.2
COPS7B-223ENST00000611614 LRP2BPQ9P2M1 347 aa16.29■□□□□ 0.2
COPS7B-223ENST00000611614 IQSEC3Q9UPP2 1182 aaPredicted RBP16.29■□□□□ 0.2
COPS7B-223ENST00000611614 ARAP2Q8WZ64 1704 aa16.29■□□□□ 0.2
COPS7B-223ENST00000611614 SEMA3EO15041 775 aa16.28■□□□□ 0.2
COPS7B-223ENST00000611614 HSPD1P10809 573 aaKnown RBP16.28■□□□□ 0.2
COPS7B-223ENST00000611614 TTC6Q86TZ1 520 aa16.28■□□□□ 0.2
COPS7B-223ENST00000611614 BRF1Q92994 677 aa16.28■□□□□ 0.2
COPS7B-223ENST00000611614 PIH1D3Q9NQM4 214 aaKnown RBP16.28■□□□□ 0.2
COPS7B-223ENST00000611614 FGD1P98174 961 aa16.28■□□□□ 0.2
COPS7B-223ENST00000611614 FAM13BQ9NYF5 915 aa16.28■□□□□ 0.2
COPS7B-223ENST00000611614 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.28■□□□□ 0.28e-7■□□□□ 9.2
COPS7B-223ENST00000611614 JAK2O60674 1132 aa16.27■□□□□ 0.2
COPS7B-223ENST00000611614 PFKFB2O60825 505 aa16.27■□□□□ 0.2
COPS7B-223ENST00000611614 SRGNP10124 158 aa16.27■□□□□ 0.2
COPS7B-223ENST00000611614 RBM10P98175 930 aaKnown RBP16.27■□□□□ 0.2
COPS7B-223ENST00000611614 UBE3CQ15386 1083 aa16.27■□□□□ 0.2
COPS7B-223ENST00000611614 FBXO33Q7Z6M2 555 aa16.27■□□□□ 0.2
COPS7B-223ENST00000611614 PRIMPOLQ96LW4 560 aa16.27■□□□□ 0.2
COPS7B-223ENST00000611614 LLPHQ9BRT6 129 aaKnown RBP16.27■□□□□ 0.2
COPS7B-223ENST00000611614 WTIPA6NIX2 430 aaPredicted RBP16.27■□□□□ 0.19
COPS7B-223ENST00000611614 ATP2B4P23634 1241 aa16.27■□□□□ 0.19
COPS7B-223ENST00000611614 ADD2P35612 726 aa16.27■□□□□ 0.19
COPS7B-223ENST00000611614 EXOSC10Q01780 885 aaKnown RBP16.27■□□□□ 0.19
COPS7B-223ENST00000611614 MASTLQ96GX5 879 aa16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms