RNA–Protein interactions for RNA: ENST00000610538.4

TP53-219, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,580 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-219ENST00000610538 HMGB2P26583 209 aaKnown RBP14.65□□□□□ -0.06
TP53-219ENST00000610538 XDHP47989 1333 aa14.65□□□□□ -0.06
TP53-219ENST00000610538 CUL4AQ13619 759 aa14.65□□□□□ -0.06
TP53-219ENST00000610538 LCORLQ8N3X6 602 aa14.65□□□□□ -0.06
TP53-219ENST00000610538 STK32BQ9NY57 414 aa14.65□□□□□ -0.06
TP53-219ENST00000610538 TOB2Q14106 344 aaPredicted RBP14.64□□□□□ -0.07
TP53-219ENST00000610538 KRT32Q14532 448 aa14.64□□□□□ -0.07
TP53-219ENST00000610538 Q6ZUG5 572 aa14.64□□□□□ -0.07
TP53-219ENST00000610538 ZNF384Q8TF68 577 aa14.64□□□□□ -0.07
TP53-219ENST00000610538 POLLQ9UGP5 575 aa14.64□□□□□ -0.07
TP53-219ENST00000610538 ZNF213O14771 459 aa14.64□□□□□ -0.07
TP53-219ENST00000610538 RIMBP2O15034 1052 aa14.64□□□□□ -0.07
TP53-219ENST00000610538 BBOX1O75936 387 aa14.64□□□□□ -0.07
TP53-219ENST00000610538 ECM2O94769 699 aaPredicted RBP14.64□□□□□ -0.07
TP53-219ENST00000610538 IMMTQ16891 758 aaKnown RBP14.64□□□□□ -0.07
TP53-219ENST00000610538 FOXD4L6Q3SYB3 417 aaPredicted RBP14.64□□□□□ -0.07
TP53-219ENST00000610538 FOXD4L3Q6VB84 417 aaPredicted RBP14.64□□□□□ -0.07
TP53-219ENST00000610538 TICAM2Q86XR7 235 aa14.64□□□□□ -0.07
TP53-219ENST00000610538 HOXA10P31260 410 aaPredicted RBP14.63□□□□□ -0.07
TP53-219ENST00000610538 RAB3GAP1Q15042 981 aa14.63□□□□□ -0.07
TP53-219ENST00000610538 SDR42E1Q8WUS8 393 aa14.63□□□□□ -0.07
TP53-219ENST00000610538 NAP1L2Q9ULW6 460 aaPredicted RBP14.63□□□□□ -0.07
TP53-219ENST00000610538 PPFIA3O75145 1194 aa14.63□□□□□ -0.07
TP53-219ENST00000610538 DYNLL1P63167 89 aaKnown RBP14.63□□□□□ -0.07
TP53-219ENST00000610538 NKX2-3Q8TAU0 364 aa14.63□□□□□ -0.07
TP53-219ENST00000610538 BRF1Q92994 677 aa14.63□□□□□ -0.07
TP53-219ENST00000610538 GPHNQ9NQX3 736 aaPredicted RBP14.63□□□□□ -0.07
TP53-219ENST00000610538 CTNNA3Q9UI47 895 aa14.63□□□□□ -0.07
TP53-219ENST00000610538 GGA1Q9UJY5 639 aa14.63□□□□□ -0.07
TP53-219ENST00000610538 LEMD3Q9Y2U8 911 aa14.63□□□□□ -0.07
TP53-219ENST00000610538 KLRG2A4D1S0 409 aaPredicted RBP14.62□□□□□ -0.07
TP53-219ENST00000610538 PPEF1O14829 653 aaPredicted RBP14.62□□□□□ -0.07
TP53-219ENST00000610538 CHRNA5P30532 468 aa14.62□□□□□ -0.07
TP53-219ENST00000610538 BAG6P46379 1132 aa14.62□□□□□ -0.07
TP53-219ENST00000610538 CWC22Q9HCG8 908 aaKnown RBP14.62□□□□□ -0.07
TP53-219ENST00000610538 CIZ1Q9ULV3 898 aaPredicted RBP14.62□□□□□ -0.07
TP53-219ENST00000610538 SLC4A4Q9Y6R1 1079 aa14.62□□□□□ -0.07
TP53-219ENST00000610538 SMIM22K7EJ46 135 aa14.62□□□□□ -0.07
TP53-219ENST00000610538 MECOMQ03112 1051 aa14.62□□□□□ -0.07
TP53-219ENST00000610538 GRIK5Q16478 980 aa14.62□□□□□ -0.07
TP53-219ENST00000610538 NAA16Q6N069 864 aaPredicted RBP14.62□□□□□ -0.07
TP53-219ENST00000610538 CRAMP1Q96RY5 1269 aa14.62□□□□□ -0.07
TP53-219ENST00000610538 EPB41L4AQ9HCS5 686 aaPredicted RBP14.62□□□□□ -0.07
TP53-219ENST00000610538 DHX32Q7L7V1 743 aaKnown RBP14.61□□□□□ -0.07
TP53-219ENST00000610538 IFNL3Q8IZI9 196 aa14.61□□□□□ -0.07
TP53-219ENST00000610538 TBC1D16Q8TBP0 767 aa14.61□□□□□ -0.07
TP53-219ENST00000610538 ZDHHC9Q9Y397 364 aa14.61□□□□□ -0.07
TP53-219ENST00000610538 TNS1Q9HBL0 1735 aaKnown RBP14.61□□□□□ -0.07
TP53-219ENST00000610538 IRS2Q9Y4H2 1338 aa14.61□□□□□ -0.07
TP53-219ENST00000610538 MYH7P12883 1935 aa14.61□□□□□ -0.07
TP53-219ENST00000610538 GSG1L2A8MUP6 293 aa14.61□□□□□ -0.07
TP53-219ENST00000610538 PATL2C9JE40 543 aaKnown RBP14.61□□□□□ -0.07
TP53-219ENST00000610538 CTDSPL2Q05D32 466 aa14.61□□□□□ -0.07
TP53-219ENST00000610538 ST3GAL1Q11201 340 aa14.61□□□□□ -0.07
TP53-219ENST00000610538 NBPF3Q9H094 633 aa14.61□□□□□ -0.07
TP53-219ENST00000610538 NAPBQ9H115 298 aa14.61□□□□□ -0.07
TP53-219ENST00000610538 ARAP2Q8WZ64 1704 aa14.61□□□□□ -0.07
TP53-219ENST00000610538 MCM4P33991 863 aa14.6□□□□□ -0.07
TP53-219ENST00000610538 PDE6BP35913 854 aa14.6□□□□□ -0.07
TP53-219ENST00000610538 AATFQ9NY61 560 aaKnown RBP eCLIP14.6□□□□□ -0.07
TP53-219ENST00000610538 MAGEB6P1A0A0J9YX57 407 aa14.6□□□□□ -0.07
TP53-219ENST00000610538 NPR1P16066 1061 aa14.6□□□□□ -0.07
TP53-219ENST00000610538 TDO2P48775 406 aa14.6□□□□□ -0.07
TP53-219ENST00000610538 APOBRQ0VD83 1088 aa14.6□□□□□ -0.07
TP53-219ENST00000610538 SLC4A8Q2Y0W8 1093 aa14.6□□□□□ -0.07
TP53-219ENST00000610538 C2CD5Q86YS7 1000 aa14.6□□□□□ -0.07
TP53-219ENST00000610538 TBC1D10CQ8IV04 446 aa14.6□□□□□ -0.07
TP53-219ENST00000610538 NSUN4Q96CB9 384 aaKnown RBP14.6□□□□□ -0.07
TP53-219ENST00000610538 INTS4Q96HW7 963 aaKnown RBP14.6□□□□□ -0.07
TP53-219ENST00000610538 ZNF804AQ7Z570 1209 aa14.59□□□□□ -0.07
TP53-219ENST00000610538 RAB11FIP4Q86YS3 637 aa14.59□□□□□ -0.07
TP53-219ENST00000610538 CD209Q9NNX6 404 aa14.59□□□□□ -0.07
TP53-219ENST00000610538 SMC3Q9UQE7 1217 aa14.59□□□□□ -0.07
TP53-219ENST00000610538 SPDYE4A6NLX3 237 aa14.59□□□□□ -0.07
TP53-219ENST00000610538 MINDY4BA8MYZ0 360 aa14.59□□□□□ -0.07
TP53-219ENST00000610538 DIXDC1Q155Q3 683 aa14.59□□□□□ -0.07
TP53-219ENST00000610538 FBXW7Q969H0 707 aa14.59□□□□□ -0.07
TP53-219ENST00000610538 A0A1B0GUL6 1792 aa14.58□□□□□ -0.08
TP53-219ENST00000610538 ATP2B4P23634 1241 aa14.58□□□□□ -0.08
TP53-219ENST00000610538 CCT2P78371 535 aaKnown RBP14.58□□□□□ -0.08
TP53-219ENST00000610538 NUCB2P80303 420 aa14.58□□□□□ -0.08
TP53-219ENST00000610538 EXOSC10Q01780 885 aaKnown RBP14.58□□□□□ -0.08
TP53-219ENST00000610538 ANKRD1Q15327 319 aa14.58□□□□□ -0.08
TP53-219ENST00000610538 DZIP1Q86YF9 867 aaKnown RBP14.58□□□□□ -0.08
TP53-219ENST00000610538 SP8Q8IXZ3 490 aa14.58□□□□□ -0.08
TP53-219ENST00000610538 TDRD7Q8NHU6 1098 aaKnown RBP14.58□□□□□ -0.08
TP53-219ENST00000610538 MASTLQ96GX5 879 aa14.58□□□□□ -0.08
TP53-219ENST00000610538 TOMM22Q9NS69 142 aa14.58□□□□□ -0.08
TP53-219ENST00000610538 ATP6V0A2Q9Y487 856 aa14.58□□□□□ -0.08
TP53-219ENST00000610538 CYP2D7A0A087X1C5 515 aa14.58□□□□□ -0.08
TP53-219ENST00000610538 B4E1Z4 1266 aa14.58□□□□□ -0.08
TP53-219ENST00000610538 SEMA3EO15041 775 aa14.58□□□□□ -0.08
TP53-219ENST00000610538 HMGB1P09429 215 aaKnown RBP14.58□□□□□ -0.08
TP53-219ENST00000610538 GJB2P29033 226 aa14.58□□□□□ -0.08
TP53-219ENST00000610538 ALDH1B1P30837 517 aa14.58□□□□□ -0.08
TP53-219ENST00000610538 DOK7Q18PE1 504 aa14.58□□□□□ -0.08
TP53-219ENST00000610538 RRP12Q5JTH9 1297 aaKnown RBP14.58□□□□□ -0.08
TP53-219ENST00000610538 RALYLQ86SE5 291 aaKnown RBP14.58□□□□□ -0.08
TP53-219ENST00000610538 ZSCAN31Q96LW9 406 aaPredicted RBP14.58□□□□□ -0.08
TP53-219ENST00000610538 H0YIN7 160 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms