RNA–Protein interactions for RNA: ENST00000604740.5

LAMA4-222, Transcript of laminin subunit alpha 4, human

TSL 2

Gene LAMA4, Length 694 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LAMA4-222	ENST00000604740	CDPF1	Q6NVV7	123 aa		7.6	□□□□□ -1.19
LAMA4-222	ENST00000604740	PAOX	Q6QHF9	649 aa		7.6	□□□□□ -1.19
LAMA4-222	ENST00000604740	C2CD4A	Q8NCU7	369 aa	Predicted RBP	7.6	□□□□□ -1.19
LAMA4-222	ENST00000604740	TCF12	Q99081	682 aa		7.6	□□□□□ -1.19
LAMA4-222	ENST00000604740	OSBPL1A	Q9BXW6	950 aa		7.6	□□□□□ -1.19
LAMA4-222	ENST00000604740	NRSN2	Q9GZP1	204 aa		7.6	□□□□□ -1.19
LAMA4-222	ENST00000604740	LEMD3	Q9Y2U8	911 aa		7.6	□□□□□ -1.19
LAMA4-222	ENST00000604740	WNT11	O96014	354 aa		7.59	□□□□□ -1.19
LAMA4-222	ENST00000604740	NEFL	P07196	543 aa		7.59	□□□□□ -1.19
LAMA4-222	ENST00000604740	ADH5	P11766	374 aa		7.59	□□□□□ -1.19
LAMA4-222	ENST00000604740	MAOB	P27338	520 aa		7.59	□□□□□ -1.19
LAMA4-222	ENST00000604740	SOX4	Q06945	474 aa	Predicted RBP	7.59	□□□□□ -1.19
LAMA4-222	ENST00000604740	ZNF423	Q2M1K9	1284 aa		7.59	□□□□□ -1.19
LAMA4-222	ENST00000604740	YIPF2	Q9BWQ6	316 aa		7.59	□□□□□ -1.19
LAMA4-222	ENST00000604740	PAX4	O43316	350 aa		7.58	□□□□□ -1.2
LAMA4-222	ENST00000604740	CYP11A1	P05108	521 aa		7.58	□□□□□ -1.2
LAMA4-222	ENST00000604740	POU4F3	Q15319	338 aa		7.58	□□□□□ -1.2
LAMA4-222	ENST00000604740	KRTAP4-12	Q9BQ66	201 aa		7.58	□□□□□ -1.2
LAMA4-222	ENST00000604740	NPHS2	Q9NP85	383 aa		7.58	□□□□□ -1.2
LAMA4-222	ENST00000604740	CTSB	P07858	339 aa		7.57	□□□□□ -1.2
LAMA4-222	ENST00000604740	ORC1	Q13415	861 aa		7.57	□□□□□ -1.2
LAMA4-222	ENST00000604740	ECM1	Q16610	540 aa		7.57	□□□□□ -1.2
LAMA4-222	ENST00000604740	HP1BP3	Q5SSJ5	553 aa	Predicted RBP	7.57	□□□□□ -1.2
LAMA4-222	ENST00000604740	TBC1D32	Q96NH3	1257 aa		7.57	□□□□□ -1.2
LAMA4-222	ENST00000604740	EHD4	Q9H223	541 aa		7.57	□□□□□ -1.2
LAMA4-222	ENST00000604740	CPNE3	O75131	537 aa	Known RBP	7.56	□□□□□ -1.2
LAMA4-222	ENST00000604740	TAL1	P17542	331 aa	Predicted RBP	7.56	□□□□□ -1.2
LAMA4-222	ENST00000604740	RAB6A	P20340	208 aa		7.56	□□□□□ -1.2
LAMA4-222	ENST00000604740	ARHGAP4	P98171	946 aa		7.56	□□□□□ -1.2
LAMA4-222	ENST00000604740	PDE3B	Q13370	1112 aa		7.56	□□□□□ -1.2
LAMA4-222	ENST00000604740	AKAP4	Q5JQC9	854 aa		7.56	□□□□□ -1.2
LAMA4-222	ENST00000604740	KIAA0319	Q5VV43	1072 aa		7.56	□□□□□ -1.2
LAMA4-222	ENST00000604740	SHISA5	Q8N114	240 aa		7.56	□□□□□ -1.2
LAMA4-222	ENST00000604740	DDX54	Q8TDD1	881 aa	Known RBP	7.56	□□□□□ -1.2
LAMA4-222	ENST00000604740	CORO1B	Q9BR76	489 aa		7.56	□□□□□ -1.2
LAMA4-222	ENST00000604740	ZNF576	Q9H609	170 aa		7.56	□□□□□ -1.2
LAMA4-222	ENST00000604740	RAD18	Q9NS91	495 aa		7.56	□□□□□ -1.2
LAMA4-222	ENST00000604740	ANGEL1	Q9UNK9	670 aa	Known RBP	7.56	□□□□□ -1.2
LAMA4-222	ENST00000604740	AP4E1	Q9UPM8	1137 aa		7.56	□□□□□ -1.2
LAMA4-222	ENST00000604740	ACTL7B	Q9Y614	415 aa		7.56	□□□□□ -1.2
LAMA4-222	ENST00000604740	B3GALT4	O96024	378 aa		7.55	□□□□□ -1.2
LAMA4-222	ENST00000604740	FOSL1	P15407	271 aa		7.55	□□□□□ -1.2
LAMA4-222	ENST00000604740	CPSF6	Q16630	551 aa	Known RBP eCLIP	7.55	□□□□□ -1.2
LAMA4-222	ENST00000604740	DYM	Q7RTS9	669 aa		7.55	□□□□□ -1.2
LAMA4-222	ENST00000604740	TMC1	Q8TDI8	760 aa		7.55	□□□□□ -1.2
LAMA4-222	ENST00000604740	EZH1	Q92800	747 aa	Predicted RBP	7.55	□□□□□ -1.2
LAMA4-222	ENST00000604740	FAM129B	Q96TA1	746 aa		7.55	□□□□□ -1.2
LAMA4-222	ENST00000604740	TRIM56	Q9BRZ2	755 aa	Known RBP	7.55	□□□□□ -1.2
LAMA4-222	ENST00000604740	METTL22	Q9BUU2	404 aa	Predicted RBP	7.55	□□□□□ -1.2
LAMA4-222	ENST00000604740	ZFYVE1	Q9HBF4	777 aa		7.55	□□□□□ -1.2
LAMA4-222	ENST00000604740	PRKAG2	Q9UGJ0	569 aa		7.55	□□□□□ -1.2
LAMA4-222	ENST00000604740	ECEL1	O95672	775 aa		7.54	□□□□□ -1.2
LAMA4-222	ENST00000604740	ADM	P35318	185 aa		7.54	□□□□□ -1.2
LAMA4-222	ENST00000604740	LCE3B	Q5TA77	95 aa		7.54	□□□□□ -1.2
LAMA4-222	ENST00000604740	ZAR1	Q86SH2	424 aa		7.54	□□□□□ -1.2
LAMA4-222	ENST00000604740	KRTAP1-3	Q8IUG1	177 aa		7.54	□□□□□ -1.2
LAMA4-222	ENST00000604740	ARID3A	Q99856	593 aa		7.54	□□□□□ -1.2
LAMA4-222	ENST00000604740	NFIC	P08651	508 aa		7.53	□□□□□ -1.2
LAMA4-222	ENST00000604740	ITPKA	P23677	461 aa		7.53	□□□□□ -1.2
LAMA4-222	ENST00000604740	PDE3A	Q14432	1141 aa		7.53	□□□□□ -1.2
LAMA4-222	ENST00000604740	MSMP	Q1L6U9	139 aa		7.53	□□□□□ -1.2
LAMA4-222	ENST00000604740	FAM170B	A6NMN3	283 aa		7.52	□□□□□ -1.21
LAMA4-222	ENST00000604740	GPR182	O15218	404 aa		7.52	□□□□□ -1.21
LAMA4-222	ENST00000604740	CYP26A1	O43174	497 aa		7.52	□□□□□ -1.21
LAMA4-222	ENST00000604740	GADD45B	O75293	160 aa	Predicted RBP	7.52	□□□□□ -1.21
LAMA4-222	ENST00000604740	MAP7	Q14244	749 aa		7.52	□□□□□ -1.21
LAMA4-222	ENST00000604740	CITED4	Q96RK1	184 aa		7.52	□□□□□ -1.21
LAMA4-222	ENST00000604740	NIF3L1	Q9GZT8	377 aa		7.52	□□□□□ -1.21
LAMA4-222	ENST00000604740	SEMA6C	Q9H3T2	930 aa		7.52	□□□□□ -1.21
LAMA4-222	ENST00000604740	ABCB6	Q9NP58	842 aa		7.52	□□□□□ -1.21
LAMA4-222	ENST00000604740	FAM105A	Q9NUU6	356 aa		7.52	□□□□□ -1.21
LAMA4-222	ENST00000604740	KIR2DP1	A0A0G2JNF4	349 aa	Predicted RBP	7.51	□□□□□ -1.21
LAMA4-222	ENST00000604740	EIF1AY	O14602	144 aa	Known RBP	7.51	□□□□□ -1.21
LAMA4-222	ENST00000604740	CCDC74A	Q96AQ1	378 aa		7.51	□□□□□ -1.21
LAMA4-222	ENST00000604740	GOLGA2P5	Q9HBQ8	144 aa		7.51	□□□□□ -1.21
LAMA4-222	ENST00000604740	CCDC39	Q9UFE4	941 aa		7.51	□□□□□ -1.21
LAMA4-222	ENST00000604740	ASPA	P45381	313 aa		7.5	□□□□□ -1.21
LAMA4-222	ENST00000604740	AP3B2	Q13367	1082 aa		7.5	□□□□□ -1.21
LAMA4-222	ENST00000604740	TXNDC2	Q86VQ3	553 aa		7.5	□□□□□ -1.21
LAMA4-222	ENST00000604740	VSIG10L	Q86VR7	867 aa		7.5	□□□□□ -1.21
LAMA4-222	ENST00000604740	ABI1	Q8IZP0	508 aa		7.5	□□□□□ -1.21
LAMA4-222	ENST00000604740	RETREG2	Q8NC44	543 aa		7.5	□□□□□ -1.21
LAMA4-222	ENST00000604740	GATA6	Q92908	595 aa		7.5	□□□□□ -1.21
LAMA4-222	ENST00000604740	DNAJC25	Q9H1X3	360 aa		7.5	□□□□□ -1.21
LAMA4-222	ENST00000604740	ACSS3	Q9H6R3	686 aa		7.5	□□□□□ -1.21
LAMA4-222	ENST00000604740	DAGLA	Q9Y4D2	1042 aa		7.5	□□□□□ -1.21
LAMA4-222	ENST00000604740	AOC2	O75106	756 aa		7.49	□□□□□ -1.21
LAMA4-222	ENST00000604740	TXK	P42681	527 aa		7.49	□□□□□ -1.21
LAMA4-222	ENST00000604740	PTPN12	Q05209	780 aa	Known RBP	7.49	□□□□□ -1.21
LAMA4-222	ENST00000604740	DUSP27	Q5VZP5	1158 aa		7.49	□□□□□ -1.21
LAMA4-222	ENST00000604740	PRPF40B	Q6NWY9	871 aa	Known RBP	7.49	□□□□□ -1.21
LAMA4-222	ENST00000604740	KRTAP19-1	Q8IUB9	90 aa		7.49	□□□□□ -1.21
LAMA4-222	ENST00000604740	WDR18	Q9BV38	432 aa		7.49	□□□□□ -1.21
LAMA4-222	ENST00000604740	LRRC4C	Q9HCJ2	640 aa		7.49	□□□□□ -1.21
LAMA4-222	ENST00000604740	ADGRE2	Q9UHX3	823 aa		7.49	□□□□□ -1.21
LAMA4-222	ENST00000604740	RNF114	Q9Y508	228 aa		7.49	□□□□□ -1.21
LAMA4-222	ENST00000604740	TMEM238L	A0A1B0GVL6	79 aa		7.48	□□□□□ -1.21
LAMA4-222	ENST00000604740	PRNP	P04156	253 aa		7.48	□□□□□ -1.21
LAMA4-222	ENST00000604740	ZNF157	P51786	506 aa	Predicted RBP	7.48	□□□□□ -1.21
LAMA4-222	ENST00000604740	CYP27A1	Q02318	531 aa		7.48	□□□□□ -1.21

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