RNA–Protein interactions for RNA: ENST00000604689.1

TUBE1-207, Transcript of tubulin epsilon 1, humanhuman

Gene TUBE1, Length 3,610 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-207ENST00000604689 ARHGAP27Q6ZUM4 889 aa8.25□□□□□ -1.09
TUBE1-207ENST00000604689 C14orf80Q86SX3 495 aa8.25□□□□□ -1.09
TUBE1-207ENST00000604689 RBM42Q9BTD8 480 aaKnown RBP8.25□□□□□ -1.09
TUBE1-207ENST00000604689 RRP7AQ9Y3A4 280 aaKnown RBP8.25□□□□□ -1.09
TUBE1-207ENST00000604689 ZBBXA8MT70 800 aa8.24□□□□□ -1.09
TUBE1-207ENST00000604689 EVI5O60447 810 aa8.24□□□□□ -1.09
TUBE1-207ENST00000604689 FGFR1OPO95684 399 aaKnown RBP8.24□□□□□ -1.09
TUBE1-207ENST00000604689 FOSP01100 380 aaPredicted RBP8.24□□□□□ -1.09
TUBE1-207ENST00000604689 CDR1P51861 262 aa8.24□□□□□ -1.09
TUBE1-207ENST00000604689 PPP4CP60510 307 aa8.24□□□□□ -1.09
TUBE1-207ENST00000604689 WDR43Q15061 677 aaKnown RBP eCLIP8.24□□□□□ -1.09
TUBE1-207ENST00000604689 MCTP2Q6DN12 878 aa8.24□□□□□ -1.09
TUBE1-207ENST00000604689 ANKRD13DQ6ZTN6 518 aa8.24□□□□□ -1.09
TUBE1-207ENST00000604689 PODNQ7Z5L7 613 aa8.24□□□□□ -1.09
TUBE1-207ENST00000604689 CACTIN-AS1Q8N1I8 211 aa8.24□□□□□ -1.09
TUBE1-207ENST00000604689 SUN2Q9UH99 717 aa8.24□□□□□ -1.09
TUBE1-207ENST00000604689 PCDHGC3Q9UN70 934 aa8.24□□□□□ -1.09
TUBE1-207ENST00000604689 TCOF1Q13428 1488 aaKnown RBP8.24□□□□□ -1.09
TUBE1-207ENST00000604689 IL16Q14005 1332 aa8.24□□□□□ -1.09
TUBE1-207ENST00000604689 RLBP1P12271 317 aa8.24□□□□□ -1.09
TUBE1-207ENST00000604689 DMPKQ09013 629 aa8.24□□□□□ -1.09
TUBE1-207ENST00000604689 TRAF1Q13077 416 aa8.24□□□□□ -1.09
TUBE1-207ENST00000604689 AMOTQ4VCS5 1084 aa8.24□□□□□ -1.09
TUBE1-207ENST00000604689 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.24□□□□□ -1.09
TUBE1-207ENST00000604689 C17orf53Q8N3J3 647 aaPredicted RBP8.24□□□□□ -1.09
TUBE1-207ENST00000604689 HPS3Q969F9 1004 aa8.24□□□□□ -1.09
TUBE1-207ENST00000604689 RABEP2Q9H5N1 569 aa8.24□□□□□ -1.09
TUBE1-207ENST00000604689 SEL1LQ9UBV2 794 aa8.24□□□□□ -1.09
TUBE1-207ENST00000604689 TRPC6Q9Y210 931 aa8.24□□□□□ -1.09
TUBE1-207ENST00000604689 BOLA2-SMG1P6H3BVE0 249 aa8.24□□□□□ -1.09
TUBE1-207ENST00000604689 TIMM44O43615 452 aa8.24□□□□□ -1.09
TUBE1-207ENST00000604689 CDKL5O76039 1030 aa8.24□□□□□ -1.09
TUBE1-207ENST00000604689 CD2BP2O95400 341 aaKnown RBP8.24□□□□□ -1.09
TUBE1-207ENST00000604689 NOP2P46087 812 aaKnown RBP8.24□□□□□ -1.09
TUBE1-207ENST00000604689 WASHC5Q12768 1159 aa8.24□□□□□ -1.09
TUBE1-207ENST00000604689 TSGA10IPQ3SY00 556 aa8.24□□□□□ -1.09
TUBE1-207ENST00000604689 SMAD5Q99717 465 aaKnown RBP8.24□□□□□ -1.09
TUBE1-207ENST00000604689 MADDQ8WXG6 1647 aa8.23□□□□□ -1.09
TUBE1-207ENST00000604689 B3GALNT1O75752 331 aa8.23□□□□□ -1.09
TUBE1-207ENST00000604689 CD53P19397 219 aa8.23□□□□□ -1.09
TUBE1-207ENST00000604689 RGL4Q8IZJ4 473 aa8.23□□□□□ -1.09
TUBE1-207ENST00000604689 PTPRHQ9HD43 1115 aa8.23□□□□□ -1.09
TUBE1-207ENST00000604689 FYCO1Q9BQS8 1478 aa8.23□□□□□ -1.09
TUBE1-207ENST00000604689 EPRSP07814 1512 aaKnown RBP8.23□□□□□ -1.09
TUBE1-207ENST00000604689 TTC31Q49AM3 519 aaPredicted RBP8.23□□□□□ -1.09
TUBE1-207ENST00000604689 DALRD3Q5D0E6 543 aaKnown RBP8.23□□□□□ -1.09
TUBE1-207ENST00000604689 OLFML1Q6UWY5 402 aa8.23□□□□□ -1.09
TUBE1-207ENST00000604689 SPATA17Q96L03 361 aa8.23□□□□□ -1.09
TUBE1-207ENST00000604689 ALDH8A1Q9H2A2 487 aaPredicted RBP8.23□□□□□ -1.09
TUBE1-207ENST00000604689 RETREG1Q9H6L5 497 aa8.23□□□□□ -1.09
TUBE1-207ENST00000604689 VEZTQ9HBM0 779 aa8.23□□□□□ -1.09
TUBE1-207ENST00000604689 ZNHIT6Q9NWK9 470 aaKnown RBP8.23□□□□□ -1.09
TUBE1-207ENST00000604689 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.23□□□□□ -1.09
TUBE1-207ENST00000604689 ADGRG1Q9Y653 693 aa8.23□□□□□ -1.09
TUBE1-207ENST00000604689 CCDC196A0A1B0GTZ2 297 aa8.23□□□□□ -1.09
TUBE1-207ENST00000604689 MYBL2P10244 700 aa8.23□□□□□ -1.09
TUBE1-207ENST00000604689 SMARCA1P28370 1054 aa8.23□□□□□ -1.09
TUBE1-207ENST00000604689 DIXDC1Q155Q3 683 aa8.23□□□□□ -1.09
TUBE1-207ENST00000604689 CCDC73Q6ZRK6 1079 aa8.23□□□□□ -1.09
TUBE1-207ENST00000604689 SLF2Q8IX21 1173 aa8.23□□□□□ -1.09
TUBE1-207ENST00000604689 AASDHPPTQ9NRN7 309 aa8.23□□□□□ -1.09
TUBE1-207ENST00000604689 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.23□□□□□ -1.09
TUBE1-207ENST00000604689 CFAP99D6REC4 459 aa8.22□□□□□ -1.09
TUBE1-207ENST00000604689 FGRP09769 529 aa8.22□□□□□ -1.09
TUBE1-207ENST00000604689 RANBP1P43487 201 aa8.22□□□□□ -1.09
TUBE1-207ENST00000604689 KCTD2Q14681 263 aa8.22□□□□□ -1.09
TUBE1-207ENST00000604689 TKFCQ3LXA3 575 aa8.22□□□□□ -1.09
TUBE1-207ENST00000604689 AGAP9Q5VTM2 703 aa8.22□□□□□ -1.09
TUBE1-207ENST00000604689 MCM10Q7L590 875 aa8.22□□□□□ -1.09
TUBE1-207ENST00000604689 MKL1Q969V6 931 aa8.22□□□□□ -1.09
TUBE1-207ENST00000604689 LMTK2Q8IWU2 1503 aa8.22□□□□□ -1.09
TUBE1-207ENST00000604689 RAD54L2Q9Y4B4 1467 aa8.22□□□□□ -1.09
TUBE1-207ENST00000604689 GOLGA6L19H0YKK7 550 aa8.22□□□□□ -1.09
TUBE1-207ENST00000604689 KIF4BQ2VIQ3 1234 aa8.22□□□□□ -1.09
TUBE1-207ENST00000604689 CFAP58Q5T655 872 aa8.22□□□□□ -1.09
TUBE1-207ENST00000604689 KSR2Q6VAB6 950 aa8.22□□□□□ -1.09
TUBE1-207ENST00000604689 FBXL5Q9UKA1 691 aa8.22□□□□□ -1.09
TUBE1-207ENST00000604689 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.22□□□□□ -1.09
TUBE1-207ENST00000604689 TPM1P09493 284 aa8.22□□□□□ -1.09
TUBE1-207ENST00000604689 PEX19P40855 299 aa8.22□□□□□ -1.09
TUBE1-207ENST00000604689 OCLNQ16625 522 aa8.22□□□□□ -1.09
TUBE1-207ENST00000604689 CAVIN1Q6NZI2 390 aaKnown RBP8.22□□□□□ -1.09
TUBE1-207ENST00000604689 FAM114A1Q8IWE2 563 aa8.22□□□□□ -1.09
TUBE1-207ENST00000604689 CTNNBL1Q8WYA6 563 aaPredicted RBP8.22□□□□□ -1.09
TUBE1-207ENST00000604689 SLC39A3Q9BRY0 314 aa8.22□□□□□ -1.09
TUBE1-207ENST00000604689 SPATS2LQ9NUQ6 558 aaKnown RBP8.22□□□□□ -1.09
TUBE1-207ENST00000604689 KIDINS220Q9ULH0 1771 aa8.22□□□□□ -1.09
TUBE1-207ENST00000604689 ESYT3A0FGR9 886 aa8.21□□□□□ -1.09
TUBE1-207ENST00000604689 VIMP08670 466 aaKnown RBP8.21□□□□□ -1.09
TUBE1-207ENST00000604689 U2AF2P26368 475 aaKnown RBP eCLIP8.21□□□□□ -1.091e-7■■■■■ 29.4
TUBE1-207ENST00000604689 GJA8P48165 433 aa8.21□□□□□ -1.09
TUBE1-207ENST00000604689 SLC43A3Q8NBI5 491 aa8.21□□□□□ -1.09
TUBE1-207ENST00000604689 AK9Q5TCS8 1911 aa8.21□□□□□ -1.09
TUBE1-207ENST00000604689 CASKIN1Q8WXD9 1431 aa8.21□□□□□ -1.1
TUBE1-207ENST00000604689 XRCC5P13010 732 aaKnown RBP8.21□□□□□ -1.1
TUBE1-207ENST00000604689 GNAT2P19087 354 aa8.21□□□□□ -1.1
TUBE1-207ENST00000604689 MATR3P43243 847 aaKnown RBP eCLIP8.21□□□□□ -1.1
TUBE1-207ENST00000604689 SLFN5Q08AF3 891 aa8.21□□□□□ -1.1
TUBE1-207ENST00000604689 PPP2R5CQ13362 524 aa8.21□□□□□ -1.1
TUBE1-207ENST00000604689 RASA3Q14644 834 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms