RNA–Protein interactions for RNA: ENST00000603651.1

TUBE1-205, Transcript of tubulin epsilon 1, humanhuman

TSL 3

Gene TUBE1, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-205ENST00000603651 IGHA2P01877 340 aa9.67□□□□□ -0.86
TUBE1-205ENST00000603651 CTSBP07858 339 aa9.67□□□□□ -0.86
TUBE1-205ENST00000603651 MAP4P27816 1152 aaKnown RBP9.67□□□□□ -0.86
TUBE1-205ENST00000603651 PI16Q6UXB8 463 aa9.67□□□□□ -0.86
TUBE1-205ENST00000603651 SMG8Q8ND04 991 aaKnown RBP9.67□□□□□ -0.86
TUBE1-205ENST00000603651 RAD18Q9NS91 495 aa9.67□□□□□ -0.86
TUBE1-205ENST00000603651 IVNS1ABPQ9Y6Y0 642 aa9.67□□□□□ -0.86
TUBE1-205ENST00000603651 ECEL1O95672 775 aa9.66□□□□□ -0.86
TUBE1-205ENST00000603651 CYP11A1P05108 521 aa9.66□□□□□ -0.86
TUBE1-205ENST00000603651 AKAP4Q5JQC9 854 aa9.66□□□□□ -0.86
TUBE1-205ENST00000603651 RNF43Q68DV7 783 aa9.66□□□□□ -0.86
TUBE1-205ENST00000603651 FBLIM1Q8WUP2 373 aa9.66□□□□□ -0.86
TUBE1-205ENST00000603651 MFSD14AQ96MC6 490 aa9.66□□□□□ -0.86
TUBE1-205ENST00000603651 FAM83CQ9BQN1 747 aa9.66□□□□□ -0.86
TUBE1-205ENST00000603651 CORO1BQ9BR76 489 aa9.66□□□□□ -0.86
TUBE1-205ENST00000603651 ABCB6Q9NP58 842 aa9.66□□□□□ -0.86
TUBE1-205ENST00000603651 TMEM238LA0A1B0GVL6 79 aa9.65□□□□□ -0.86
TUBE1-205ENST00000603651 FCGRTP55899 365 aa9.65□□□□□ -0.86
TUBE1-205ENST00000603651 GRM2Q14416 872 aa9.65□□□□□ -0.86
TUBE1-205ENST00000603651 PDE3AQ14432 1141 aa9.65□□□□□ -0.86
TUBE1-205ENST00000603651 NFKBIBQ15653 356 aa9.65□□□□□ -0.86
TUBE1-205ENST00000603651 FBXL6Q8N531 539 aa9.65□□□□□ -0.86
TUBE1-205ENST00000603651 DDX54Q8TDD1 881 aaKnown RBP9.65□□□□□ -0.86
TUBE1-205ENST00000603651 DBNDD2Q9BQY9 259 aa9.65□□□□□ -0.86
TUBE1-205ENST00000603651 NLRP2Q9NX02 1062 aa9.65□□□□□ -0.86
TUBE1-205ENST00000603651 WDR64B1ANS9 1081 aa9.64□□□□□ -0.87
TUBE1-205ENST00000603651 SHKBP1Q8TBC3 707 aa9.64□□□□□ -0.87
TUBE1-205ENST00000603651 ZC3H12CQ9C0D7 883 aaKnown RBP9.64□□□□□ -0.87
TUBE1-205ENST00000603651 TRAK1Q9UPV9 953 aa9.64□□□□□ -0.87
TUBE1-205ENST00000603651 HIF3AQ9Y2N7 669 aa9.64□□□□□ -0.87
TUBE1-205ENST00000603651 PNMA6FA0A0J9YX94 578 aa9.63□□□□□ -0.87
TUBE1-205ENST00000603651 TIAF1O95411 115 aa9.63□□□□□ -0.87
TUBE1-205ENST00000603651 B3GALT4O96024 378 aa9.63□□□□□ -0.87
TUBE1-205ENST00000603651 ITPKAP23677 461 aa9.63□□□□□ -0.87
TUBE1-205ENST00000603651 PLCB3Q01970 1234 aa9.63□□□□□ -0.87
TUBE1-205ENST00000603651 SOX4Q06945 474 aaPredicted RBP9.63□□□□□ -0.87
TUBE1-205ENST00000603651 CDPF1Q6NVV7 123 aa9.63□□□□□ -0.87
TUBE1-205ENST00000603651 DTHD1Q6ZMT9 781 aa9.63□□□□□ -0.87
TUBE1-205ENST00000603651 DYMQ7RTS9 669 aa9.63□□□□□ -0.87
TUBE1-205ENST00000603651 SLC51AQ86UW1 340 aa9.63□□□□□ -0.87
TUBE1-205ENST00000603651 ALKBH8Q96BT7 664 aaKnown RBP9.63□□□□□ -0.87
TUBE1-205ENST00000603651 TRIM56Q9BRZ2 755 aaKnown RBP9.63□□□□□ -0.87
TUBE1-205ENST00000603651 NRSN2Q9GZP1 204 aa9.63□□□□□ -0.87
TUBE1-205ENST00000603651 SUGCTQ9HAC7 445 aa9.63□□□□□ -0.87
TUBE1-205ENST00000603651 AP4E1Q9UPM8 1137 aa9.63□□□□□ -0.87
TUBE1-205ENST00000603651 RAB6AP20340 208 aa9.62□□□□□ -0.87
TUBE1-205ENST00000603651 ZDHHC13Q8IUH4 622 aa9.62□□□□□ -0.87
TUBE1-205ENST00000603651 C2CD4AQ8NCU7 369 aaPredicted RBP9.62□□□□□ -0.87
TUBE1-205ENST00000603651 GPN3Q9UHW5 284 aaPredicted RBP9.62□□□□□ -0.87
TUBE1-205ENST00000603651 FAM95CA0A1B0GW59 222 aa9.61□□□□□ -0.87
TUBE1-205ENST00000603651 EIF4EBP3O60516 100 aaPredicted RBP9.61□□□□□ -0.87
TUBE1-205ENST00000603651 COBLO75128 1261 aa9.61□□□□□ -0.87
TUBE1-205ENST00000603651 MED26O95402 600 aa9.61□□□□□ -0.87
TUBE1-205ENST00000603651 ADH5P11766 374 aa9.61□□□□□ -0.87
TUBE1-205ENST00000603651 MAPK8P45983 427 aa9.61□□□□□ -0.87
TUBE1-205ENST00000603651 PRPF40BQ6NWY9 871 aaKnown RBP9.61□□□□□ -0.87
TUBE1-205ENST00000603651 PPP4R2Q9NY27 417 aa9.61□□□□□ -0.87
TUBE1-205ENST00000603651 FAAP100Q0VG06 881 aa9.6□□□□□ -0.87
TUBE1-205ENST00000603651 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.6□□□□□ -0.87
TUBE1-205ENST00000603651 HP1BP3Q5SSJ5 553 aaPredicted RBP9.6□□□□□ -0.87
TUBE1-205ENST00000603651 PAOXQ6QHF9 649 aa9.6□□□□□ -0.87
TUBE1-205ENST00000603651 GLIS3Q8NEA6 775 aa9.6□□□□□ -0.87
TUBE1-205ENST00000603651 BCO2Q9BYV7 579 aa9.6□□□□□ -0.87
TUBE1-205ENST00000603651 AKAP2Q9Y2D5 859 aa9.6□□□□□ -0.87
TUBE1-205ENST00000603651 YIPF2Q9BWQ6 316 aa9.59□□□□□ -0.87
TUBE1-205ENST00000603651 ZFYVE1Q9HBF4 777 aa9.59□□□□□ -0.87
TUBE1-205ENST00000603651 LGR6Q9HBX8 967 aa9.59□□□□□ -0.87
TUBE1-205ENST00000603651 ATG3Q9NT62 314 aa9.59□□□□□ -0.87
TUBE1-205ENST00000603651 ACTL7BQ9Y614 415 aa9.59□□□□□ -0.87
TUBE1-205ENST00000603651 LIG1P18858 919 aa9.58□□□□□ -0.88
TUBE1-205ENST00000603651 GRIK1P39086 918 aa9.58□□□□□ -0.88
TUBE1-205ENST00000603651 NXPE4Q6UWF7 544 aa9.58□□□□□ -0.88
TUBE1-205ENST00000603651 TREHO43280 583 aa9.57□□□□□ -0.88
TUBE1-205ENST00000603651 CD97P48960 835 aa9.57□□□□□ -0.88
TUBE1-205ENST00000603651 PTPN12Q05209 780 aaKnown RBP9.57□□□□□ -0.88
TUBE1-205ENST00000603651 AP3B2Q13367 1082 aa9.57□□□□□ -0.88
TUBE1-205ENST00000603651 DSC3Q14574 896 aa9.57□□□□□ -0.88
TUBE1-205ENST00000603651 SHISA5Q8N114 240 aa9.57□□□□□ -0.88
TUBE1-205ENST00000603651 SETDB2Q96T68 719 aa9.57□□□□□ -0.88
TUBE1-205ENST00000603651 OSBPL1AQ9BXW6 950 aa9.57□□□□□ -0.88
TUBE1-205ENST00000603651 PRR19A6NJB7 356 aa9.56□□□□□ -0.88
TUBE1-205ENST00000603651 F13BP05160 661 aa9.56□□□□□ -0.88
TUBE1-205ENST00000603651 NFICP08651 508 aa9.56□□□□□ -0.88
TUBE1-205ENST00000603651 ASPAP45381 313 aa9.56□□□□□ -0.88
TUBE1-205ENST00000603651 KCNA1Q09470 495 aa9.56□□□□□ -0.88
TUBE1-205ENST00000603651 ZSCAN29Q8IWY8 852 aaPredicted RBP9.56□□□□□ -0.88
TUBE1-205ENST00000603651 GIMAP7Q8NHV1 300 aa9.56□□□□□ -0.88
TUBE1-205ENST00000603651 TBC1D32Q96NH3 1257 aa9.56□□□□□ -0.88
TUBE1-205ENST00000603651 AOC2O75106 756 aa9.55□□□□□ -0.88
TUBE1-205ENST00000603651 ENOX2Q16206 610 aaKnown RBP9.55□□□□□ -0.88
TUBE1-205ENST00000603651 RPS26P11Q5JNZ5 115 aaPredicted RBP9.55□□□□□ -0.88
TUBE1-205ENST00000603651 KCNB2Q92953 911 aa9.55□□□□□ -0.88
TUBE1-205ENST00000603651 WDR18Q9BV38 432 aa9.55□□□□□ -0.88
TUBE1-205ENST00000603651 CCDC86Q9H6F5 360 aaKnown RBP9.55□□□□□ -0.88
TUBE1-205ENST00000603651 FAM105AQ9NUU6 356 aa9.55□□□□□ -0.88
TUBE1-205ENST00000603651 LEMD3Q9Y2U8 911 aa9.55□□□□□ -0.88
TUBE1-205ENST00000603651 HOXA10P31260 410 aaPredicted RBP9.54□□□□□ -0.88
TUBE1-205ENST00000603651 PPP2R3AQ06190 1150 aa9.54□□□□□ -0.88
TUBE1-205ENST00000603651 WDR89Q96FK6 387 aaPredicted RBP9.54□□□□□ -0.88
TUBE1-205ENST00000603651 WWC3Q9ULE0 1092 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms