RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 SMC2O95347 1197 aa15.34■□□□□ 0.05
VRK3-209ENST00000594948 CABP4P57796 275 aa15.34■□□□□ 0.05
VRK3-209ENST00000594948 ELF2Q15723 593 aa15.34■□□□□ 0.05
VRK3-209ENST00000594948 FBXO38Q6PIJ6 1188 aa15.34■□□□□ 0.05
VRK3-209ENST00000594948 APPBP2Q92624 585 aa15.34■□□□□ 0.05
VRK3-209ENST00000594948 AKAP2Q9Y2D5 859 aa15.34■□□□□ 0.05
VRK3-209ENST00000594948 KCPQ6ZWJ8 1503 aa15.34■□□□□ 0.05
VRK3-209ENST00000594948 A0A087WWV3 80 aa15.33■□□□□ 0.05
VRK3-209ENST00000594948 KLF18A0A0U1RQI7 1052 aa15.33■□□□□ 0.05
VRK3-209ENST00000594948 GOLGA8BA8MQT2 603 aa15.33■□□□□ 0.05
VRK3-209ENST00000594948 PFKFB1P16118 471 aa15.33■□□□□ 0.05
VRK3-209ENST00000594948 SLC39A14Q15043 492 aa15.33■□□□□ 0.05
VRK3-209ENST00000594948 CCDC158Q5M9N0 1113 aa15.33■□□□□ 0.05
VRK3-209ENST00000594948 TTLL5Q6EMB2 1281 aa15.33■□□□□ 0.05
VRK3-209ENST00000594948 ELOA2Q8IYF1 753 aaPredicted RBP15.33■□□□□ 0.05
VRK3-209ENST00000594948 SRRTQ9BXP5 876 aaKnown RBP15.33■□□□□ 0.05
VRK3-209ENST00000594948 NBPF26B4DH59 902 aa15.33■□□□□ 0.04
VRK3-209ENST00000594948 FOXP2O15409 715 aa15.33■□□□□ 0.04
VRK3-209ENST00000594948 ZC3H6P61129 1189 aaKnown RBP15.33■□□□□ 0.04
VRK3-209ENST00000594948 FANCCQ00597 558 aa15.33■□□□□ 0.04
VRK3-209ENST00000594948 TERF2Q15554 542 aa15.33■□□□□ 0.04
VRK3-209ENST00000594948 LRRC24Q50LG9 513 aa15.33■□□□□ 0.04
VRK3-209ENST00000594948 NBPF14Q5TI25 921 aa15.33■□□□□ 0.04
VRK3-209ENST00000594948 NBPF10Q6P3W6 841 aaKnown RBP15.33■□□□□ 0.04
VRK3-209ENST00000594948 ZNF771Q7L3S4 317 aaPredicted RBP15.33■□□□□ 0.04
VRK3-209ENST00000594948 CHST3Q7LGC8 479 aa15.33■□□□□ 0.04
VRK3-209ENST00000594948 NBPF15Q8N660 670 aa15.33■□□□□ 0.04
VRK3-209ENST00000594948 JMYQ8N9B5 988 aa15.33■□□□□ 0.04
VRK3-209ENST00000594948 CEP126Q9P2H0 1117 aa15.33■□□□□ 0.04
VRK3-209ENST00000594948 HPSEQ9Y251 543 aa15.33■□□□□ 0.04
VRK3-209ENST00000594948 ATRNO75882 1429 aa15.33■□□□□ 0.04
VRK3-209ENST00000594948 CPLX1O14810 134 aa15.32■□□□□ 0.04
VRK3-209ENST00000594948 CDKL5O76039 1030 aa15.32■□□□□ 0.04
VRK3-209ENST00000594948 PIP4K2AP48426 406 aaPredicted RBP15.32■□□□□ 0.04
VRK3-209ENST00000594948 BMS1Q14692 1282 aaKnown RBP15.32■□□□□ 0.04
VRK3-209ENST00000594948 MAP3K15Q6ZN16 1313 aa15.32■□□□□ 0.04
VRK3-209ENST00000594948 TMX1Q9H3N1 280 aa15.32■□□□□ 0.04
VRK3-209ENST00000594948 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.32■□□□□ 0.04
VRK3-209ENST00000594948 ZMYM6O95789 1325 aa15.31■□□□□ 0.04
VRK3-209ENST00000594948 FGAP02671 866 aa15.31■□□□□ 0.04
VRK3-209ENST00000594948 ANTXR2P58335 489 aa15.31■□□□□ 0.04
VRK3-209ENST00000594948 ETF1P62495 437 aaKnown RBP15.31■□□□□ 0.04
VRK3-209ENST00000594948 TTC39AQ5SRH9 613 aa15.31■□□□□ 0.04
VRK3-209ENST00000594948 RALYLQ86SE5 291 aaKnown RBP15.31■□□□□ 0.04
VRK3-209ENST00000594948 ERCC4Q92889 916 aaPredicted RBP15.31■□□□□ 0.04
VRK3-209ENST00000594948 MYH3P11055 1940 aa15.31■□□□□ 0.04
VRK3-209ENST00000594948 POLR3DP05423 398 aaPredicted RBP15.31■□□□□ 0.04
VRK3-209ENST00000594948 MYL5Q02045 173 aa15.31■□□□□ 0.04
VRK3-209ENST00000594948 SYT10Q6XYQ8 523 aa15.31■□□□□ 0.04
VRK3-209ENST00000594948 CCDC9Q9Y3X0 531 aaKnown RBP15.31■□□□□ 0.04
VRK3-209ENST00000594948 KIF28PB7ZC32 967 aa15.3■□□□□ 0.04
VRK3-209ENST00000594948 ZNF213O14771 459 aa15.3■□□□□ 0.04
VRK3-209ENST00000594948 SYKP43405 635 aa15.3■□□□□ 0.04
VRK3-209ENST00000594948 OTUD7BQ6GQQ9 843 aa15.3■□□□□ 0.04
VRK3-209ENST00000594948 HSD3B7Q9H2F3 369 aa15.3■□□□□ 0.04
VRK3-209ENST00000594948 GPHNQ9NQX3 736 aaPredicted RBP15.3■□□□□ 0.04
VRK3-209ENST00000594948 MROH7-TTC4A0A0A0MT08 1334 aa15.29■□□□□ 0.04
VRK3-209ENST00000594948 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.29■□□□□ 0.04
VRK3-209ENST00000594948 TPM1P09493 284 aa15.29■□□□□ 0.04
VRK3-209ENST00000594948 WASHC4Q2M389 1173 aa15.29■□□□□ 0.04
VRK3-209ENST00000594948 TTLL7Q6ZT98 887 aa15.29■□□□□ 0.04
VRK3-209ENST00000594948 ISCA1Q9BUE6 129 aa15.29■□□□□ 0.04
VRK3-209ENST00000594948 ARAP2Q8WZ64 1704 aa15.29■□□□□ 0.04
VRK3-209ENST00000594948 ATP8B1O43520 1251 aa15.29■□□□□ 0.04
VRK3-209ENST00000594948 CUTAO60888 179 aa15.29■□□□□ 0.04
VRK3-209ENST00000594948 WDHD1O75717 1129 aaPredicted RBP15.29■□□□□ 0.04
VRK3-209ENST00000594948 CSB-PGBD3P0DP91 1061 aa15.29■□□□□ 0.04
VRK3-209ENST00000594948 PTPAQ15257 358 aa15.29■□□□□ 0.04
VRK3-209ENST00000594948 RESP18Q5W5W9 173 aa15.29■□□□□ 0.04
VRK3-209ENST00000594948 CPLX2Q6PUV4 134 aaKnown RBP15.29■□□□□ 0.04
VRK3-209ENST00000594948 FBXW7Q969H0 707 aa15.29■□□□□ 0.04
VRK3-209ENST00000594948 XAGE2Q96GT9 111 aa15.29■□□□□ 0.04
VRK3-209ENST00000594948 ZNF594Q96JF6 807 aaPredicted RBP15.29■□□□□ 0.04
VRK3-209ENST00000594948 ZNF512BQ96KM6 892 aaPredicted RBP15.29■□□□□ 0.04
VRK3-209ENST00000594948 PLA2G12BQ9BX93 195 aa15.29■□□□□ 0.04
VRK3-209ENST00000594948 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.29■□□□□ 0.04
VRK3-209ENST00000594948 ZNF446Q9NWS9 450 aa15.29■□□□□ 0.04
VRK3-209ENST00000594948 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.29■□□□□ 0.04
VRK3-209ENST00000594948 V9GYY5 206 aaPredicted RBP15.29■□□□□ 0.04
VRK3-209ENST00000594948 DCCP43146 1447 aa15.28■□□□□ 0.04
VRK3-209ENST00000594948 TNS2Q63HR2 1409 aa15.28■□□□□ 0.04
VRK3-209ENST00000594948 ANKRD36CQ5JPF3 1778 aa15.28■□□□□ 0.04
VRK3-209ENST00000594948 TIAM2Q8IVF5 1701 aa15.28■□□□□ 0.04
VRK3-209ENST00000594948 SHANK3Q9BYB0 1731 aa15.28■□□□□ 0.04
VRK3-209ENST00000594948 GOLGA6L9A6NEM1 432 aa15.28■□□□□ 0.04
VRK3-209ENST00000594948 ERVV-2B6SEH9 535 aa15.28■□□□□ 0.04
VRK3-209ENST00000594948 ZSCAN12O43309 604 aa15.28■□□□□ 0.04
VRK3-209ENST00000594948 UBASH3AP57075 661 aa15.28■□□□□ 0.04
VRK3-209ENST00000594948 FKBP4Q02790 459 aaKnown RBP eCLIP15.28■□□□□ 0.04
VRK3-209ENST00000594948 TRIM28Q13263 835 aaKnown RBP15.28■□□□□ 0.04
VRK3-209ENST00000594948 CCDC57Q2TAC2 916 aa15.28■□□□□ 0.04
VRK3-209ENST00000594948 GORABQ5T7V8 394 aa15.28■□□□□ 0.04
VRK3-209ENST00000594948 VSTM4Q8IW00 320 aa15.28■□□□□ 0.04
VRK3-209ENST00000594948 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.28■□□□□ 0.042e-7■■■□□ 18.9
VRK3-209ENST00000594948 ARGLU1Q9NWB6 273 aaPredicted RBP15.28■□□□□ 0.04
VRK3-209ENST00000594948 ANGEL1Q9UNK9 670 aaKnown RBP15.28■□□□□ 0.04
VRK3-209ENST00000594948 MYO5AQ9Y4I1 1855 aaKnown RBP15.28■□□□□ 0.04
VRK3-209ENST00000594948 LRP6O75581 1613 aa15.28■□□□□ 0.04
VRK3-209ENST00000594948 DOCK2Q92608 1830 aa15.28■□□□□ 0.04
VRK3-209ENST00000594948 STK36Q9NRP7 1315 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms