RNA–Protein interactions for RNA: ENST00000593098.5

PIK3C3-215, Transcript of phosphatidylinositol 3-kinase catalytic subunit type 3, human

TSL 2

Gene PIK3C3, Length 3,634 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PIK3C3-215	ENST00000593098	MAPT	P10636	758 aa	Known RBP	3.1	□□□□□ -1.91
PIK3C3-215	ENST00000593098	ZAP70	P43403	619 aa		3.1	□□□□□ -1.91
PIK3C3-215	ENST00000593098	NAA30	Q147X3	362 aa	Predicted RBP	3.1	□□□□□ -1.91
PIK3C3-215	ENST00000593098	FRMD6	Q96NE9	622 aa		3.1	□□□□□ -1.91
PIK3C3-215	ENST00000593098	OSBPL7	Q9BZF2	842 aa		3.1	□□□□□ -1.91
PIK3C3-215	ENST00000593098	TUT1	Q9H6E5	874 aa	Known RBP	3.1	□□□□□ -1.91
PIK3C3-215	ENST00000593098	ARFGEF2	Q9Y6D5	1785 aa		3.1	□□□□□ -1.91
PIK3C3-215	ENST00000593098	ARAF	P10398	606 aa		3.1	□□□□□ -1.91
PIK3C3-215	ENST00000593098	C8orf37	Q96NL8	207 aa		3.1	□□□□□ -1.91
PIK3C3-215	ENST00000593098	NLRP3	Q96P20	1036 aa		3.1	□□□□□ -1.91
PIK3C3-215	ENST00000593098	FRRS1L	Q9P0K9	344 aa		3.1	□□□□□ -1.91
PIK3C3-215	ENST00000593098	CCDC141	Q6ZP82	1450 aa		3.1	□□□□□ -1.91
PIK3C3-215	ENST00000593098	ADAMTSL1	Q8N6G6	1762 aa		3.09	□□□□□ -1.91
PIK3C3-215	ENST00000593098	PRPF40A	O75400	957 aa	Known RBP	3.09	□□□□□ -1.91
PIK3C3-215	ENST00000593098	ARSD	P51689	593 aa		3.09	□□□□□ -1.91
PIK3C3-215	ENST00000593098	SFSWAP	Q12872	951 aa	Known RBP	3.09	□□□□□ -1.91
PIK3C3-215	ENST00000593098	SCARA3	Q6AZY7	606 aa		3.09	□□□□□ -1.91
PIK3C3-215	ENST00000593098	HSH2D	Q96JZ2	352 aa		3.09	□□□□□ -1.91
PIK3C3-215	ENST00000593098	SRA1	Q9HD15	236 aa	Known RBP	3.09	□□□□□ -1.91
PIK3C3-215	ENST00000593098	NXF1	Q9UBU9	619 aa	Known RBP	3.09	□□□□□ -1.91
PIK3C3-215	ENST00000593098	PXDNL	A1KZ92	1463 aa		3.09	□□□□□ -1.91
PIK3C3-215	ENST00000593098	ITSN1	Q15811	1721 aa		3.09	□□□□□ -1.92
PIK3C3-215	ENST00000593098	LGR5	O75473	907 aa		3.09	□□□□□ -1.92
PIK3C3-215	ENST00000593098	CAPNS1	P04632	268 aa		3.09	□□□□□ -1.92
PIK3C3-215	ENST00000593098	ALKBH2	Q6NS38	261 aa		3.09	□□□□□ -1.92
PIK3C3-215	ENST00000593098	GSX1	Q9H4S2	264 aa	Predicted RBP	3.09	□□□□□ -1.92
PIK3C3-215	ENST00000593098	TIMMDC1	Q9NPL8	285 aa		3.09	□□□□□ -1.92
PIK3C3-215	ENST00000593098	AK5	Q9Y6K8	562 aa		3.09	□□□□□ -1.92
PIK3C3-215	ENST00000593098	CLTCL1	P53675	1640 aa		3.09	□□□□□ -1.92
PIK3C3-215	ENST00000593098	SOBP	A7XYQ1	873 aa		3.08	□□□□□ -1.92
PIK3C3-215	ENST00000593098	MEN1	O00255	615 aa		3.08	□□□□□ -1.92
PIK3C3-215	ENST00000593098	HIF1A	Q16665	826 aa		3.08	□□□□□ -1.92
PIK3C3-215	ENST00000593098	TMEM102	Q8N9M5	508 aa	Predicted RBP	3.08	□□□□□ -1.92
PIK3C3-215	ENST00000593098	HCN4	Q9Y3Q4	1203 aa		3.08	□□□□□ -1.92
PIK3C3-215	ENST00000593098	PLA2G4A	P47712	749 aa		3.08	□□□□□ -1.92
PIK3C3-215	ENST00000593098	PKDCC	Q504Y2	493 aa		3.08	□□□□□ -1.92
PIK3C3-215	ENST00000593098	ZNF772	Q68DY9	489 aa	Predicted RBP	3.08	□□□□□ -1.92
PIK3C3-215	ENST00000593098	ZNF428	Q96B54	188 aa		3.08	□□□□□ -1.92
PIK3C3-215	ENST00000593098	SLIT3	O75094	1523 aa		3.08	□□□□□ -1.92
PIK3C3-215	ENST00000593098	TERT	O14746	1132 aa	Known RBP	3.08	□□□□□ -1.92
PIK3C3-215	ENST00000593098	USP5	P45974	858 aa		3.08	□□□□□ -1.92
PIK3C3-215	ENST00000593098	IDH3A	P50213	366 aa		3.08	□□□□□ -1.92
PIK3C3-215	ENST00000593098	MARS	P56192	900 aa	Known RBP	3.08	□□□□□ -1.92
PIK3C3-215	ENST00000593098	FANCC	Q00597	558 aa		3.08	□□□□□ -1.92
PIK3C3-215	ENST00000593098	TREML4	Q6UXN2	200 aa		3.08	□□□□□ -1.92
PIK3C3-215	ENST00000593098		Q6ZS46	218 aa		3.08	□□□□□ -1.92
PIK3C3-215	ENST00000593098	NLRP13	Q86W25	1043 aa		3.08	□□□□□ -1.92
PIK3C3-215	ENST00000593098	FCHSD1	Q86WN1	690 aa		3.08	□□□□□ -1.92
PIK3C3-215	ENST00000593098	SOX17	Q9H6I2	414 aa	Predicted RBP	3.08	□□□□□ -1.92
PIK3C3-215	ENST00000593098	ABCB6	Q9NP58	842 aa		3.08	□□□□□ -1.92
PIK3C3-215	ENST00000593098	TLR7	Q9NYK1	1049 aa	Known RBP	3.08	□□□□□ -1.92
PIK3C3-215	ENST00000593098	RGPD8	O14715	1765 aa	Predicted RBP	3.08	□□□□□ -1.92
PIK3C3-215	ENST00000593098	RGPD5	Q99666	1765 aa		3.08	□□□□□ -1.92
PIK3C3-215	ENST00000593098	SYNGAP1	Q96PV0	1343 aa		3.08	□□□□□ -1.92
PIK3C3-215	ENST00000593098	TAF1L	Q8IZX4	1826 aa		3.08	□□□□□ -1.92
PIK3C3-215	ENST00000593098	TMEM2	Q9UHN6	1383 aa		3.08	□□□□□ -1.92
PIK3C3-215	ENST00000593098	TOGARAM1	Q9Y4F4	1720 aa		3.08	□□□□□ -1.92
PIK3C3-215	ENST00000593098	GIPC1	O14908	333 aa		3.07	□□□□□ -1.92
PIK3C3-215	ENST00000593098	USPL1	Q5W0Q7	1092 aa		3.07	□□□□□ -1.92
PIK3C3-215	ENST00000593098	ACD	Q96AP0	544 aa		3.07	□□□□□ -1.92
PIK3C3-215	ENST00000593098	RTCB	Q9Y3I0	505 aa	Known RBP	3.07	□□□□□ -1.92
PIK3C3-215	ENST00000593098	FAM208A	Q9UK61	1670 aa	Known RBP	3.07	□□□□□ -1.92
PIK3C3-215	ENST00000593098	RPLP1	P05386	114 aa	Known RBP	3.07	□□□□□ -1.92
PIK3C3-215	ENST00000593098	RING1	Q06587	406 aa		3.07	□□□□□ -1.92
PIK3C3-215	ENST00000593098	CCDC27	Q2M243	656 aa		3.07	□□□□□ -1.92
PIK3C3-215	ENST00000593098	SLC43A3	Q8NBI5	491 aa		3.07	□□□□□ -1.92
PIK3C3-215	ENST00000593098	METTL5	Q9NRN9	209 aa	Known RBP	3.07	□□□□□ -1.92
PIK3C3-215	ENST00000593098	NAGPA	Q9UK23	515 aa		3.07	□□□□□ -1.92
PIK3C3-215	ENST00000593098	CLIP1	P30622	1438 aa		3.07	□□□□□ -1.92
PIK3C3-215	ENST00000593098	ATP7B	P35670	1465 aa		3.07	□□□□□ -1.92
PIK3C3-215	ENST00000593098	GNAS	Q5JWF2	1037 aa		3.07	□□□□□ -1.92
PIK3C3-215	ENST00000593098	C1orf127	Q8N9H9	656 aa		3.07	□□□□□ -1.92
PIK3C3-215	ENST00000593098	EDEM1	Q92611	657 aa		3.07	□□□□□ -1.92
PIK3C3-215	ENST00000593098	HINFP	Q9BQA5	517 aa		3.07	□□□□□ -1.92
PIK3C3-215	ENST00000593098	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	3.07	□□□□□ -1.92
PIK3C3-215	ENST00000593098	MBIP	Q9NS73	344 aa		3.07	□□□□□ -1.92
PIK3C3-215	ENST00000593098	CABP1	Q9NZU7	370 aa		3.07	□□□□□ -1.92
PIK3C3-215	ENST00000593098	FOXD3	Q9UJU5	478 aa	Predicted RBP	3.07	□□□□□ -1.92
PIK3C3-215	ENST00000593098	YTHDC2	Q9H6S0	1430 aa	Known RBP	3.07	□□□□□ -1.92
PIK3C3-215	ENST00000593098	ZBTB7C	A1YPR0	619 aa		3.06	□□□□□ -1.92
PIK3C3-215	ENST00000593098	UBAP1L	F5GYI3	381 aa		3.06	□□□□□ -1.92
PIK3C3-215	ENST00000593098	ITGB2	P05107	769 aa		3.06	□□□□□ -1.92
PIK3C3-215	ENST00000593098	BMP2	P12643	396 aa		3.06	□□□□□ -1.92
PIK3C3-215	ENST00000593098	GPLD1	P80108	840 aa		3.06	□□□□□ -1.92
PIK3C3-215	ENST00000593098	PDZD3	Q86UT5	571 aa		3.06	□□□□□ -1.92
PIK3C3-215	ENST00000593098	RHPN1	Q8TCX5	695 aa		3.06	□□□□□ -1.92
PIK3C3-215	ENST00000593098	RHOV	Q96L33	236 aa		3.06	□□□□□ -1.92
PIK3C3-215	ENST00000593098	POLM	Q9NP87	494 aa	Predicted RBP	3.06	□□□□□ -1.92
PIK3C3-215	ENST00000593098	SOX13	Q9UN79	622 aa		3.06	□□□□□ -1.92
PIK3C3-215	ENST00000593098	PCDHGC5	Q9Y5F6	944 aa		3.06	□□□□□ -1.92
PIK3C3-215	ENST00000593098	C1orf167	Q5SNV9	1468 aa		3.06	□□□□□ -1.92
PIK3C3-215	ENST00000593098	ATXN7	O15265	892 aa	Predicted RBP	3.06	□□□□□ -1.92
PIK3C3-215	ENST00000593098	NID1	P14543	1247 aa		3.06	□□□□□ -1.92
PIK3C3-215	ENST00000593098	FGFR3	P22607	806 aa		3.06	□□□□□ -1.92
PIK3C3-215	ENST00000593098	NRL	P54845	237 aa		3.06	□□□□□ -1.92
PIK3C3-215	ENST00000593098	CTBS	Q01459	385 aa		3.06	□□□□□ -1.92
PIK3C3-215	ENST00000593098	NBPF1	Q3BBV0	1214 aa		3.06	□□□□□ -1.92
PIK3C3-215	ENST00000593098	RPS26P11	Q5JNZ5	115 aa	Predicted RBP	3.06	□□□□□ -1.92
PIK3C3-215	ENST00000593098	RASIP1	Q5U651	963 aa		3.06	□□□□□ -1.92
PIK3C3-215	ENST00000593098	ZNF385C	Q66K41	422 aa	Predicted RBP	3.06	□□□□□ -1.92

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