RNA–Protein interactions for RNA: ENST00000592619.5

VMP1-215, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-215ENST00000592619 SSBP05455 408 aaKnown RBP eCLIP9.51□□□□□ -0.89
VMP1-215ENST00000592619 ESRRAP11474 423 aaPredicted RBP9.51□□□□□ -0.89
VMP1-215ENST00000592619 APOBRQ0VD83 1088 aa9.51□□□□□ -0.89
VMP1-215ENST00000592619 CCDC144BQ3MJ40 725 aa9.51□□□□□ -0.89
VMP1-215ENST00000592619 NBPF6Q5VWK0 638 aa9.51□□□□□ -0.89
VMP1-215ENST00000592619 NBPF4Q96M43 638 aa9.51□□□□□ -0.89
VMP1-215ENST00000592619 NXF1Q9UBU9 619 aaKnown RBP9.51□□□□□ -0.89
VMP1-215ENST00000592619 TRIM33Q9UPN9 1127 aa9.51□□□□□ -0.89
VMP1-215ENST00000592619 CADPSQ9ULU8 1353 aa9.5□□□□□ -0.89
VMP1-215ENST00000592619 FAM181BA6NEQ2 426 aa9.5□□□□□ -0.89
VMP1-215ENST00000592619 ZNF157P51786 506 aaPredicted RBP9.5□□□□□ -0.89
VMP1-215ENST00000592619 LRRC14Q15048 493 aa9.5□□□□□ -0.89
VMP1-215ENST00000592619 DDX54Q8TDD1 881 aaKnown RBP9.5□□□□□ -0.89
VMP1-215ENST00000592619 GATAD2BQ8WXI9 593 aa9.5□□□□□ -0.89
VMP1-215ENST00000592619 NKD1Q969G9 470 aa9.5□□□□□ -0.89
VMP1-215ENST00000592619 MIR1-1HGQ9H1L0 117 aa9.5□□□□□ -0.89
VMP1-215ENST00000592619 FAM221AA4D161 298 aa9.49□□□□□ -0.89
VMP1-215ENST00000592619 FAM177BA6PVY3 158 aa9.49□□□□□ -0.89
VMP1-215ENST00000592619 NEURL1BA8MQ27 555 aa9.49□□□□□ -0.89
VMP1-215ENST00000592619 SMARCA5O60264 1052 aaPredicted RBP9.49□□□□□ -0.89
VMP1-215ENST00000592619 LMNB1P20700 586 aa9.49□□□□□ -0.89
VMP1-215ENST00000592619 ARNTP27540 789 aa9.49□□□□□ -0.89
VMP1-215ENST00000592619 CDC27P30260 824 aa9.49□□□□□ -0.89
VMP1-215ENST00000592619 CRKP46108 304 aa9.49□□□□□ -0.89
VMP1-215ENST00000592619 RASIP1Q5U651 963 aa9.49□□□□□ -0.89
VMP1-215ENST00000592619 PSAPL1Q6NUJ1 521 aa9.49□□□□□ -0.89
VMP1-215ENST00000592619 GIMAP6Q6P9H5 292 aa9.49□□□□□ -0.89
VMP1-215ENST00000592619 SULF2Q8IWU5 870 aa9.49□□□□□ -0.89
VMP1-215ENST00000592619 CKAP2LQ8IYA6 745 aa9.49□□□□□ -0.89
VMP1-215ENST00000592619 PMFBP1Q8TBY8 1022 aa9.49□□□□□ -0.89
VMP1-215ENST00000592619 EMILIN2Q9BXX0 1053 aa9.49□□□□□ -0.89
VMP1-215ENST00000592619 EIF4EBP3O60516 100 aaPredicted RBP9.48□□□□□ -0.89
VMP1-215ENST00000592619 F13A1P00488 732 aa9.48□□□□□ -0.89
VMP1-215ENST00000592619 ALAS2P22557 587 aa9.48□□□□□ -0.89
VMP1-215ENST00000592619 CABP4P57796 275 aa9.48□□□□□ -0.89
VMP1-215ENST00000592619 IKBKEQ14164 716 aa9.48□□□□□ -0.89
VMP1-215ENST00000592619 SUZ12Q15022 739 aaKnown RBP9.48□□□□□ -0.89
VMP1-215ENST00000592619 GPR161Q8N6U8 529 aaKnown RBP9.48□□□□□ -0.89
VMP1-215ENST00000592619 LACRTQ9GZZ8 138 aa9.48□□□□□ -0.89
VMP1-215ENST00000592619 SOX17Q9H6I2 414 aaPredicted RBP9.48□□□□□ -0.89
VMP1-215ENST00000592619 ZNF408Q9H9D4 720 aa9.48□□□□□ -0.89
VMP1-215ENST00000592619 SH2B1Q9NRF2 756 aaPredicted RBP9.48□□□□□ -0.89
VMP1-215ENST00000592619 GGA1Q9UJY5 639 aa9.48□□□□□ -0.89
VMP1-215ENST00000592619 PCDHB5Q9Y5E4 795 aa9.48□□□□□ -0.89
VMP1-215ENST00000592619 RGS9O75916 674 aaPredicted RBP9.47□□□□□ -0.89
VMP1-215ENST00000592619 ZNF252P-AS1Q0IIN9 211 aa9.47□□□□□ -0.89
VMP1-215ENST00000592619 MPP2Q14168 576 aa9.47□□□□□ -0.89
VMP1-215ENST00000592619 DIEXFQ68CQ4 756 aaKnown RBP9.47□□□□□ -0.89
VMP1-215ENST00000592619 LLGL2Q6P1M3 1020 aa9.47□□□□□ -0.89
VMP1-215ENST00000592619 BNC2Q6ZN30 1099 aaPredicted RBP9.47□□□□□ -0.89
VMP1-215ENST00000592619 GOLGA6L1Q8N7Z2 621 aa9.47□□□□□ -0.89
VMP1-215ENST00000592619 STK35Q8TDR2 534 aa9.47□□□□□ -0.89
VMP1-215ENST00000592619 OSBPL2Q9H1P3 480 aa9.47□□□□□ -0.89
VMP1-215ENST00000592619 GDF2Q9UK05 429 aaPredicted RBP9.47□□□□□ -0.89
VMP1-215ENST00000592619 H3BM21 787 aa9.46□□□□□ -0.9
VMP1-215ENST00000592619 H3BRJ5 948 aa9.46□□□□□ -0.9
VMP1-215ENST00000592619 CILPO75339 1184 aa9.46□□□□□ -0.9
VMP1-215ENST00000592619 VSIG8P0DPA2 414 aa9.46□□□□□ -0.9
VMP1-215ENST00000592619 EPHA1P21709 976 aa9.46□□□□□ -0.9
VMP1-215ENST00000592619 LORP23490 312 aaPredicted RBP9.46□□□□□ -0.9
VMP1-215ENST00000592619 AP3B2Q13367 1082 aa9.46□□□□□ -0.9
VMP1-215ENST00000592619 SLCO4C1Q6ZQN7 724 aa9.46□□□□□ -0.9
VMP1-215ENST00000592619 SOX1O00570 391 aaPredicted RBP9.45□□□□□ -0.9
VMP1-215ENST00000592619 GRIK5Q16478 980 aa9.45□□□□□ -0.9
VMP1-215ENST00000592619 CWF19L2Q2TBE0 894 aaKnown RBP9.45□□□□□ -0.9
VMP1-215ENST00000592619 SEZ6Q53EL9 994 aa9.45□□□□□ -0.9
VMP1-215ENST00000592619 GDF6Q6KF10 455 aaPredicted RBP9.45□□□□□ -0.9
VMP1-215ENST00000592619 C20orf204Q6ZNR8 217 aa9.45□□□□□ -0.9
VMP1-215ENST00000592619 PDZD3Q86UT5 571 aa9.45□□□□□ -0.9
VMP1-215ENST00000592619 ZSWIM4Q9H7M6 989 aa9.45□□□□□ -0.9
VMP1-215ENST00000592619 IGF1RP08069 1367 aa9.45□□□□□ -0.9
VMP1-215ENST00000592619 ETFBP38117 255 aa9.44□□□□□ -0.9
VMP1-215ENST00000592619 REXO1Q8N1G1 1221 aaKnown RBP9.44□□□□□ -0.9
VMP1-215ENST00000592619 FBXO27Q8NI29 283 aa9.44□□□□□ -0.9
VMP1-215ENST00000592619 GRIN3AQ8TCU5 1115 aa9.44□□□□□ -0.9
VMP1-215ENST00000592619 CPLX3Q8WVH0 158 aa9.44□□□□□ -0.9
VMP1-215ENST00000592619 JARID2Q92833 1246 aaPredicted RBP9.44□□□□□ -0.9
VMP1-215ENST00000592619 WNT8BQ93098 351 aa9.44□□□□□ -0.9
VMP1-215ENST00000592619 SRRTQ9BXP5 876 aaKnown RBP9.44□□□□□ -0.9
VMP1-215ENST00000592619 CACNA2D2Q9NY47 1150 aa9.44□□□□□ -0.9
VMP1-215ENST00000592619 STARD13Q9Y3M8 1113 aa9.44□□□□□ -0.9
VMP1-215ENST00000592619 TRIM37O94972 964 aa9.43□□□□□ -0.9
VMP1-215ENST00000592619 SERINC3Q13530 473 aa9.43□□□□□ -0.9
VMP1-215ENST00000592619 SEPT6Q14141 434 aa9.43□□□□□ -0.9
VMP1-215ENST00000592619 KANK3Q6NY19 840 aa9.43□□□□□ -0.9
VMP1-215ENST00000592619 REC114Q7Z4M0 266 aa9.43□□□□□ -0.9
VMP1-215ENST00000592619 ZSCAN1Q8NBB4 408 aa9.43□□□□□ -0.9
VMP1-215ENST00000592619 MKL1Q969V6 931 aa9.43□□□□□ -0.9
VMP1-215ENST00000592619 GAL3ST3Q96A11 431 aa9.43□□□□□ -0.9
VMP1-215ENST00000592619 SHDQ96IW2 340 aa9.43□□□□□ -0.9
VMP1-215ENST00000592619 PIF1Q9H611 641 aa9.43□□□□□ -0.9
VMP1-215ENST00000592619 CBX8Q9HC52 389 aa9.43□□□□□ -0.9
VMP1-215ENST00000592619 PPME1Q9Y570 386 aa9.43□□□□□ -0.9
VMP1-215ENST00000592619 TLDC2A0PJX2 215 aa9.42□□□□□ -0.9
VMP1-215ENST00000592619 KLF4O43474 513 aa9.42□□□□□ -0.9
VMP1-215ENST00000592619 EPXP11678 715 aa9.42□□□□□ -0.9
VMP1-215ENST00000592619 BAG6P46379 1132 aa9.42□□□□□ -0.9
VMP1-215ENST00000592619 ZNF165P49910 485 aa9.42□□□□□ -0.9
VMP1-215ENST00000592619 PIP4K2BP78356 416 aa9.42□□□□□ -0.9
VMP1-215ENST00000592619 SRSF11Q05519 484 aaKnown RBP9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms