RNA–Protein interactions for RNA: ENST00000591547.5

RETREG3-211, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-211ENST00000591547 C15orf52Q6ZUT6 534 aaKnown RBP12.53□□□□□ -0.4
RETREG3-211ENST00000591547 ZNF804AQ7Z570 1209 aa12.53□□□□□ -0.4
RETREG3-211ENST00000591547 ZFYVE28Q9HCC9 887 aa12.53□□□□□ -0.4
RETREG3-211ENST00000591547 GYG1P46976 350 aa12.52□□□□□ -0.41
RETREG3-211ENST00000591547 MAP3K9P80192 1104 aa12.52□□□□□ -0.41
RETREG3-211ENST00000591547 CALD1Q05682 793 aaKnown RBP12.52□□□□□ -0.41
RETREG3-211ENST00000591547 TWISTNBQ3B726 338 aaPredicted RBP12.52□□□□□ -0.41
RETREG3-211ENST00000591547 NBPF11Q86T75 865 aa12.52□□□□□ -0.41
RETREG3-211ENST00000591547 SHISA4Q96DD7 197 aa12.52□□□□□ -0.41
RETREG3-211ENST00000591547 RBM27Q9P2N5 1060 aaKnown RBP12.52□□□□□ -0.41
RETREG3-211ENST00000591547 TTF2Q9UNY4 1162 aaKnown RBP12.52□□□□□ -0.41
RETREG3-211ENST00000591547 TRIOBPQ9H2D6 2365 aa12.52□□□□□ -0.41
RETREG3-211ENST00000591547 CEP290O15078 2479 aa12.51□□□□□ -0.41
RETREG3-211ENST00000591547 F6X3S4 739 aa12.51□□□□□ -0.41
RETREG3-211ENST00000591547 FKBP1AP62942 108 aaKnown RBP12.51□□□□□ -0.41
RETREG3-211ENST00000591547 FLIIQ13045 1269 aa12.51□□□□□ -0.41
RETREG3-211ENST00000591547 IFIT5Q13325 482 aaKnown RBP12.51□□□□□ -0.41
RETREG3-211ENST00000591547 FKBP5Q13451 457 aaPredicted RBP12.51□□□□□ -0.41
RETREG3-211ENST00000591547 MFSD14BQ5SR56 506 aa12.51□□□□□ -0.41
RETREG3-211ENST00000591547 LMBR1LQ6UX01 489 aa12.51□□□□□ -0.41
RETREG3-211ENST00000591547 DZIP1LQ8IYY4 767 aaKnown RBP12.51□□□□□ -0.41
RETREG3-211ENST00000591547 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.51□□□□□ -0.41
RETREG3-211ENST00000591547 DNAAF4Q8WXU2 420 aa12.51□□□□□ -0.41
RETREG3-211ENST00000591547 ZKSCAN4Q969J2 545 aaPredicted RBP12.51□□□□□ -0.41
RETREG3-211ENST00000591547 IQSEC3Q9UPP2 1182 aaPredicted RBP12.51□□□□□ -0.41
RETREG3-211ENST00000591547 BTBD19C9JJ37 291 aa12.5□□□□□ -0.41
RETREG3-211ENST00000591547 CRKP46108 304 aa12.5□□□□□ -0.41
RETREG3-211ENST00000591547 GTF2A2P52657 109 aa12.5□□□□□ -0.41
RETREG3-211ENST00000591547 LACTBP83111 547 aaPredicted RBP12.5□□□□□ -0.41
RETREG3-211ENST00000591547 DPF3Q92784 378 aa12.5□□□□□ -0.41
RETREG3-211ENST00000591547 SNCAIPQ9Y6H5 919 aa12.5□□□□□ -0.41
RETREG3-211ENST00000591547 FAM205AQ6ZU69 1335 aa12.5□□□□□ -0.41
RETREG3-211ENST00000591547 RANBP2P49792 3224 aaKnown RBP12.5□□□□□ -0.41
RETREG3-211ENST00000591547 TLR2O60603 784 aa12.49□□□□□ -0.41
RETREG3-211ENST00000591547 LDHAL6AQ6ZMR3 332 aa12.49□□□□□ -0.41
RETREG3-211ENST00000591547 FAM9BQ8IZU0 186 aa12.49□□□□□ -0.41
RETREG3-211ENST00000591547 LINS1Q8NG48 757 aa12.49□□□□□ -0.41
RETREG3-211ENST00000591547 TDRD7Q8NHU6 1098 aaKnown RBP12.49□□□□□ -0.41
RETREG3-211ENST00000591547 FAM84BQ96KN1 310 aaPredicted RBP12.49□□□□□ -0.41
RETREG3-211ENST00000591547 PUS3Q9BZE2 481 aaKnown RBP12.49□□□□□ -0.41
RETREG3-211ENST00000591547 MYH16Q9H6N6 1097 aa12.49□□□□□ -0.41
RETREG3-211ENST00000591547 CNNM1Q9NRU3 951 aa12.49□□□□□ -0.41
RETREG3-211ENST00000591547 CPA4Q9UI42 421 aa12.49□□□□□ -0.41
RETREG3-211ENST00000591547 CSADQ9Y600 493 aa12.49□□□□□ -0.41
RETREG3-211ENST00000591547 SPDYE5A6NIY4 337 aa12.48□□□□□ -0.41
RETREG3-211ENST00000591547 IRF6O14896 467 aa12.48□□□□□ -0.41
RETREG3-211ENST00000591547 CHAF1AQ13111 956 aaPredicted RBP12.48□□□□□ -0.41
RETREG3-211ENST00000591547 TNFAIP1Q13829 316 aa12.48□□□□□ -0.41
RETREG3-211ENST00000591547 SERPINA10Q9UK55 444 aa12.48□□□□□ -0.41
RETREG3-211ENST00000591547 HIBADHP31937 336 aaKnown RBP12.47□□□□□ -0.41
RETREG3-211ENST00000591547 ARHGEF6Q15052 776 aa12.47□□□□□ -0.41
RETREG3-211ENST00000591547 TAF7LQ5H9L4 462 aa12.47□□□□□ -0.41
RETREG3-211ENST00000591547 TRIM47Q96LD4 638 aa12.47□□□□□ -0.41
RETREG3-211ENST00000591547 WRNIP1Q96S55 665 aa12.47□□□□□ -0.41
RETREG3-211ENST00000591547 CHMP4AQ9BY43 222 aa12.47□□□□□ -0.41
RETREG3-211ENST00000591547 CETPP11597 493 aa12.46□□□□□ -0.41
RETREG3-211ENST00000591547 OSBPP22059 807 aa12.46□□□□□ -0.41
RETREG3-211ENST00000591547 KIF22Q14807 665 aa12.46□□□□□ -0.41
RETREG3-211ENST00000591547 CCDC57Q2TAC2 916 aa12.46□□□□□ -0.41
RETREG3-211ENST00000591547 BEND3Q5T5X7 828 aa12.46□□□□□ -0.41
RETREG3-211ENST00000591547 C17orf99Q6UX52 265 aa12.46□□□□□ -0.41
RETREG3-211ENST00000591547 MIGA2Q7L4E1 593 aa12.46□□□□□ -0.41
RETREG3-211ENST00000591547 DLL1O00548 723 aa12.45□□□□□ -0.42
RETREG3-211ENST00000591547 SOX1O00570 391 aaPredicted RBP12.45□□□□□ -0.42
RETREG3-211ENST00000591547 CCL5P13501 91 aa12.45□□□□□ -0.42
RETREG3-211ENST00000591547 INPP5BP32019 993 aa12.45□□□□□ -0.42
RETREG3-211ENST00000591547 PSMC4P43686 418 aa12.45□□□□□ -0.42
RETREG3-211ENST00000591547 TNNI2P48788 182 aa12.45□□□□□ -0.42
RETREG3-211ENST00000591547 ERO1BQ86YB8 467 aa12.45□□□□□ -0.42
RETREG3-211ENST00000591547 WWC1Q8IX03 1113 aa12.45□□□□□ -0.42
RETREG3-211ENST00000591547 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.45□□□□□ -0.42
RETREG3-211ENST00000591547 COL6A3P12111 3177 aa12.44□□□□□ -0.42
RETREG3-211ENST00000591547 VAMP4O75379 141 aa12.44□□□□□ -0.42
RETREG3-211ENST00000591547 FMNL1O95466 1100 aaPredicted RBP12.44□□□□□ -0.42
RETREG3-211ENST00000591547 PPIL2Q13356 520 aa12.44□□□□□ -0.42
RETREG3-211ENST00000591547 SNAPC2Q13487 334 aa12.44□□□□□ -0.42
RETREG3-211ENST00000591547 UBE2Q1Q7Z7E8 422 aa12.44□□□□□ -0.42
RETREG3-211ENST00000591547 SLC17A8Q8NDX2 589 aa12.44□□□□□ -0.42
RETREG3-211ENST00000591547 PRO3102Q9H379 93 aa12.44□□□□□ -0.42
RETREG3-211ENST00000591547 SRRDQ9UH36 339 aa12.44□□□□□ -0.42
RETREG3-211ENST00000591547 SALL2Q9Y467 1007 aaPredicted RBP12.44□□□□□ -0.42
RETREG3-211ENST00000591547 MGAMO43451 1857 aa12.44□□□□□ -0.42
RETREG3-211ENST00000591547 FANCIQ9NVI1 1328 aa12.43□□□□□ -0.42
RETREG3-211ENST00000591547 PDHXO00330 501 aa12.43□□□□□ -0.42
RETREG3-211ENST00000591547 GRK4P32298 578 aa12.43□□□□□ -0.42
RETREG3-211ENST00000591547 EXOSC9Q06265 439 aaKnown RBP12.43□□□□□ -0.42
RETREG3-211ENST00000591547 MOGSQ13724 837 aa12.43□□□□□ -0.42
RETREG3-211ENST00000591547 UBE4AQ14139 1066 aa12.43□□□□□ -0.42
RETREG3-211ENST00000591547 RAET1EQ8TD07 263 aa12.43□□□□□ -0.42
RETREG3-211ENST00000591547 KAZALD1Q96I82 304 aa12.43□□□□□ -0.42
RETREG3-211ENST00000591547 SUCLG2Q96I99 432 aa12.43□□□□□ -0.42
RETREG3-211ENST00000591547 LRCH3Q96II8 777 aa12.43□□□□□ -0.42
RETREG3-211ENST00000591547 GABRQQ9UN88 632 aa12.43□□□□□ -0.42
RETREG3-211ENST00000591547 RIPOR2Q9Y4F9 1068 aa12.43□□□□□ -0.42
RETREG3-211ENST00000591547 CACNA1FO60840 1977 aa12.43□□□□□ -0.42
RETREG3-211ENST00000591547 MYPNQ86TC9 1320 aa12.42□□□□□ -0.42
RETREG3-211ENST00000591547 ADGRA2Q96PE1 1338 aa12.42□□□□□ -0.42
RETREG3-211ENST00000591547 GRM8O00222 908 aa12.42□□□□□ -0.42
RETREG3-211ENST00000591547 WDHD1O75717 1129 aaPredicted RBP12.42□□□□□ -0.42
RETREG3-211ENST00000591547 GJA8P48165 433 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms