RNA–Protein interactions for RNA: ENST00000590550.6

MBD3-207, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 2 BASIC

Gene MBD3, Length 2,782 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-207ENST00000590550 C8orf76Q96K31 380 aa22.29■■□□□ 1.16
MBD3-207ENST00000590550 AIFM3Q96NN9 605 aa22.29■■□□□ 1.16
MBD3-207ENST00000590550 ATG3Q9NT62 314 aa22.29■■□□□ 1.16
MBD3-207ENST00000590550 TMOD3Q9NYL9 352 aa22.29■■□□□ 1.16
MBD3-207ENST00000590550 ABCC6O95255 1503 aa22.29■■□□□ 1.16
MBD3-207ENST00000590550 NDUFA8P51970 172 aa22.29■■□□□ 1.16
MBD3-207ENST00000590550 METTL24Q5JXM2 366 aa22.29■■□□□ 1.16
MBD3-207ENST00000590550 FILIP1Q7Z7B0 1213 aa22.29■■□□□ 1.16
MBD3-207ENST00000590550 ORC3Q9UBD5 711 aaPredicted RBP22.29■■□□□ 1.16
MBD3-207ENST00000590550 MCAMP43121 646 aa22.28■■□□□ 1.16
MBD3-207ENST00000590550 DHX40Q8IX18 779 aaKnown RBP22.28■■□□□ 1.16
MBD3-207ENST00000590550 AOPEPQ8N6M6 819 aa22.28■■□□□ 1.16
MBD3-207ENST00000590550 SDF4Q9BRK5 362 aa22.28■■□□□ 1.16
MBD3-207ENST00000590550 GREM2Q9H772 168 aa22.28■■□□□ 1.16
MBD3-207ENST00000590550 KIF28PB7ZC32 967 aa22.28■■□□□ 1.16
MBD3-207ENST00000590550 EVA1CP58658 441 aa22.28■■□□□ 1.16
MBD3-207ENST00000590550 MB21D2Q8IYB1 491 aaPredicted RBP22.28■■□□□ 1.16
MBD3-207ENST00000590550 FEZ2Q9UHY8 353 aaPredicted RBP22.28■■□□□ 1.16
MBD3-207ENST00000590550 AKAP2Q9Y2D5 859 aa22.28■■□□□ 1.16
MBD3-207ENST00000590550 SF3A1Q15459 793 aaKnown RBP22.27■■□□□ 1.16
MBD3-207ENST00000590550 LDHAL6AQ6ZMR3 332 aa22.27■■□□□ 1.16
MBD3-207ENST00000590550 NWD2Q9ULI1 1742 aa22.27■■□□□ 1.16
MBD3-207ENST00000590550 USP27XA6NNY8 438 aa22.27■■□□□ 1.16
MBD3-207ENST00000590550 BIN1O00499 593 aa22.27■■□□□ 1.16
MBD3-207ENST00000590550 CPLX1O14810 134 aa22.27■■□□□ 1.16
MBD3-207ENST00000590550 STK38Q15208 465 aa22.27■■□□□ 1.16
MBD3-207ENST00000590550 NKX1-1Q15270 411 aaPredicted RBP22.27■■□□□ 1.16
MBD3-207ENST00000590550 RALYLQ86SE5 291 aaKnown RBP22.27■■□□□ 1.16
MBD3-207ENST00000590550 APPBP2Q92624 585 aa22.27■■□□□ 1.16
MBD3-207ENST00000590550 COL5A2P05997 1499 aaPredicted RBP22.27■■□□□ 1.16
MBD3-207ENST00000590550 ZNF213O14771 459 aa22.27■■□□□ 1.15
MBD3-207ENST00000590550 KIF6Q6ZMV9 814 aa22.27■■□□□ 1.15
MBD3-207ENST00000590550 MRPS27Q92552 414 aaKnown RBP22.27■■□□□ 1.15
MBD3-207ENST00000590550 ITGA6P23229 1130 aa22.26■■□□□ 1.15
MBD3-207ENST00000590550 FMR1NBQ8N0W7 255 aaPredicted RBP22.26■■□□□ 1.15
MBD3-207ENST00000590550 PIGBQ92521 554 aa22.26■■□□□ 1.15
MBD3-207ENST00000590550 NBPF3Q9H094 633 aa22.26■■□□□ 1.15
MBD3-207ENST00000590550 SENP2Q9HC62 589 aa22.26■■□□□ 1.15
MBD3-207ENST00000590550 INCENPQ9NQS7 918 aa22.26■■□□□ 1.15
MBD3-207ENST00000590550 MYH15Q9Y2K3 1946 aa22.26■■□□□ 1.15
MBD3-207ENST00000590550 DCCP43146 1447 aa22.26■■□□□ 1.15
MBD3-207ENST00000590550 IDH1O75874 414 aaKnown RBP22.26■■□□□ 1.15
MBD3-207ENST00000590550 APPP05067 770 aa22.26■■□□□ 1.15
MBD3-207ENST00000590550 ARHGAP30Q7Z6I6 1101 aaPredicted RBP22.26■■□□□ 1.15
MBD3-207ENST00000590550 LINC00301Q8NCQ3 95 aa22.26■■□□□ 1.15
MBD3-207ENST00000590550 CTAGE5O15320 804 aa22.25■■□□□ 1.15
MBD3-207ENST00000590550 TNNT3P45378 269 aaPredicted RBP22.25■■□□□ 1.15
MBD3-207ENST00000590550 RAD51AP2Q09MP3 1159 aa22.25■■□□□ 1.15
MBD3-207ENST00000590550 SLC9C2Q5TAH2 1124 aa22.25■■□□□ 1.15
MBD3-207ENST00000590550 ISM2Q6H9L7 571 aa22.25■■□□□ 1.15
MBD3-207ENST00000590550 NCOA7Q8NI08 942 aa22.25■■□□□ 1.15
MBD3-207ENST00000590550 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.25■■□□□ 1.15
MBD3-207ENST00000590550 ZNF446Q9NWS9 450 aa22.25■■□□□ 1.15
MBD3-207ENST00000590550 UBR2Q8IWV8 1755 aa22.25■■□□□ 1.15
MBD3-207ENST00000590550 PCCAP05165 728 aaPredicted RBP22.25■■□□□ 1.15
MBD3-207ENST00000590550 ZBTB38Q8NAP3 1195 aaPredicted RBP22.25■■□□□ 1.15
MBD3-207ENST00000590550 FBXO18Q8NFZ0 1043 aa22.25■■□□□ 1.15
MBD3-207ENST00000590550 HELBQ8NG08 1087 aaPredicted RBP22.25■■□□□ 1.15
MBD3-207ENST00000590550 RTEL1Q9NZ71 1219 aa22.25■■□□□ 1.15
MBD3-207ENST00000590550 PARP4Q9UKK3 1724 aaKnown RBP22.24■■□□□ 1.15
MBD3-207ENST00000590550 CYP2C19P33261 490 aa22.24■■□□□ 1.15
MBD3-207ENST00000590550 DPCR1Q3MIW9 517 aa22.24■■□□□ 1.15
MBD3-207ENST00000590550 CNNM1Q9NRU3 951 aa22.24■■□□□ 1.15
MBD3-207ENST00000590550 TRMT1Q9NXH9 659 aaKnown RBP22.24■■□□□ 1.15
MBD3-207ENST00000590550 SNAP23O00161 211 aa22.24■■□□□ 1.15
MBD3-207ENST00000590550 EVCP57679 992 aa22.24■■□□□ 1.15
MBD3-207ENST00000590550 TBC1D10CQ8IV04 446 aa22.24■■□□□ 1.15
MBD3-207ENST00000590550 LRRC8AQ8IWT6 810 aa22.24■■□□□ 1.15
MBD3-207ENST00000590550 CARD10Q9BWT7 1032 aa22.24■■□□□ 1.15
MBD3-207ENST00000590550 ZFYP08048 801 aaPredicted RBP22.23■■□□□ 1.15
MBD3-207ENST00000590550 MARCKSP29966 332 aaPredicted RBP22.23■■□□□ 1.15
MBD3-207ENST00000590550 PIH1D3Q9NQM4 214 aaKnown RBP22.23■■□□□ 1.15
MBD3-207ENST00000590550 ANO10Q9NW15 660 aa22.23■■□□□ 1.15
MBD3-207ENST00000590550 UBE2Q2LH0YL09 131 aa22.23■■□□□ 1.15
MBD3-207ENST00000590550 CSF1RP07333 972 aa22.23■■□□□ 1.15
MBD3-207ENST00000590550 MYSM1Q5VVJ2 828 aa22.23■■□□□ 1.15
MBD3-207ENST00000590550 ADALQ6DHV7 355 aa22.23■■□□□ 1.15
MBD3-207ENST00000590550 TTLL11Q8NHH1 800 aa22.23■■□□□ 1.15
MBD3-207ENST00000590550 FAM53CQ9NYF3 392 aa22.23■■□□□ 1.15
MBD3-207ENST00000590550 RIPOR2Q9Y4F9 1068 aa22.23■■□□□ 1.15
MBD3-207ENST00000590550 RIC1Q4ADV7 1423 aa22.23■■□□□ 1.15
MBD3-207ENST00000590550 CYB5R4Q7L1T6 521 aa22.22■■□□□ 1.15
MBD3-207ENST00000590550 TNS2Q63HR2 1409 aa22.22■■□□□ 1.15
MBD3-207ENST00000590550 CAVIN2O95810 425 aa22.22■■□□□ 1.15
MBD3-207ENST00000590550 LRRFIP1Q32MZ4 808 aaKnown RBP22.22■■□□□ 1.15
MBD3-207ENST00000590550 CEP57L1Q8IYX8 460 aa22.22■■□□□ 1.15
MBD3-207ENST00000590550 NEK11Q8NG66 645 aa22.22■■□□□ 1.15
MBD3-207ENST00000590550 PHKBQ93100 1093 aa22.22■■□□□ 1.15
MBD3-207ENST00000590550 MYL10Q9BUA6 226 aa22.22■■□□□ 1.15
MBD3-207ENST00000590550 SPTLC2O15270 562 aa22.21■■□□□ 1.15
MBD3-207ENST00000590550 PTPN14Q15678 1187 aa22.21■■□□□ 1.15
MBD3-207ENST00000590550 SARM1Q6SZW1 724 aa22.21■■□□□ 1.15
MBD3-207ENST00000590550 TMX1Q9H3N1 280 aa22.21■■□□□ 1.15
MBD3-207ENST00000590550 PHKA1P46020 1223 aa22.21■■□□□ 1.15
MBD3-207ENST00000590550 ATL3Q6DD88 541 aa22.21■■□□□ 1.15
MBD3-207ENST00000590550 NLRP10Q86W26 655 aa22.21■■□□□ 1.15
MBD3-207ENST00000590550 MICU3Q86XE3 530 aa22.21■■□□□ 1.15
MBD3-207ENST00000590550 PLEKHG2Q9H7P9 1386 aa22.21■■□□□ 1.15
MBD3-207ENST00000590550 B4E1Z4 1266 aa22.2■■□□□ 1.14
MBD3-207ENST00000590550 POLR3GO15318 223 aaPredicted RBP22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms