RNA–Protein interactions for RNA: ENST00000588972.1

ATG4D-210, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 632 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-210ENST00000588972 STK26Q9P289 416 aa10.79□□□□□ -0.68
ATG4D-210ENST00000588972 ANKIB1Q9P2G1 1089 aa10.79□□□□□ -0.68
ATG4D-210ENST00000588972 NRXN1Q9ULB1 1477 aa10.79□□□□□ -0.68
ATG4D-210ENST00000588972 SBNO1A3KN83 1393 aa10.78□□□□□ -0.68
ATG4D-210ENST00000588972 DHX57Q6P158 1386 aaKnown RBP10.78□□□□□ -0.68
ATG4D-210ENST00000588972 RGPD8O14715 1765 aaPredicted RBP10.78□□□□□ -0.68
ATG4D-210ENST00000588972 IRS1P35568 1242 aa10.78□□□□□ -0.68
ATG4D-210ENST00000588972 CTSOP43234 321 aaPredicted RBP10.78□□□□□ -0.68
ATG4D-210ENST00000588972 BAG6P46379 1132 aa10.78□□□□□ -0.68
ATG4D-210ENST00000588972 PDE12Q6L8Q7 609 aaKnown RBP10.78□□□□□ -0.68
ATG4D-210ENST00000588972 BICDL1Q6ZP65 573 aa10.78□□□□□ -0.68
ATG4D-210ENST00000588972 KRT28Q7Z3Y7 464 aa10.78□□□□□ -0.68
ATG4D-210ENST00000588972 ZNF438Q7Z4V0 828 aa10.78□□□□□ -0.68
ATG4D-210ENST00000588972 PUS7Q96PZ0 661 aaKnown RBP10.78□□□□□ -0.68
ATG4D-210ENST00000588972 ZFYVE28Q9HCC9 887 aa10.78□□□□□ -0.68
ATG4D-210ENST00000588972 PRKAG2Q9UGJ0 569 aa10.78□□□□□ -0.68
ATG4D-210ENST00000588972 DDX41Q9UJV9 622 aaKnown RBP10.78□□□□□ -0.68
ATG4D-210ENST00000588972 FNDC3AQ9Y2H6 1198 aaKnown RBP10.78□□□□□ -0.68
ATG4D-210ENST00000588972 RTCBQ9Y3I0 505 aaKnown RBP10.78□□□□□ -0.68
ATG4D-210ENST00000588972 KCNMB2Q9Y691 235 aa10.78□□□□□ -0.68
ATG4D-210ENST00000588972 GIPC1O14908 333 aa10.77□□□□□ -0.69
ATG4D-210ENST00000588972 PTPN12Q05209 780 aaKnown RBP10.77□□□□□ -0.69
ATG4D-210ENST00000588972 ZNF394Q53GI3 561 aa10.77□□□□□ -0.69
ATG4D-210ENST00000588972 NBPF10Q6P3W6 841 aaKnown RBP10.77□□□□□ -0.69
ATG4D-210ENST00000588972 BTLAQ7Z6A9 289 aa10.77□□□□□ -0.69
ATG4D-210ENST00000588972 NLRP2Q9NX02 1062 aa10.77□□□□□ -0.69
ATG4D-210ENST00000588972 COL14A1Q05707 1796 aaKnown RBP10.76□□□□□ -0.69
ATG4D-210ENST00000588972 A0A0G2JS52 829 aa10.76□□□□□ -0.69
ATG4D-210ENST00000588972 RACK1P63244 317 aaKnown RBP10.76□□□□□ -0.69
ATG4D-210ENST00000588972 POU4F2Q12837 409 aa10.76□□□□□ -0.69
ATG4D-210ENST00000588972 CMTR1Q8N1G2 835 aaKnown RBP10.76□□□□□ -0.69
ATG4D-210ENST00000588972 LINC00528Q8N1L1 170 aa10.76□□□□□ -0.69
ATG4D-210ENST00000588972 HPS1Q92902 700 aa10.76□□□□□ -0.69
ATG4D-210ENST00000588972 ZIC5Q96T25 663 aa10.76□□□□□ -0.69
ATG4D-210ENST00000588972 PCDHGB7Q9Y5F8 929 aa10.76□□□□□ -0.69
ATG4D-210ENST00000588972 V9GY48 417 aaPredicted RBP10.76□□□□□ -0.69
ATG4D-210ENST00000588972 USP31Q70CQ4 1352 aa10.76□□□□□ -0.69
ATG4D-210ENST00000588972 DISP2A7MBM2 1401 aa10.75□□□□□ -0.69
ATG4D-210ENST00000588972 TNS1Q9HBL0 1735 aaKnown RBP10.75□□□□□ -0.69
ATG4D-210ENST00000588972 ADGRB2O60241 1585 aa10.75□□□□□ -0.69
ATG4D-210ENST00000588972 TNFRSF10AO00220 468 aa10.75□□□□□ -0.69
ATG4D-210ENST00000588972 GNL2Q13823 731 aaKnown RBP10.75□□□□□ -0.69
ATG4D-210ENST00000588972 TMEM132EQ6IEE7 984 aa10.75□□□□□ -0.69
ATG4D-210ENST00000588972 USP48Q86UV5 1035 aa10.75□□□□□ -0.69
ATG4D-210ENST00000588972 ZNF654Q8IZM8 581 aa10.75□□□□□ -0.69
ATG4D-210ENST00000588972 GMLQ99445 158 aa10.75□□□□□ -0.69
ATG4D-210ENST00000588972 ELP3Q9H9T3 547 aa10.75□□□□□ -0.69
ATG4D-210ENST00000588972 TRPM3Q9HCF6 1732 aaPredicted RBP10.75□□□□□ -0.69
ATG4D-210ENST00000588972 ANKARQ7Z5J8 1434 aa10.75□□□□□ -0.69
ATG4D-210ENST00000588972 ALS2Q96Q42 1657 aa10.74□□□□□ -0.69
ATG4D-210ENST00000588972 THSD7AQ9UPZ6 1657 aa10.74□□□□□ -0.69
ATG4D-210ENST00000588972 SMARCA5O60264 1052 aaPredicted RBP10.74□□□□□ -0.69
ATG4D-210ENST00000588972 PHACTR2O75167 634 aa10.74□□□□□ -0.69
ATG4D-210ENST00000588972 GRNP28799 593 aaKnown RBP10.74□□□□□ -0.69
ATG4D-210ENST00000588972 HS2ST1Q7LGA3 356 aa10.74□□□□□ -0.69
ATG4D-210ENST00000588972 RNF217Q8TC41 542 aa10.74□□□□□ -0.69
ATG4D-210ENST00000588972 SRA1Q9HD15 236 aaKnown RBP10.74□□□□□ -0.69
ATG4D-210ENST00000588972 TMEM63CQ9P1W3 806 aa10.74□□□□□ -0.69
ATG4D-210ENST00000588972 ATP2B1P20020 1258 aa10.73□□□□□ -0.69
ATG4D-210ENST00000588972 WDR44Q5JSH3 913 aa10.73□□□□□ -0.69
ATG4D-210ENST00000588972 MEI1Q5TIA1 1274 aa10.73□□□□□ -0.69
ATG4D-210ENST00000588972 LRRC69Q6ZNQ3 347 aa10.73□□□□□ -0.69
ATG4D-210ENST00000588972 DPH6Q7L8W6 267 aa10.73□□□□□ -0.69
ATG4D-210ENST00000588972 PRICKLE2Q7Z3G6 844 aa10.73□□□□□ -0.69
ATG4D-210ENST00000588972 SPATA32Q96LK8 384 aa10.73□□□□□ -0.69
ATG4D-210ENST00000588972 NEUROD4Q9HD90 331 aa10.73□□□□□ -0.69
ATG4D-210ENST00000588972 NPHS2Q9NP85 383 aa10.73□□□□□ -0.69
ATG4D-210ENST00000588972 INPP5FQ9Y2H2 1132 aa10.73□□□□□ -0.69
ATG4D-210ENST00000588972 FAM83GA6ND36 823 aa10.72□□□□□ -0.69
ATG4D-210ENST00000588972 ARSJQ5FYB0 599 aaPredicted RBP10.72□□□□□ -0.69
ATG4D-210ENST00000588972 DHX38Q92620 1227 aaKnown RBP10.72□□□□□ -0.69
ATG4D-210ENST00000588972 SIN3AQ96ST3 1273 aa10.72□□□□□ -0.69
ATG4D-210ENST00000588972 DNAJC2Q99543 621 aaKnown RBP10.72□□□□□ -0.69
ATG4D-210ENST00000588972 FAM8A1Q9UBU6 413 aa10.72□□□□□ -0.69
ATG4D-210ENST00000588972 GGT7Q9UJ14 662 aa10.72□□□□□ -0.69
ATG4D-210ENST00000588972 DLC1Q96QB1 1528 aa10.72□□□□□ -0.69
ATG4D-210ENST00000588972 CRYBG1Q9Y4K1 1723 aa10.72□□□□□ -0.69
ATG4D-210ENST00000588972 UPP2O95045 317 aa10.71□□□□□ -0.69
ATG4D-210ENST00000588972 POLR3DP05423 398 aaPredicted RBP10.71□□□□□ -0.69
ATG4D-210ENST00000588972 USP17L7P0C7H9 530 aa10.71□□□□□ -0.69
ATG4D-210ENST00000588972 MSX1P28360 303 aa10.71□□□□□ -0.69
ATG4D-210ENST00000588972 DNAJA1P31689 397 aaKnown RBP10.71□□□□□ -0.69
ATG4D-210ENST00000588972 TAF1CQ15572 869 aaPredicted RBP10.71□□□□□ -0.69
ATG4D-210ENST00000588972 BTG4Q9NY30 223 aa10.71□□□□□ -0.69
ATG4D-210ENST00000588972 EIF3AQ14152 1382 aaKnown RBP10.7□□□□□ -0.7
ATG4D-210ENST00000588972 A0A1B0GTH6 734 aa10.7□□□□□ -0.7
ATG4D-210ENST00000588972 CAPN5O15484 640 aaPredicted RBP10.7□□□□□ -0.7
ATG4D-210ENST00000588972 HMGB1P09429 215 aaKnown RBP10.7□□□□□ -0.7
ATG4D-210ENST00000588972 HSP90B1P14625 803 aaKnown RBP10.7□□□□□ -0.7
ATG4D-210ENST00000588972 ST13P50502 369 aaKnown RBP10.7□□□□□ -0.7
ATG4D-210ENST00000588972 TYRO3Q06418 890 aa10.7□□□□□ -0.7
ATG4D-210ENST00000588972 R3HDM1Q15032 1099 aaKnown RBP10.7□□□□□ -0.7
ATG4D-210ENST00000588972 NXPE4Q6UWF7 544 aa10.7□□□□□ -0.7
ATG4D-210ENST00000588972 LYSMD3Q7Z3D4 306 aa10.7□□□□□ -0.7
ATG4D-210ENST00000588972 GALNT12Q8IXK2 581 aa10.7□□□□□ -0.7
ATG4D-210ENST00000588972 ARMC5Q96C12 935 aa10.7□□□□□ -0.7
ATG4D-210ENST00000588972 SRCIN1Q9C0H9 1055 aa10.7□□□□□ -0.7
ATG4D-210ENST00000588972 CHRDQ9H2X0 955 aa10.7□□□□□ -0.7
ATG4D-210ENST00000588972 TULP4Q9NRJ4 1543 aa10.69□□□□□ -0.7
ATG4D-210ENST00000588972 GPRASP1Q5JY77 1395 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms