RNA–Protein interactions for RNA: ENST00000587904.5

LINC01539-201, Transcript of long intergenic non-protein coding RNA 1539, humanhuman

TSL 2 BASIC

Gene LINC01539, Length 2,068 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01539-201ENST00000587904 CTIFO43310 598 aaKnown RBP11.31□□□□□ -0.6
LINC01539-201ENST00000587904 BAG4O95429 457 aaKnown RBP11.31□□□□□ -0.6
LINC01539-201ENST00000587904 TNNT3P45378 269 aaPredicted RBP11.31□□□□□ -0.6
LINC01539-201ENST00000587904 SLC27A3Q5K4L6 730 aa11.31□□□□□ -0.6
LINC01539-201ENST00000587904 ZNF772Q68DY9 489 aaPredicted RBP11.31□□□□□ -0.6
LINC01539-201ENST00000587904 ANKRD18AQ8IVF6 992 aa11.31□□□□□ -0.6
LINC01539-201ENST00000587904 CTNNA3Q9UI47 895 aa11.31□□□□□ -0.6
LINC01539-201ENST00000587904 LOC102724159A0A0B4J2E5 919 aa11.3□□□□□ -0.6
LINC01539-201ENST00000587904 BRD1O95696 1058 aa11.3□□□□□ -0.6
LINC01539-201ENST00000587904 HSPD1P10809 573 aaKnown RBP11.3□□□□□ -0.6
LINC01539-201ENST00000587904 NOP2P46087 812 aaKnown RBP11.3□□□□□ -0.6
LINC01539-201ENST00000587904 KCNQ4P56696 695 aa11.3□□□□□ -0.6
LINC01539-201ENST00000587904 PWP2Q15269 919 aaKnown RBP11.3□□□□□ -0.6
LINC01539-201ENST00000587904 UBE3CQ15386 1083 aa11.3□□□□□ -0.6
LINC01539-201ENST00000587904 EGFL6Q8IUX8 553 aa11.3□□□□□ -0.6
LINC01539-201ENST00000587904 CARMIL3Q8ND23 1372 aa11.3□□□□□ -0.6
LINC01539-201ENST00000587904 PHKA1P46020 1223 aa11.29□□□□□ -0.6
LINC01539-201ENST00000587904 GTF2A1P52655 376 aaPredicted RBP11.29□□□□□ -0.6
LINC01539-201ENST00000587904 TRAPPC3LQ5T215 181 aa11.29□□□□□ -0.6
LINC01539-201ENST00000587904 FAM182BQ5T319 152 aa11.29□□□□□ -0.6
LINC01539-201ENST00000587904 TPTE2Q6XPS3 522 aa11.29□□□□□ -0.6
LINC01539-201ENST00000587904 NBPF5PQ86XG9 351 aaPredicted RBP11.29□□□□□ -0.6
LINC01539-201ENST00000587904 OSBP2Q969R2 916 aa11.29□□□□□ -0.6
LINC01539-201ENST00000587904 NEK1Q96PY6 1258 aa11.29□□□□□ -0.6
LINC01539-201ENST00000587904 SPTLC3Q9NUV7 552 aa11.29□□□□□ -0.6
LINC01539-201ENST00000587904 BSDC1Q9NW68 430 aaPredicted RBP11.29□□□□□ -0.6
LINC01539-201ENST00000587904 DDX41Q9UJV9 622 aaKnown RBP11.29□□□□□ -0.6
LINC01539-201ENST00000587904 CEP83Q9Y592 693 aa11.29□□□□□ -0.6
LINC01539-201ENST00000587904 WDR33Q9C0J8 1336 aaKnown RBP11.29□□□□□ -0.6
LINC01539-201ENST00000587904 UBR3Q6ZT12 1888 aa11.29□□□□□ -0.6
LINC01539-201ENST00000587904 M0R2C6 588 aa11.29□□□□□ -0.6
LINC01539-201ENST00000587904 CYP21A2P08686 494 aa11.29□□□□□ -0.6
LINC01539-201ENST00000587904 CPA1P15085 419 aa11.29□□□□□ -0.6
LINC01539-201ENST00000587904 RFC4P35249 363 aa11.29□□□□□ -0.6
LINC01539-201ENST00000587904 ADD2P35612 726 aa11.29□□□□□ -0.6
LINC01539-201ENST00000587904 CHRNDQ07001 517 aa11.29□□□□□ -0.6
LINC01539-201ENST00000587904 WASHC4Q2M389 1173 aa11.29□□□□□ -0.6
LINC01539-201ENST00000587904 ARHGEF1Q92888 912 aaKnown RBP11.29□□□□□ -0.6
LINC01539-201ENST00000587904 NLRP3Q96P20 1036 aa11.29□□□□□ -0.6
LINC01539-201ENST00000587904 RBSNQ9H1K0 784 aa11.29□□□□□ -0.6
LINC01539-201ENST00000587904 BRWD3Q6RI45 1802 aa11.29□□□□□ -0.6
LINC01539-201ENST00000587904 CHGBP05060 677 aa11.28□□□□□ -0.6
LINC01539-201ENST00000587904 UBE4AQ14139 1066 aa11.28□□□□□ -0.6
LINC01539-201ENST00000587904 KRT27Q7Z3Y8 459 aa11.28□□□□□ -0.6
LINC01539-201ENST00000587904 SPATA5Q8NB90 893 aa11.28□□□□□ -0.6
LINC01539-201ENST00000587904 TSC1Q92574 1164 aa11.28□□□□□ -0.6
LINC01539-201ENST00000587904 CHMP4CQ96CF2 233 aa11.28□□□□□ -0.6
LINC01539-201ENST00000587904 SRP68Q9UHB9 627 aaKnown RBP11.28□□□□□ -0.6
LINC01539-201ENST00000587904 SMC3Q9UQE7 1217 aa11.28□□□□□ -0.6
LINC01539-201ENST00000587904 ZDHHC9Q9Y397 364 aa11.28□□□□□ -0.6
LINC01539-201ENST00000587904 SATB1Q01826 763 aa11.28□□□□□ -0.6
LINC01539-201ENST00000587904 PKP1Q13835 747 aa11.28□□□□□ -0.6
LINC01539-201ENST00000587904 PI16Q6UXB8 463 aa11.28□□□□□ -0.6
LINC01539-201ENST00000587904 HELBQ8NG08 1087 aaPredicted RBP11.28□□□□□ -0.6
LINC01539-201ENST00000587904 DDX49Q9Y6V7 483 aaKnown RBP11.28□□□□□ -0.6
LINC01539-201ENST00000587904 ZNF804BA4D1E1 1349 aa11.27□□□□□ -0.61
LINC01539-201ENST00000587904 MAP3K12Q12852 859 aa11.27□□□□□ -0.61
LINC01539-201ENST00000587904 NOLC1Q14978 699 aaKnown RBP eCLIP11.27□□□□□ -0.61
LINC01539-201ENST00000587904 IMMTQ16891 758 aaKnown RBP11.27□□□□□ -0.61
LINC01539-201ENST00000587904 BICDL1Q6ZP65 573 aa11.27□□□□□ -0.61
LINC01539-201ENST00000587904 GNL3LQ9NVN8 582 aaKnown RBP11.27□□□□□ -0.61
LINC01539-201ENST00000587904 LAMA4Q16363 1823 aa11.26□□□□□ -0.61
LINC01539-201ENST00000587904 ZMYM6O95789 1325 aa11.26□□□□□ -0.61
LINC01539-201ENST00000587904 GPAA1O43292 621 aa11.26□□□□□ -0.61
LINC01539-201ENST00000587904 CCDC172P0C7W6 258 aa11.26□□□□□ -0.61
LINC01539-201ENST00000587904 CHAF1AQ13111 956 aaPredicted RBP11.26□□□□□ -0.61
LINC01539-201ENST00000587904 RASGRF1Q13972 1273 aa11.26□□□□□ -0.61
LINC01539-201ENST00000587904 TOB2Q14106 344 aaPredicted RBP11.26□□□□□ -0.61
LINC01539-201ENST00000587904 SLC9C2Q5TAH2 1124 aa11.26□□□□□ -0.61
LINC01539-201ENST00000587904 ICE2Q659A1 982 aa11.26□□□□□ -0.61
LINC01539-201ENST00000587904 DHX32Q7L7V1 743 aaKnown RBP11.26□□□□□ -0.61
LINC01539-201ENST00000587904 PIH1D3Q9NQM4 214 aaKnown RBP11.26□□□□□ -0.61
LINC01539-201ENST00000587904 TPCN1Q9ULQ1 816 aa11.26□□□□□ -0.61
LINC01539-201ENST00000587904 TAF6LQ9Y6J9 622 aa11.26□□□□□ -0.61
LINC01539-201ENST00000587904 COL4A1P02462 1669 aa11.26□□□□□ -0.61
LINC01539-201ENST00000587904 IDH1O75874 414 aaKnown RBP11.26□□□□□ -0.61
LINC01539-201ENST00000587904 LARGE1O95461 756 aa11.26□□□□□ -0.61
LINC01539-201ENST00000587904 PDE6AP16499 860 aa11.26□□□□□ -0.61
LINC01539-201ENST00000587904 ME3Q16798 604 aa11.26□□□□□ -0.61
LINC01539-201ENST00000587904 ZSCAN23Q3MJ62 389 aa11.26□□□□□ -0.61
LINC01539-201ENST00000587904 C3orf67Q6ZVT6 689 aa11.26□□□□□ -0.61
LINC01539-201ENST00000587904 CCDC83Q8IWF9 413 aa11.26□□□□□ -0.61
LINC01539-201ENST00000587904 KRT222Q8N1A0 295 aa11.26□□□□□ -0.61
LINC01539-201ENST00000587904 FBXL16Q8N461 479 aa11.26□□□□□ -0.61
LINC01539-201ENST00000587904 ANKRD2Q9GZV1 360 aa11.26□□□□□ -0.61
LINC01539-201ENST00000587904 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.26□□□□□ -0.61
LINC01539-201ENST00000587904 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.26□□□□□ -0.61
LINC01539-201ENST00000587904 PDS5AQ29RF7 1337 aaKnown RBP11.25□□□□□ -0.61
LINC01539-201ENST00000587904 E7EWF7 191 aa11.25□□□□□ -0.61
LINC01539-201ENST00000587904 SEMA3EO15041 775 aa11.25□□□□□ -0.61
LINC01539-201ENST00000587904 DHX16O60231 1041 aaKnown RBP11.25□□□□□ -0.61
LINC01539-201ENST00000587904 PDCP20941 246 aa11.25□□□□□ -0.61
LINC01539-201ENST00000587904 SLFNL1Q499Z3 407 aa11.25□□□□□ -0.61
LINC01539-201ENST00000587904 PLCD4Q9BRC7 762 aa11.25□□□□□ -0.61
LINC01539-201ENST00000587904 AGXT2Q9BYV1 514 aa11.25□□□□□ -0.61
LINC01539-201ENST00000587904 PUS7LQ9H0K6 701 aaKnown RBP11.25□□□□□ -0.61
LINC01539-201ENST00000587904 RASSF4Q9H2L5 321 aa11.25□□□□□ -0.61
LINC01539-201ENST00000587904 LRRC4BQ9NT99 713 aa11.25□□□□□ -0.61
LINC01539-201ENST00000587904 ATP6V1DQ9Y5K8 247 aa11.25□□□□□ -0.61
LINC01539-201ENST00000587904 TNRC6CQ9HCJ0 1690 aaKnown RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms