RNA–Protein interactions for RNA: ENST00000584754.1

PPP4R1-229, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 5

Gene PPP4R1, Length 509 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-229ENST00000584754 FCGRTP55899 365 aa6.23□□□□□ -1.41
PPP4R1-229ENST00000584754 FAAP100Q0VG06 881 aa6.23□□□□□ -1.41
PPP4R1-229ENST00000584754 NXPE4Q6UWF7 544 aa6.23□□□□□ -1.41
PPP4R1-229ENST00000584754 SND1Q7KZF4 910 aaKnown RBP eCLIP6.23□□□□□ -1.41
PPP4R1-229ENST00000584754 C12orf50Q8NA57 414 aaPredicted RBP6.23□□□□□ -1.41
PPP4R1-229ENST00000584754 BCO2Q9BYV7 579 aa6.23□□□□□ -1.41
PPP4R1-229ENST00000584754 ERCC3P19447 782 aa6.22□□□□□ -1.41
PPP4R1-229ENST00000584754 RANGAP1P46060 587 aaPredicted RBP6.22□□□□□ -1.41
PPP4R1-229ENST00000584754 ENOX2Q16206 610 aaKnown RBP6.22□□□□□ -1.41
PPP4R1-229ENST00000584754 UTP4Q969X6 686 aaKnown RBP6.22□□□□□ -1.41
PPP4R1-229ENST00000584754 FAM46AQ96IP4 442 aaKnown RBP6.22□□□□□ -1.41
PPP4R1-229ENST00000584754 TRIM56Q9BRZ2 755 aaKnown RBP6.22□□□□□ -1.41
PPP4R1-229ENST00000584754 ZC3H12CQ9C0D7 883 aaKnown RBP6.22□□□□□ -1.41
PPP4R1-229ENST00000584754 NRSN2Q9GZP1 204 aa6.22□□□□□ -1.41
PPP4R1-229ENST00000584754 NLRP2Q9NX02 1062 aa6.22□□□□□ -1.41
PPP4R1-229ENST00000584754 PPP4R2Q9NY27 417 aa6.22□□□□□ -1.41
PPP4R1-229ENST00000584754 HMX2A2RU54 273 aa6.21□□□□□ -1.42
PPP4R1-229ENST00000584754 SART1O43290 800 aaKnown RBP6.21□□□□□ -1.42
PPP4R1-229ENST00000584754 BMP3P12645 472 aa6.21□□□□□ -1.42
PPP4R1-229ENST00000584754 ITPKAP23677 461 aa6.21□□□□□ -1.42
PPP4R1-229ENST00000584754 CCDC27Q2M243 656 aa6.21□□□□□ -1.42
PPP4R1-229ENST00000584754 NUTM2GQ5VZR2 741 aa6.21□□□□□ -1.42
PPP4R1-229ENST00000584754 FDX2Q6P4F2 183 aa6.21□□□□□ -1.42
PPP4R1-229ENST00000584754 ZSCAN29Q8IWY8 852 aaPredicted RBP6.21□□□□□ -1.42
PPP4R1-229ENST00000584754 DDX54Q8TDD1 881 aaKnown RBP6.21□□□□□ -1.42
PPP4R1-229ENST00000584754 ASB16Q96NS5 453 aa6.21□□□□□ -1.42
PPP4R1-229ENST00000584754 TMPRSS13Q9BYE2 586 aa6.21□□□□□ -1.42
PPP4R1-229ENST00000584754 CEP41Q9BYV8 373 aa6.21□□□□□ -1.42
PPP4R1-229ENST00000584754 RNF208Q9H0X6 261 aa6.21□□□□□ -1.42
PPP4R1-229ENST00000584754 KCNF1Q9H3M0 494 aa6.21□□□□□ -1.42
PPP4R1-229ENST00000584754 RNF19AQ9NV58 838 aa6.21□□□□□ -1.42
PPP4R1-229ENST00000584754 STOML1Q9UBI4 398 aa6.21□□□□□ -1.42
PPP4R1-229ENST00000584754 AKAP2Q9Y2D5 859 aa6.21□□□□□ -1.42
PPP4R1-229ENST00000584754 B3GALT4O96024 378 aa6.2□□□□□ -1.42
PPP4R1-229ENST00000584754 P4HBP07237 508 aaKnown RBP6.2□□□□□ -1.42
PPP4R1-229ENST00000584754 POU4F3Q15319 338 aa6.2□□□□□ -1.42
PPP4R1-229ENST00000584754 DTHD1Q6ZMT9 781 aa6.2□□□□□ -1.42
PPP4R1-229ENST00000584754 TRIM42Q8IWZ5 723 aa6.2□□□□□ -1.42
PPP4R1-229ENST00000584754 SOX17Q9H6I2 414 aaPredicted RBP6.2□□□□□ -1.42
PPP4R1-229ENST00000584754 RAXQ9Y2V3 346 aa6.2□□□□□ -1.42
PPP4R1-229ENST00000584754 MEGF11A6BM72 1044 aa6.19□□□□□ -1.42
PPP4R1-229ENST00000584754 DHX15O43143 795 aaKnown RBP6.19□□□□□ -1.42
PPP4R1-229ENST00000584754 FSTP19883 344 aa6.19□□□□□ -1.42
PPP4R1-229ENST00000584754 FMR1Q06787 632 aaKnown RBP eCLIP6.19□□□□□ -1.42
PPP4R1-229ENST00000584754 SGO2Q562F6 1265 aa6.19□□□□□ -1.42
PPP4R1-229ENST00000584754 EXOSC6Q5RKV6 272 aaKnown RBP6.19□□□□□ -1.42
PPP4R1-229ENST00000584754 PRPF40BQ6NWY9 871 aaKnown RBP6.19□□□□□ -1.42
PPP4R1-229ENST00000584754 MYRFLQ96LU7 910 aa6.19□□□□□ -1.42
PPP4R1-229ENST00000584754 OSBPL7Q9BZF2 842 aa6.19□□□□□ -1.42
PPP4R1-229ENST00000584754 C7orf69Q9H7B7 122 aa6.19□□□□□ -1.42
PPP4R1-229ENST00000584754 ZFYVE1Q9HBF4 777 aa6.19□□□□□ -1.42
PPP4R1-229ENST00000584754 TRAK1Q9UPV9 953 aa6.19□□□□□ -1.42
PPP4R1-229ENST00000584754 MFAP1P55081 439 aaKnown RBP6.18□□□□□ -1.42
PPP4R1-229ENST00000584754 AKAP4Q5JQC9 854 aa6.18□□□□□ -1.42
PPP4R1-229ENST00000584754 ANKRD34AQ69YU3 496 aa6.18□□□□□ -1.42
PPP4R1-229ENST00000584754 FAM20CQ8IXL6 584 aa6.18□□□□□ -1.42
PPP4R1-229ENST00000584754 STK35Q8TDR2 534 aa6.18□□□□□ -1.42
PPP4R1-229ENST00000584754 WDR89Q96FK6 387 aaPredicted RBP6.18□□□□□ -1.42
PPP4R1-229ENST00000584754 GOLGA2P5Q9HBQ8 144 aa6.18□□□□□ -1.42
PPP4R1-229ENST00000584754 ANKRD33BA6NCL7 494 aa6.17□□□□□ -1.42
PPP4R1-229ENST00000584754 GAS2O43903 313 aaKnown RBP6.17□□□□□ -1.42
PPP4R1-229ENST00000584754 FBXO24O75426 580 aa6.17□□□□□ -1.42
PPP4R1-229ENST00000584754 TIAF1O95411 115 aa6.17□□□□□ -1.42
PPP4R1-229ENST00000584754 CYP11A1P05108 521 aa6.17□□□□□ -1.42
PPP4R1-229ENST00000584754 LIG1P18858 919 aa6.17□□□□□ -1.42
PPP4R1-229ENST00000584754 HNRNPUQ00839 825 aaKnown RBP eCLIP6.17□□□□□ -1.42
PPP4R1-229ENST00000584754 HP1BP3Q5SSJ5 553 aaPredicted RBP6.17□□□□□ -1.42
PPP4R1-229ENST00000584754 CDPF1Q6NVV7 123 aa6.17□□□□□ -1.42
PPP4R1-229ENST00000584754 BEND4Q6ZU67 534 aa6.17□□□□□ -1.42
PPP4R1-229ENST00000584754 SHISA5Q8N114 240 aa6.17□□□□□ -1.42
PPP4R1-229ENST00000584754 SMG8Q8ND04 991 aaKnown RBP6.17□□□□□ -1.42
PPP4R1-229ENST00000584754 FBLIM1Q8WUP2 373 aa6.17□□□□□ -1.42
PPP4R1-229ENST00000584754 CORO1BQ9BR76 489 aa6.17□□□□□ -1.42
PPP4R1-229ENST00000584754 BCL11AQ9H165 835 aa6.17□□□□□ -1.42
PPP4R1-229ENST00000584754 RAD18Q9NS91 495 aa6.17□□□□□ -1.42
PPP4R1-229ENST00000584754 GPN3Q9UHW5 284 aaPredicted RBP6.17□□□□□ -1.42
PPP4R1-229ENST00000584754 MAP4P27816 1152 aaKnown RBP6.16□□□□□ -1.42
PPP4R1-229ENST00000584754 RXRBP28702 533 aa6.16□□□□□ -1.42
PPP4R1-229ENST00000584754 SOX4Q06945 474 aaPredicted RBP6.16□□□□□ -1.42
PPP4R1-229ENST00000584754 PDE3AQ14432 1141 aa6.16□□□□□ -1.42
PPP4R1-229ENST00000584754 MPRIPQ6WCQ1 1025 aa6.16□□□□□ -1.42
PPP4R1-229ENST00000584754 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.16□□□□□ -1.42
PPP4R1-229ENST00000584754 C2CD4AQ8NCU7 369 aaPredicted RBP6.16□□□□□ -1.42
PPP4R1-229ENST00000584754 CCDC86Q9H6F5 360 aaKnown RBP6.16□□□□□ -1.42
PPP4R1-229ENST00000584754 LGR6Q9HBX8 967 aa6.16□□□□□ -1.42
PPP4R1-229ENST00000584754 CYP4F12Q9HCS2 524 aa6.16□□□□□ -1.42
PPP4R1-229ENST00000584754 LDHBP07195 334 aaKnown RBP6.15□□□□□ -1.42
PPP4R1-229ENST00000584754 USP11P51784 963 aa6.15□□□□□ -1.42
PPP4R1-229ENST00000584754 PTPN12Q05209 780 aaKnown RBP6.15□□□□□ -1.42
PPP4R1-229ENST00000584754 TPTE2Q6XPS3 522 aa6.15□□□□□ -1.42
PPP4R1-229ENST00000584754 DYMQ7RTS9 669 aa6.15□□□□□ -1.42
PPP4R1-229ENST00000584754 C3orf58Q8NDZ4 430 aa6.15□□□□□ -1.42
PPP4R1-229ENST00000584754 SUGCTQ9HAC7 445 aa6.15□□□□□ -1.42
PPP4R1-229ENST00000584754 PPP1R9AQ9ULJ8 1098 aa6.15□□□□□ -1.42
PPP4R1-229ENST00000584754 PAGE1O75459 146 aa6.14□□□□□ -1.43
PPP4R1-229ENST00000584754 IGLV1-40P01703 118 aa6.14□□□□□ -1.43
PPP4R1-229ENST00000584754 ADH5P11766 374 aa6.14□□□□□ -1.43
PPP4R1-229ENST00000584754 TAGLNQ01995 201 aaKnown RBP6.14□□□□□ -1.43
PPP4R1-229ENST00000584754 NFKBIBQ15653 356 aa6.14□□□□□ -1.43
PPP4R1-229ENST00000584754 UVSSAQ2YD98 709 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 331.2 ms