RNA–Protein interactions for RNA: ENST00000584437.5

RNF43-208, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 5,575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-208ENST00000584437 RILPL1Q5EBL4 403 aa14.68□□□□□ -0.06
RNF43-208ENST00000584437 CBX8Q9HC52 389 aa14.68□□□□□ -0.06
RNF43-208ENST00000584437 ACTN4O43707 911 aaKnown RBP14.68□□□□□ -0.06
RNF43-208ENST00000584437 CIB2O75838 187 aa14.68□□□□□ -0.06
RNF43-208ENST00000584437 RAB3IL1Q8TBN0 382 aa14.68□□□□□ -0.06
RNF43-208ENST00000584437 IMPG2Q9BZV3 1241 aa14.68□□□□□ -0.06
RNF43-208ENST00000584437 PLCB3Q01970 1234 aa14.68□□□□□ -0.06
RNF43-208ENST00000584437 SEL1L2Q5TEA6 688 aa14.68□□□□□ -0.06
RNF43-208ENST00000584437 PPFIA1Q13136 1202 aa14.67□□□□□ -0.06
RNF43-208ENST00000584437 LMBR1LQ6UX01 489 aa14.67□□□□□ -0.06
RNF43-208ENST00000584437 TMTC1Q8IUR5 882 aa14.67□□□□□ -0.06
RNF43-208ENST00000584437 GPR161Q8N6U8 529 aaKnown RBP14.67□□□□□ -0.06
RNF43-208ENST00000584437 EEF2P13639 858 aaKnown RBP14.67□□□□□ -0.06
RNF43-208ENST00000584437 MLKLQ8NB16 471 aa14.67□□□□□ -0.06
RNF43-208ENST00000584437 RGS22Q8NE09 1264 aa14.67□□□□□ -0.06
RNF43-208ENST00000584437 AOX1Q06278 1338 aa14.67□□□□□ -0.06
RNF43-208ENST00000584437 ANXA1P04083 346 aa14.67□□□□□ -0.06
RNF43-208ENST00000584437 CCDC25Q86WR0 208 aa14.67□□□□□ -0.06
RNF43-208ENST00000584437 XAGE3Q8WTP9 111 aa14.67□□□□□ -0.06
RNF43-208ENST00000584437 RPS6KB1P23443 525 aa14.67□□□□□ -0.06
RNF43-208ENST00000584437 RPL13P26373 211 aaKnown RBP14.67□□□□□ -0.06
RNF43-208ENST00000584437 GNA11P29992 359 aa14.66□□□□□ -0.06
RNF43-208ENST00000584437 CLNS1AP54105 237 aaKnown RBP14.66□□□□□ -0.06
RNF43-208ENST00000584437 NUP58Q9BVL2 599 aa14.66□□□□□ -0.06
RNF43-208ENST00000584437 SSX2IPQ9Y2D8 614 aa14.66□□□□□ -0.06
RNF43-208ENST00000584437 MAPKBP1O60336 1514 aa14.66□□□□□ -0.06
RNF43-208ENST00000584437 GBP1P32455 592 aa14.66□□□□□ -0.06
RNF43-208ENST00000584437 PUS7Q96PZ0 661 aaKnown RBP14.66□□□□□ -0.06
RNF43-208ENST00000584437 HDAC9Q9UKV0 1011 aa14.66□□□□□ -0.06
RNF43-208ENST00000584437 TNNQ9UQP3 1299 aa14.66□□□□□ -0.06
RNF43-208ENST00000584437 GOLGA6BA6NDN3 693 aa14.66□□□□□ -0.06
RNF43-208ENST00000584437 TMEM110-MUSTN1A8MSY1 372 aa14.66□□□□□ -0.06
RNF43-208ENST00000584437 CSRNP2Q9H175 543 aa14.66□□□□□ -0.06
RNF43-208ENST00000584437 RBM28Q9NW13 759 aaKnown RBP14.66□□□□□ -0.06
RNF43-208ENST00000584437 ZNF500O60304 480 aaPredicted RBP14.66□□□□□ -0.06
RNF43-208ENST00000584437 HPDP32754 393 aaPredicted RBP14.66□□□□□ -0.06
RNF43-208ENST00000584437 PCK1P35558 622 aa14.66□□□□□ -0.06
RNF43-208ENST00000584437 TBC1D8BQ0IIM8 1120 aa14.66□□□□□ -0.06
RNF43-208ENST00000584437 HELLSQ9NRZ9 838 aa14.66□□□□□ -0.06
RNF43-208ENST00000584437 FEZ2Q9UHY8 353 aaPredicted RBP14.66□□□□□ -0.06
RNF43-208ENST00000584437 CUL7Q14999 1698 aa14.66□□□□□ -0.06
RNF43-208ENST00000584437 PLCD1P51178 756 aa14.66□□□□□ -0.06
RNF43-208ENST00000584437 KDM2BQ8NHM5 1336 aa14.65□□□□□ -0.06
RNF43-208ENST00000584437 OAS2P29728 719 aaKnown RBP14.65□□□□□ -0.06
RNF43-208ENST00000584437 TSNAXIP1Q2TAA8 658 aa14.65□□□□□ -0.06
RNF43-208ENST00000584437 ANO1Q5XXA6 986 aa14.65□□□□□ -0.06
RNF43-208ENST00000584437 LMBRD1Q9NUN5 540 aa14.65□□□□□ -0.06
RNF43-208ENST00000584437 NUTM2BA6NNL0 878 aaPredicted RBP14.65□□□□□ -0.06
RNF43-208ENST00000584437 NUTM2EB1AL46 878 aaPredicted RBP14.65□□□□□ -0.06
RNF43-208ENST00000584437 FYB2Q5VWT5 728 aa14.65□□□□□ -0.06
RNF43-208ENST00000584437 NAA16Q6N069 864 aaPredicted RBP14.65□□□□□ -0.06
RNF43-208ENST00000584437 COPS6Q7L5N1 327 aa14.65□□□□□ -0.06
RNF43-208ENST00000584437 ZRANB1Q9UGI0 708 aa14.65□□□□□ -0.06
RNF43-208ENST00000584437 MSANTD4Q8NCY6 345 aa14.65□□□□□ -0.06
RNF43-208ENST00000584437 NAP1L4Q99733 375 aaKnown RBP14.65□□□□□ -0.06
RNF43-208ENST00000584437 NOC4LQ9BVI4 516 aaKnown RBP14.65□□□□□ -0.06
RNF43-208ENST00000584437 ABCA10Q8WWZ4 1543 aa14.65□□□□□ -0.06
RNF43-208ENST00000584437 BUB1BO60566 1050 aaPredicted RBP14.65□□□□□ -0.06
RNF43-208ENST00000584437 NLRP12P59046 1061 aa14.65□□□□□ -0.06
RNF43-208ENST00000584437 NEDD9Q14511 834 aa14.65□□□□□ -0.06
RNF43-208ENST00000584437 RPGRIP1Q96KN7 1286 aa14.65□□□□□ -0.06
RNF43-208ENST00000584437 TXNDC16Q9P2K2 825 aa14.65□□□□□ -0.06
RNF43-208ENST00000584437 AMOTL2Q9Y2J4 779 aa14.65□□□□□ -0.06
RNF43-208ENST00000584437 C6orf229H3BNL8 230 aa14.64□□□□□ -0.07
RNF43-208ENST00000584437 FAM13AO94988 1023 aa14.64□□□□□ -0.07
RNF43-208ENST00000584437 IDI1Q13907 227 aa14.64□□□□□ -0.07
RNF43-208ENST00000584437 APBB1IPQ7Z5R6 666 aaPredicted RBP14.64□□□□□ -0.07
RNF43-208ENST00000584437 RRP36Q96EU6 259 aaKnown RBP14.64□□□□□ -0.07
RNF43-208ENST00000584437 KCNH3Q9ULD8 1083 aa14.64□□□□□ -0.07
RNF43-208ENST00000584437 MCM7P33993 719 aa14.64□□□□□ -0.07
RNF43-208ENST00000584437 CCT6AP40227 531 aaKnown RBP14.64□□□□□ -0.07
RNF43-208ENST00000584437 PAK2Q13177 524 aa14.64□□□□□ -0.07
RNF43-208ENST00000584437 BRD3Q15059 726 aa14.64□□□□□ -0.07
RNF43-208ENST00000584437 CABS1Q96KC9 395 aa14.64□□□□□ -0.07
RNF43-208ENST00000584437 ZBTB7BO15156 539 aaPredicted RBP14.64□□□□□ -0.07
RNF43-208ENST00000584437 CUTAO60888 179 aa14.64□□□□□ -0.07
RNF43-208ENST00000584437 TSKSQ9UJT2 592 aa14.64□□□□□ -0.07
RNF43-208ENST00000584437 ACEP12821 1306 aa14.64□□□□□ -0.07
RNF43-208ENST00000584437 SECISBP2LQ93073 1101 aaKnown RBP14.64□□□□□ -0.07
RNF43-208ENST00000584437 PA2G4Q9UQ80 394 aaKnown RBP14.64□□□□□ -0.07
RNF43-208ENST00000584437 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.64□□□□□ -0.07
RNF43-208ENST00000584437 SARNPP82979 210 aaKnown RBP14.63□□□□□ -0.07
RNF43-208ENST00000584437 NOX5Q96PH1 765 aa14.63□□□□□ -0.07
RNF43-208ENST00000584437 BCL2L12Q9HB09 334 aa14.63□□□□□ -0.07
RNF43-208ENST00000584437 UTP11Q9Y3A2 253 aaKnown RBP14.63□□□□□ -0.07
RNF43-208ENST00000584437 GJC1P36383 396 aa14.63□□□□□ -0.07
RNF43-208ENST00000584437 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.63□□□□□ -0.07
RNF43-208ENST00000584437 JARID2Q92833 1246 aaPredicted RBP14.63□□□□□ -0.07
RNF43-208ENST00000584437 CTNND2Q9UQB3 1225 aa14.63□□□□□ -0.07
RNF43-208ENST00000584437 MAGEB6P1A0A0J9YX57 407 aa14.63□□□□□ -0.07
RNF43-208ENST00000584437 PSMC4P43686 418 aa14.63□□□□□ -0.07
RNF43-208ENST00000584437 CFAP157Q5JU67 520 aa14.63□□□□□ -0.07
RNF43-208ENST00000584437 TAOK1Q7L7X3 1001 aa14.63□□□□□ -0.07
RNF43-208ENST00000584437 CCDC65Q8IXS2 484 aa14.63□□□□□ -0.07
RNF43-208ENST00000584437 LEO1Q8WVC0 666 aaPredicted RBP14.63□□□□□ -0.07
RNF43-208ENST00000584437 VCX3BQ9H321 246 aa14.63□□□□□ -0.07
RNF43-208ENST00000584437 HMGXB3Q12766 1538 aa14.63□□□□□ -0.07
RNF43-208ENST00000584437 CLUL1Q15846 466 aa14.63□□□□□ -0.07
RNF43-208ENST00000584437 CCDC14Q49A88 953 aa14.63□□□□□ -0.07
RNF43-208ENST00000584437 SV2BQ7L1I2 683 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms