RNA–Protein interactions for RNA: ENST00000583066.5

NDEL1-216, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 5

Gene NDEL1, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-216ENST00000583066 GAS2L2Q8NHY3 880 aa8.14□□□□□ -1.11
NDEL1-216ENST00000583066 ZNF333Q96JL9 665 aa8.14□□□□□ -1.11
NDEL1-216ENST00000583066 GGA3Q9NZ52 723 aa8.14□□□□□ -1.11
NDEL1-216ENST00000583066 NIP7Q9Y221 180 aaKnown RBP eCLIP8.14□□□□□ -1.11
NDEL1-216ENST00000583066 LAS1LQ9Y4W2 734 aaKnown RBP8.14□□□□□ -1.11
NDEL1-216ENST00000583066 ZSWIM8A7E2V4 1837 aa8.14□□□□□ -1.11
NDEL1-216ENST00000583066 PRAMEF22A3QJZ6 481 aa8.13□□□□□ -1.11
NDEL1-216ENST00000583066 WTIPA6NIX2 430 aaPredicted RBP8.13□□□□□ -1.11
NDEL1-216ENST00000583066 BHMG1C9JSJ3 638 aaPredicted RBP8.13□□□□□ -1.11
NDEL1-216ENST00000583066 UBE2Q2LH0YL09 131 aa8.13□□□□□ -1.11
NDEL1-216ENST00000583066 H7C1D1 291 aa8.13□□□□□ -1.11
NDEL1-216ENST00000583066 PRKCSHP14314 528 aaPredicted RBP8.13□□□□□ -1.11
NDEL1-216ENST00000583066 SULT6B1Q6IMI4 303 aa8.13□□□□□ -1.11
NDEL1-216ENST00000583066 TPTE2Q6XPS3 522 aa8.13□□□□□ -1.11
NDEL1-216ENST00000583066 RPAP2Q8IXW5 612 aaPredicted RBP8.13□□□□□ -1.11
NDEL1-216ENST00000583066 DEFB123Q8N688 67 aa8.13□□□□□ -1.11
NDEL1-216ENST00000583066 CD99L2Q8TCZ2 262 aa8.13□□□□□ -1.11
NDEL1-216ENST00000583066 DCPSQ96C86 337 aaKnown RBP8.13□□□□□ -1.11
NDEL1-216ENST00000583066 CFHR5Q9BXR6 569 aa8.13□□□□□ -1.11
NDEL1-216ENST00000583066 SCAF8Q9UPN6 1271 aaKnown RBP8.13□□□□□ -1.11
NDEL1-216ENST00000583066 TNNQ9UQP3 1299 aa8.13□□□□□ -1.11
NDEL1-216ENST00000583066 STXBP5LQ9Y2K9 1186 aa8.13□□□□□ -1.11
NDEL1-216ENST00000583066 SCN9AQ15858 1988 aa8.13□□□□□ -1.11
NDEL1-216ENST00000583066 TAF1P21675 1872 aa8.13□□□□□ -1.11
NDEL1-216ENST00000583066 EYSQ5T1H1 3165 aa8.12□□□□□ -1.11
NDEL1-216ENST00000583066 HOXA10P31260 410 aaPredicted RBP8.12□□□□□ -1.11
NDEL1-216ENST00000583066 IL27Q8NEV9 243 aa8.12□□□□□ -1.11
NDEL1-216ENST00000583066 RTF1Q92541 710 aaKnown RBP8.12□□□□□ -1.11
NDEL1-216ENST00000583066 DPF3Q92784 378 aa8.12□□□□□ -1.11
NDEL1-216ENST00000583066 SHISA4Q96DD7 197 aa8.12□□□□□ -1.11
NDEL1-216ENST00000583066 PLA2G2EQ9NZK7 142 aa8.12□□□□□ -1.11
NDEL1-216ENST00000583066 LAMB1P07942 1786 aa8.12□□□□□ -1.11
NDEL1-216ENST00000583066 LAMB2P55268 1798 aa8.12□□□□□ -1.11
NDEL1-216ENST00000583066 NUP98P52948 1817 aa8.11□□□□□ -1.11
NDEL1-216ENST00000583066 PSMD14O00487 310 aa8.11□□□□□ -1.11
NDEL1-216ENST00000583066 RBM25P49756 843 aaKnown RBP8.11□□□□□ -1.11
NDEL1-216ENST00000583066 TNIP1Q15025 636 aa8.11□□□□□ -1.11
NDEL1-216ENST00000583066 NFKBIBQ15653 356 aa8.11□□□□□ -1.11
NDEL1-216ENST00000583066 SULF1Q8IWU6 871 aa8.11□□□□□ -1.11
NDEL1-216ENST00000583066 C8orf58Q8NAV2 365 aa8.11□□□□□ -1.11
NDEL1-216ENST00000583066 RPGRQ92834 1020 aaKnown RBP8.11□□□□□ -1.11
NDEL1-216ENST00000583066 C22orf23Q9BZE7 217 aa8.11□□□□□ -1.11
NDEL1-216ENST00000583066 ALPK3Q96L96 1907 aa8.11□□□□□ -1.11
NDEL1-216ENST00000583066 TRIM6-TRIM34B2RNG4 842 aa8.1□□□□□ -1.11
NDEL1-216ENST00000583066 PLA2G5P39877 138 aa8.1□□□□□ -1.11
NDEL1-216ENST00000583066 CCT4P50991 539 aaKnown RBP8.1□□□□□ -1.11
NDEL1-216ENST00000583066 KIAA2012Q0VF49 1180 aa8.1□□□□□ -1.11
NDEL1-216ENST00000583066 PTGDRQ13258 359 aa8.1□□□□□ -1.11
NDEL1-216ENST00000583066 HLFQ16534 295 aa8.1□□□□□ -1.11
NDEL1-216ENST00000583066 KIF4BQ2VIQ3 1234 aa8.1□□□□□ -1.11
NDEL1-216ENST00000583066 SLC4A8Q2Y0W8 1093 aa8.1□□□□□ -1.11
NDEL1-216ENST00000583066 PRAMEF18Q5VWM3 479 aa8.1□□□□□ -1.11
NDEL1-216ENST00000583066 CLEC4GQ6UXB4 293 aa8.1□□□□□ -1.11
NDEL1-216ENST00000583066 TTC5Q8N0Z6 440 aa8.1□□□□□ -1.11
NDEL1-216ENST00000583066 SNX21Q969T3 373 aa8.1□□□□□ -1.11
NDEL1-216ENST00000583066 RTFDC1Q9BY42 306 aaPredicted RBP8.1□□□□□ -1.11
NDEL1-216ENST00000583066 DCTPP1Q9H773 170 aa8.1□□□□□ -1.11
NDEL1-216ENST00000583066 MTMR10Q9NXD2 777 aa8.1□□□□□ -1.11
NDEL1-216ENST00000583066 FAM198AQ9UFP1 575 aa8.1□□□□□ -1.11
NDEL1-216ENST00000583066 PRUNE2Q8WUY3 3088 aa8.1□□□□□ -1.11
NDEL1-216ENST00000583066 RTL9Q8NET4 1388 aa8.1□□□□□ -1.11
NDEL1-216ENST00000583066 DDX60Q8IY21 1712 aaKnown RBP8.09□□□□□ -1.11
NDEL1-216ENST00000583066 KCNQ3O43525 872 aa8.09□□□□□ -1.11
NDEL1-216ENST00000583066 HMMRO75330 724 aa8.09□□□□□ -1.11
NDEL1-216ENST00000583066 GTF2E1P29083 439 aaPredicted RBP8.09□□□□□ -1.11
NDEL1-216ENST00000583066 PRSS12P56730 875 aa8.09□□□□□ -1.11
NDEL1-216ENST00000583066 GRIPAP1Q4V328 841 aa8.09□□□□□ -1.11
NDEL1-216ENST00000583066 ANGEL2Q5VTE6 544 aaKnown RBP8.09□□□□□ -1.11
NDEL1-216ENST00000583066 TSPYL6Q8N831 410 aa8.09□□□□□ -1.11
NDEL1-216ENST00000583066 ANKRD44Q8N8A2 993 aa8.09□□□□□ -1.11
NDEL1-216ENST00000583066 KCNQ5Q9NR82 932 aa8.09□□□□□ -1.11
NDEL1-216ENST00000583066 RABGEF1Q9UJ41 708 aa8.09□□□□□ -1.11
NDEL1-216ENST00000583066 ZNF652Q9Y2D9 606 aa8.09□□□□□ -1.11
NDEL1-216ENST00000583066 ATP6V0A2Q9Y487 856 aa8.09□□□□□ -1.11
NDEL1-216ENST00000583066 PTCH2Q9Y6C5 1203 aa8.09□□□□□ -1.11
NDEL1-216ENST00000583066 LAMA2P24043 3122 aaKnown RBP8.09□□□□□ -1.11
NDEL1-216ENST00000583066 LRRC37AA6NMS7 1700 aa8.09□□□□□ -1.11
NDEL1-216ENST00000583066 MUC3AQ02505 3323 aa8.08□□□□□ -1.12
NDEL1-216ENST00000583066 A0A1W2PPC1 479 aa8.08□□□□□ -1.12
NDEL1-216ENST00000583066 GPR37O15354 613 aa8.08□□□□□ -1.12
NDEL1-216ENST00000583066 PTMSP20962 102 aa8.08□□□□□ -1.12
NDEL1-216ENST00000583066 FKBP1BP68106 108 aa8.08□□□□□ -1.12
NDEL1-216ENST00000583066 SREBF2Q12772 1141 aa8.08□□□□□ -1.12
NDEL1-216ENST00000583066 ANKRD45Q5TZF3 282 aa8.08□□□□□ -1.12
NDEL1-216ENST00000583066 ZNF790Q6PG37 636 aa8.08□□□□□ -1.12
NDEL1-216ENST00000583066 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.08□□□□□ -1.12
NDEL1-216ENST00000583066 TTC13Q8NBP0 860 aa8.08□□□□□ -1.12
NDEL1-216ENST00000583066 DPF2Q92785 391 aa8.08□□□□□ -1.12
NDEL1-216ENST00000583066 CRAMP1Q96RY5 1269 aa8.08□□□□□ -1.12
NDEL1-216ENST00000583066 THUMPD2Q9BTF0 503 aaKnown RBP8.08□□□□□ -1.12
NDEL1-216ENST00000583066 VPS33BQ9H267 617 aa8.08□□□□□ -1.12
NDEL1-216ENST00000583066 EFCC1Q9HA90 598 aa8.08□□□□□ -1.12
NDEL1-216ENST00000583066 KIAA1468Q9P260 1216 aa8.08□□□□□ -1.12
NDEL1-216ENST00000583066 ZNF646O15015 1829 aaPredicted RBP8.08□□□□□ -1.12
NDEL1-216ENST00000583066 GNAT3A8MTJ3 354 aa8.07□□□□□ -1.12
NDEL1-216ENST00000583066 NBPF26B4DH59 902 aa8.07□□□□□ -1.12
NDEL1-216ENST00000583066 C3orf80F5H4A9 247 aa8.07□□□□□ -1.12
NDEL1-216ENST00000583066 IGF2BP3O00425 579 aaKnown RBP eCLIP8.07□□□□□ -1.12
NDEL1-216ENST00000583066 HOXB7P09629 217 aa8.07□□□□□ -1.12
NDEL1-216ENST00000583066 SLC9C1Q4G0N8 1177 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms