RNA–Protein interactions for RNA: ENST00000582892.1

NF1-222, Transcript of neurofibromin 1, humanhuman

TSL 4

Gene NF1, Length 462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-222ENST00000582892 B4GALNT3Q6L9W6 998 aa9.48□□□□□ -0.89
NF1-222ENST00000582892 CCDC136Q96JN2 1154 aa9.48□□□□□ -0.89
NF1-222ENST00000582892 TSR3Q9UJK0 312 aaKnown RBP9.48□□□□□ -0.89
NF1-222ENST00000582892 FZD1Q9UP38 647 aa9.48□□□□□ -0.89
NF1-222ENST00000582892 LAMB1P07942 1786 aa9.47□□□□□ -0.89
NF1-222ENST00000582892 RCCD1A6NED2 376 aa9.47□□□□□ -0.89
NF1-222ENST00000582892 ERVV-1B6SEH8 477 aa9.47□□□□□ -0.89
NF1-222ENST00000582892 MYCP01106 439 aaPredicted RBP9.47□□□□□ -0.89
NF1-222ENST00000582892 PPP2R1AP30153 589 aa9.47□□□□□ -0.89
NF1-222ENST00000582892 PPP4CP60510 307 aa9.47□□□□□ -0.89
NF1-222ENST00000582892 CNGB1Q14028 1251 aaPredicted RBP9.47□□□□□ -0.89
NF1-222ENST00000582892 NOM1Q5C9Z4 860 aaKnown RBP9.47□□□□□ -0.89
NF1-222ENST00000582892 NLRP3Q96P20 1036 aa9.47□□□□□ -0.89
NF1-222ENST00000582892 TMEM134Q9H6X4 195 aa9.47□□□□□ -0.89
NF1-222ENST00000582892 POLLQ9UGP5 575 aa9.47□□□□□ -0.89
NF1-222ENST00000582892 LAMA2P24043 3122 aaKnown RBP9.47□□□□□ -0.89
NF1-222ENST00000582892 C3orf80F5H4A9 247 aa9.46□□□□□ -0.9
NF1-222ENST00000582892 SOX1O00570 391 aaPredicted RBP9.46□□□□□ -0.9
NF1-222ENST00000582892 PRKAR2BP31323 418 aa9.46□□□□□ -0.9
NF1-222ENST00000582892 PTPN5P54829 565 aa9.46□□□□□ -0.9
NF1-222ENST00000582892 PRKG1Q13976 671 aa9.46□□□□□ -0.9
NF1-222ENST00000582892 CC2D1BQ5T0F9 858 aaKnown RBP9.46□□□□□ -0.9
NF1-222ENST00000582892 KIF6Q6ZMV9 814 aa9.46□□□□□ -0.9
NF1-222ENST00000582892 CD99L2Q8TCZ2 262 aa9.46□□□□□ -0.9
NF1-222ENST00000582892 THUMPD2Q9BTF0 503 aaKnown RBP9.46□□□□□ -0.9
NF1-222ENST00000582892 TMX4Q9H1E5 349 aaPredicted RBP9.46□□□□□ -0.9
NF1-222ENST00000582892 ZNF609O15014 1411 aa9.46□□□□□ -0.9
NF1-222ENST00000582892 RNF40O75150 1001 aa9.45□□□□□ -0.9
NF1-222ENST00000582892 BBOX1O75936 387 aa9.45□□□□□ -0.9
NF1-222ENST00000582892 RPS12P25398 132 aaKnown RBP9.45□□□□□ -0.9
NF1-222ENST00000582892 BCAMP50895 628 aa9.45□□□□□ -0.9
NF1-222ENST00000582892 GPSM2P81274 684 aa9.45□□□□□ -0.9
NF1-222ENST00000582892 PTPN12Q05209 780 aaKnown RBP9.45□□□□□ -0.9
NF1-222ENST00000582892 GRAPQ13588 217 aa9.45□□□□□ -0.9
NF1-222ENST00000582892 TTLL12Q14166 644 aaPredicted RBP9.45□□□□□ -0.9
NF1-222ENST00000582892 WASHC4Q2M389 1173 aa9.45□□□□□ -0.9
NF1-222ENST00000582892 SLC10A5Q5PT55 438 aa9.45□□□□□ -0.9
NF1-222ENST00000582892 SWT1Q5T5J6 900 aaKnown RBP9.45□□□□□ -0.9
NF1-222ENST00000582892 GIGYF2Q6Y7W6 1299 aaKnown RBP9.45□□□□□ -0.9
NF1-222ENST00000582892 GRAPLQ8TC17 118 aaPredicted RBP9.45□□□□□ -0.9
NF1-222ENST00000582892 ARMC5Q96C12 935 aa9.45□□□□□ -0.9
NF1-222ENST00000582892 PRR14Q9BWN1 585 aa9.45□□□□□ -0.9
NF1-222ENST00000582892 PTPN22Q9Y2R2 807 aa9.45□□□□□ -0.9
NF1-222ENST00000582892 ZNF521Q96K83 1311 aa9.45□□□□□ -0.9
NF1-222ENST00000582892 PRUNE2Q8WUY3 3088 aa9.45□□□□□ -0.9
NF1-222ENST00000582892 MUC3AQ02505 3323 aa9.44□□□□□ -0.9
NF1-222ENST00000582892 C6orf229H3BNL8 230 aa9.44□□□□□ -0.9
NF1-222ENST00000582892 IGF2BP3O00425 579 aaKnown RBP eCLIP9.44□□□□□ -0.9
NF1-222ENST00000582892 ANXA1P04083 346 aa9.44□□□□□ -0.9
NF1-222ENST00000582892 FKBP1BP68106 108 aa9.44□□□□□ -0.9
NF1-222ENST00000582892 WDR43Q15061 677 aaKnown RBP eCLIP9.44□□□□□ -0.9
NF1-222ENST00000582892 INTS3Q68E01 1043 aaKnown RBP9.44□□□□□ -0.9
NF1-222ENST00000582892 CELF1Q92879 486 aaKnown RBP9.44□□□□□ -0.9
NF1-222ENST00000582892 UTP14AQ9BVJ6 771 aaKnown RBP9.44□□□□□ -0.9
NF1-222ENST00000582892 CFHR5Q9BXR6 569 aa9.44□□□□□ -0.9
NF1-222ENST00000582892 RSPH6AQ9H0K4 717 aa9.44□□□□□ -0.9
NF1-222ENST00000582892 NSFL1CQ9UNZ2 370 aaKnown RBP9.44□□□□□ -0.9
NF1-222ENST00000582892 OTOFQ9HC10 1997 aa9.43□□□□□ -0.9
NF1-222ENST00000582892 VIL1P09327 827 aaKnown RBP9.43□□□□□ -0.9
NF1-222ENST00000582892 MS4A1P11836 297 aa9.43□□□□□ -0.9
NF1-222ENST00000582892 ZNF280AP59817 542 aaPredicted RBP9.43□□□□□ -0.9
NF1-222ENST00000582892 PROSER3Q2NL68 480 aa9.43□□□□□ -0.9
NF1-222ENST00000582892 NBPF9Q3BBW0 867 aa9.43□□□□□ -0.9
NF1-222ENST00000582892 DDX46Q7L014 1031 aaKnown RBP9.43□□□□□ -0.9
NF1-222ENST00000582892 LRP10Q7Z4F1 713 aa9.43□□□□□ -0.9
NF1-222ENST00000582892 PPP1R42Q7Z4L9 355 aa9.43□□□□□ -0.9
NF1-222ENST00000582892 ZNF333Q96JL9 665 aa9.43□□□□□ -0.9
NF1-222ENST00000582892 WTIPA6NIX2 430 aaPredicted RBP9.42□□□□□ -0.9
NF1-222ENST00000582892 SREBF2Q12772 1141 aa9.42□□□□□ -0.9
NF1-222ENST00000582892 SPRYD7Q5W111 196 aa9.42□□□□□ -0.9
NF1-222ENST00000582892 CLMNQ96JQ2 1002 aa9.42□□□□□ -0.9
NF1-222ENST00000582892 MXD3Q9BW11 206 aa9.42□□□□□ -0.9
NF1-222ENST00000582892 PRO3102Q9H379 93 aa9.42□□□□□ -0.9
NF1-222ENST00000582892 DAXXQ9UER7 740 aaPredicted RBP9.42□□□□□ -0.9
NF1-222ENST00000582892 ADAMTS8Q9UP79 889 aa9.42□□□□□ -0.9
NF1-222ENST00000582892 TTC28Q96AY4 2481 aa9.42□□□□□ -0.9
NF1-222ENST00000582892 SSC5DA1L4H1 1573 aa9.41□□□□□ -0.9
NF1-222ENST00000582892 ALPK3Q96L96 1907 aa9.41□□□□□ -0.9
NF1-222ENST00000582892 SPEF2Q9C093 1822 aa9.41□□□□□ -0.9
NF1-222ENST00000582892 CRHR2Q13324 411 aa9.41□□□□□ -0.9
NF1-222ENST00000582892 PARP10Q53GL7 1025 aa9.41□□□□□ -0.9
NF1-222ENST00000582892 NLRP10Q86W26 655 aa9.41□□□□□ -0.9
NF1-222ENST00000582892 TRMT2AQ8IZ69 625 aaKnown RBP9.41□□□□□ -0.9
NF1-222ENST00000582892 TBC1D16Q8TBP0 767 aa9.41□□□□□ -0.9
NF1-222ENST00000582892 GMLQ99445 158 aa9.41□□□□□ -0.9
NF1-222ENST00000582892 MYOZ2Q9NPC6 264 aa9.41□□□□□ -0.9
NF1-222ENST00000582892 PTCH2Q9Y6C5 1203 aa9.41□□□□□ -0.9
NF1-222ENST00000582892 CDH23Q9H251 3354 aa9.4□□□□□ -0.9
NF1-222ENST00000582892 SASH1O94885 1247 aa9.4□□□□□ -0.9
NF1-222ENST00000582892 EIF4A1P60842 406 aaKnown RBP9.4□□□□□ -0.9
NF1-222ENST00000582892 TAF7Q15545 349 aaPredicted RBP9.4□□□□□ -0.9
NF1-222ENST00000582892 RSBN1LQ6PCB5 846 aaPredicted RBP9.4□□□□□ -0.9
NF1-222ENST00000582892 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.4□□□□□ -0.9
NF1-222ENST00000582892 SH3TC2Q8TF17 1288 aa9.4□□□□□ -0.9
NF1-222ENST00000582892 RTF1Q92541 710 aaKnown RBP9.4□□□□□ -0.9
NF1-222ENST00000582892 SHISA4Q96DD7 197 aa9.4□□□□□ -0.9
NF1-222ENST00000582892 EFCC1Q9HA90 598 aa9.4□□□□□ -0.9
NF1-222ENST00000582892 PITPNM2Q9BZ72 1349 aa9.39□□□□□ -0.91
NF1-222ENST00000582892 CLCN1P35523 988 aa9.39□□□□□ -0.91
NF1-222ENST00000582892 GJA5P36382 358 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms