RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 CAVIN1Q6NZI2 390 aaKnown RBP26.75■■□□□ 1.87
CCDC47-204ENST00000582252 GRAPLQ8TC17 118 aaPredicted RBP26.75■■□□□ 1.87
CCDC47-204ENST00000582252 VPS37CA5D8V6 355 aaPredicted RBP26.74■■□□□ 1.87
CCDC47-204ENST00000582252 PFKFB2O60825 505 aa26.74■■□□□ 1.87
CCDC47-204ENST00000582252 PDE6BP35913 854 aa26.74■■□□□ 1.87
CCDC47-204ENST00000582252 AIDAQ96BJ3 306 aa26.74■■□□□ 1.87
CCDC47-204ENST00000582252 RBM17Q96I25 401 aaKnown RBP26.74■■□□□ 1.87
CCDC47-204ENST00000582252 KIF3AQ9Y496 699 aa26.74■■□□□ 1.87
CCDC47-204ENST00000582252 COL11A2P13942 1736 aaPredicted RBP26.74■■□□□ 1.87
CCDC47-204ENST00000582252 WDR19Q8NEZ3 1342 aa26.74■■□□□ 1.87
CCDC47-204ENST00000582252 TCRBV5S4A2TA0A5A2 114 aa26.73■■□□□ 1.87
CCDC47-204ENST00000582252 FOXP2O15409 715 aa26.73■■□□□ 1.87
CCDC47-204ENST00000582252 HOXA10P31260 410 aaPredicted RBP26.73■■□□□ 1.87
CCDC47-204ENST00000582252 TTLL5Q6EMB2 1281 aa26.73■■□□□ 1.87
CCDC47-204ENST00000582252 NCOA7Q8NI08 942 aa26.73■■□□□ 1.87
CCDC47-204ENST00000582252 SYAP1Q96A49 352 aaPredicted RBP26.73■■□□□ 1.87
CCDC47-204ENST00000582252 ZMYM6O95789 1325 aa26.73■■□□□ 1.87
CCDC47-204ENST00000582252 RALYLQ86SE5 291 aaKnown RBP26.73■■□□□ 1.87
CCDC47-204ENST00000582252 GPT2Q8TD30 523 aa26.73■■□□□ 1.87
CCDC47-204ENST00000582252 WWC3Q9ULE0 1092 aa26.73■■□□□ 1.87
CCDC47-204ENST00000582252 TCHHQ07283 1943 aa26.72■■□□□ 1.87
CCDC47-204ENST00000582252 BCAMP50895 628 aa26.72■■□□□ 1.87
CCDC47-204ENST00000582252 ZNF445P59923 1031 aa26.72■■□□□ 1.87
CCDC47-204ENST00000582252 CAVIN4Q5BKX8 364 aa26.72■■□□□ 1.87
CCDC47-204ENST00000582252 ZNF274Q96GC6 653 aaPredicted RBP26.72■■□□□ 1.87
CCDC47-204ENST00000582252 GRPEL1Q9HAV7 217 aa26.72■■□□□ 1.87
CCDC47-204ENST00000582252 MCM5P33992 734 aa26.71■■□□□ 1.87
CCDC47-204ENST00000582252 TRDNQ13061 729 aa26.71■■□□□ 1.87
CCDC47-204ENST00000582252 LRRC2Q9BYS8 371 aa26.71■■□□□ 1.87
CCDC47-204ENST00000582252 ZNF804BA4D1E1 1349 aa26.71■■□□□ 1.87
CCDC47-204ENST00000582252 HMGN5P82970 282 aaKnown RBP26.7■■□□□ 1.87
CCDC47-204ENST00000582252 ALX1Q15699 326 aa26.7■■□□□ 1.87
CCDC47-204ENST00000582252 MAGEB6Q8N7X4 407 aa26.7■■□□□ 1.87
CCDC47-204ENST00000582252 CRAMP1Q96RY5 1269 aa26.7■■□□□ 1.87
CCDC47-204ENST00000582252 ANKRD2Q9GZV1 360 aa26.7■■□□□ 1.87
CCDC47-204ENST00000582252 SNAP23O00161 211 aa26.7■■□□□ 1.86
CCDC47-204ENST00000582252 APPP05067 770 aa26.7■■□□□ 1.86
CCDC47-204ENST00000582252 GNAT2P19087 354 aa26.7■■□□□ 1.86
CCDC47-204ENST00000582252 CHAMP1Q96JM3 812 aa26.7■■□□□ 1.86
CCDC47-204ENST00000582252 MINPP1Q9UNW1 487 aa26.7■■□□□ 1.86
CCDC47-204ENST00000582252 HAND2P61296 217 aa26.69■■□□□ 1.86
CCDC47-204ENST00000582252 ZSCAN23Q3MJ62 389 aa26.69■■□□□ 1.86
CCDC47-204ENST00000582252 USP48Q86UV5 1035 aa26.69■■□□□ 1.86
CCDC47-204ENST00000582252 STRBPQ96SI9 672 aaKnown RBP26.69■■□□□ 1.86
CCDC47-204ENST00000582252 A0A0G2JLW4 131 aa26.68■■□□□ 1.86
CCDC47-204ENST00000582252 SRGNP10124 158 aa26.68■■□□□ 1.86
CCDC47-204ENST00000582252 NPR1P16066 1061 aa26.68■■□□□ 1.86
CCDC47-204ENST00000582252 APOBRQ0VD83 1088 aa26.68■■□□□ 1.86
CCDC47-204ENST00000582252 SCRN1Q12765 414 aa26.68■■□□□ 1.86
CCDC47-204ENST00000582252 R3HDM1Q15032 1099 aaKnown RBP26.68■■□□□ 1.86
CCDC47-204ENST00000582252 FOXD4L6Q3SYB3 417 aaPredicted RBP26.68■■□□□ 1.86
CCDC47-204ENST00000582252 FOXD4L3Q6VB84 417 aaPredicted RBP26.68■■□□□ 1.86
CCDC47-204ENST00000582252 FAM184AQ8NB25 1140 aa26.68■■□□□ 1.86
CCDC47-204ENST00000582252 XRCC6P12956 609 aaKnown RBP eCLIP26.68■■□□□ 1.86
CCDC47-204ENST00000582252 MTFR1LQ9H019 292 aa26.68■■□□□ 1.86
CCDC47-204ENST00000582252 LRP2BPQ9P2M1 347 aa26.68■■□□□ 1.86
CCDC47-204ENST00000582252 CACNA1SQ13698 1873 aa26.67■■□□□ 1.86
CCDC47-204ENST00000582252 PATL2C9JE40 543 aaKnown RBP26.67■■□□□ 1.86
CCDC47-204ENST00000582252 BBOX1O75936 387 aa26.67■■□□□ 1.86
CCDC47-204ENST00000582252 EVCP57679 992 aa26.67■■□□□ 1.86
CCDC47-204ENST00000582252 VPS37DQ86XT2 251 aa26.67■■□□□ 1.86
CCDC47-204ENST00000582252 MB21D2Q8IYB1 491 aaPredicted RBP26.67■■□□□ 1.86
CCDC47-204ENST00000582252 SMARCC2Q8TAQ2 1214 aa26.67■■□□□ 1.86
CCDC47-204ENST00000582252 DENND2AQ9ULE3 1009 aa26.67■■□□□ 1.86
CCDC47-204ENST00000582252 CNPY2Q9Y2B0 182 aa26.67■■□□□ 1.86
CCDC47-204ENST00000582252 KIF13BQ9NQT8 1826 aa26.67■■□□□ 1.86
CCDC47-204ENST00000582252 C10orf71Q711Q0 1435 aa26.66■■□□□ 1.86
CCDC47-204ENST00000582252 SEMA3EO15041 775 aa26.66■■□□□ 1.86
CCDC47-204ENST00000582252 PRC1O43663 620 aa26.66■■□□□ 1.86
CCDC47-204ENST00000582252 TMC4Q7Z404 712 aa26.66■■□□□ 1.86
CCDC47-204ENST00000582252 LRRC37AA6NMS7 1700 aa26.66■■□□□ 1.86
CCDC47-204ENST00000582252 UBE2HP62256 183 aa26.65■■□□□ 1.86
CCDC47-204ENST00000582252 MASTLQ96GX5 879 aa26.65■■□□□ 1.86
CCDC47-204ENST00000582252 NACAP1Q9BZK3 213 aa26.65■■□□□ 1.86
CCDC47-204ENST00000582252 CHD4Q14839 1912 aa26.65■■□□□ 1.86
CCDC47-204ENST00000582252 MYH13Q9UKX3 1938 aa26.65■■□□□ 1.86
CCDC47-204ENST00000582252 MBD4O95243 580 aa26.65■■□□□ 1.86
CCDC47-204ENST00000582252 KRT85P78386 507 aa26.65■■□□□ 1.86
CCDC47-204ENST00000582252 DLEC1Q9Y238 1755 aa26.64■■□□□ 1.86
CCDC47-204ENST00000582252 DHX16O60231 1041 aaKnown RBP26.64■■□□□ 1.85
CCDC47-204ENST00000582252 ZBTB7AO95365 584 aa26.64■■□□□ 1.85
CCDC47-204ENST00000582252 CDC37L1Q7L3B6 337 aa26.64■■□□□ 1.85
CCDC47-204ENST00000582252 NAPBQ9H115 298 aa26.64■■□□□ 1.85
CCDC47-204ENST00000582252 NAP1L2Q9ULW6 460 aaPredicted RBP26.64■■□□□ 1.85
CCDC47-204ENST00000582252 H0YIN7 160 aa26.63■■□□□ 1.85
CCDC47-204ENST00000582252 H3BQV1 296 aa26.63■■□□□ 1.85
CCDC47-204ENST00000582252 POLD1P28340 1107 aa26.63■■□□□ 1.85
CCDC47-204ENST00000582252 PDIA3P30101 505 aaKnown RBP26.63■■□□□ 1.85
CCDC47-204ENST00000582252 ALDH1B1P30837 517 aa26.63■■□□□ 1.85
CCDC47-204ENST00000582252 IFFO2Q5TF58 517 aa26.63■■□□□ 1.85
CCDC47-204ENST00000582252 NSUN7Q8NE18 718 aaKnown RBP26.63■■□□□ 1.85
CCDC47-204ENST00000582252 GDPD2Q9HCC8 539 aa26.63■■□□□ 1.85
CCDC47-204ENST00000582252 JAK2O60674 1132 aa26.62■■□□□ 1.85
CCDC47-204ENST00000582252 GYG1P46976 350 aa26.62■■□□□ 1.85
CCDC47-204ENST00000582252 C2CD5Q86YS7 1000 aa26.62■■□□□ 1.85
CCDC47-204ENST00000582252 PDS5AQ29RF7 1337 aaKnown RBP26.62■■□□□ 1.85
CCDC47-204ENST00000582252 TIAM2Q8IVF5 1701 aa26.62■■□□□ 1.85
CCDC47-204ENST00000582252 DNM1Q05193 864 aaKnown RBP26.62■■□□□ 1.85
CCDC47-204ENST00000582252 CHST3Q7LGC8 479 aa26.62■■□□□ 1.85
CCDC47-204ENST00000582252 GAS2L3Q86XJ1 694 aa26.62■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms