RNA–Protein interactions for RNA: ENST00000580044.5

CDH8-206, Transcript of cadherin 8, humanhuman

TSL 2

Gene CDH8, Length 778 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-206ENST00000580044 KLF15Q9UIH9 416 aa6.58□□□□□ -1.36
CDH8-206ENST00000580044 AKAP12Q02952 1782 aa6.58□□□□□ -1.36
CDH8-206ENST00000580044 CD163L1Q9NR16 1453 aa6.58□□□□□ -1.36
CDH8-206ENST00000580044 CDK12Q9NYV4 1490 aaPredicted RBP6.58□□□□□ -1.36
CDH8-206ENST00000580044 YTHDC2Q9H6S0 1430 aaKnown RBP6.58□□□□□ -1.36
CDH8-206ENST00000580044 YEATS2Q9ULM3 1422 aa6.58□□□□□ -1.36
CDH8-206ENST00000580044 RIMBP3CA6NJZ7 1639 aa6.58□□□□□ -1.36
CDH8-206ENST00000580044 RIMBP3BA6NNM3 1639 aa6.58□□□□□ -1.36
CDH8-206ENST00000580044 RIMBP3Q9UFD9 1639 aa6.58□□□□□ -1.36
CDH8-206ENST00000580044 ALKQ9UM73 1620 aa6.58□□□□□ -1.36
CDH8-206ENST00000580044 NRKQ7Z2Y5 1582 aa6.57□□□□□ -1.36
CDH8-206ENST00000580044 GOLGA6L22H0YM25 854 aa6.57□□□□□ -1.36
CDH8-206ENST00000580044 EML1O00423 815 aa6.57□□□□□ -1.36
CDH8-206ENST00000580044 SRPK2P78362 688 aaKnown RBP6.57□□□□□ -1.36
CDH8-206ENST00000580044 SPEM2Q0P670 501 aa6.57□□□□□ -1.36
CDH8-206ENST00000580044 CCDC102BQ68D86 513 aa6.57□□□□□ -1.36
CDH8-206ENST00000580044 CHD1LQ86WJ1 897 aa6.57□□□□□ -1.36
CDH8-206ENST00000580044 DEPDC4Q8N2C3 294 aa6.57□□□□□ -1.36
CDH8-206ENST00000580044 SSH1Q8WYL5 1049 aa6.57□□□□□ -1.36
CDH8-206ENST00000580044 TRIM11Q96F44 468 aa6.57□□□□□ -1.36
CDH8-206ENST00000580044 PNMA5Q96PV4 448 aa6.57□□□□□ -1.36
CDH8-206ENST00000580044 BCL2L13Q9BXK5 485 aa6.57□□□□□ -1.36
CDH8-206ENST00000580044 ALG2Q9H553 416 aa6.57□□□□□ -1.36
CDH8-206ENST00000580044 EFCC1Q9HA90 598 aa6.57□□□□□ -1.36
CDH8-206ENST00000580044 BRD7Q9NPI1 651 aa6.57□□□□□ -1.36
CDH8-206ENST00000580044 KCNH4Q9UQ05 1017 aa6.57□□□□□ -1.36
CDH8-206ENST00000580044 ARHGEF40Q8TER5 1519 aa6.56□□□□□ -1.36
CDH8-206ENST00000580044 PALM3A6NDB9 673 aaPredicted RBP6.56□□□□□ -1.36
CDH8-206ENST00000580044 SFI1A8K8P3 1242 aa6.56□□□□□ -1.36
CDH8-206ENST00000580044 C9orf172C9J069 976 aa6.56□□□□□ -1.36
CDH8-206ENST00000580044 U2SURPO15042 1029 aaKnown RBP6.56□□□□□ -1.36
CDH8-206ENST00000580044 LILRB5O75023 590 aa6.56□□□□□ -1.36
CDH8-206ENST00000580044 HSP90AB1P08238 724 aaKnown RBP6.56□□□□□ -1.36
CDH8-206ENST00000580044 DDIT3P35638 169 aa6.56□□□□□ -1.36
CDH8-206ENST00000580044 ADH7P40394 386 aa6.56□□□□□ -1.36
CDH8-206ENST00000580044 RIPK4P57078 832 aa6.56□□□□□ -1.36
CDH8-206ENST00000580044 RAC1P63000 192 aa6.56□□□□□ -1.36
CDH8-206ENST00000580044 TBC1D8BQ0IIM8 1120 aa6.56□□□□□ -1.36
CDH8-206ENST00000580044 GLIPR1L2Q4G1C9 344 aa6.56□□□□□ -1.36
CDH8-206ENST00000580044 TMEM132EQ6IEE7 984 aa6.56□□□□□ -1.36
CDH8-206ENST00000580044 TNFRSF25Q93038 417 aa6.56□□□□□ -1.36
CDH8-206ENST00000580044 TSR2Q969E8 191 aaKnown RBP6.56□□□□□ -1.36
CDH8-206ENST00000580044 PRDM6Q9NQX0 595 aa6.56□□□□□ -1.36
CDH8-206ENST00000580044 STRN4Q9NRL3 753 aa6.56□□□□□ -1.36
CDH8-206ENST00000580044 NOB1Q9ULX3 412 aaKnown RBP6.56□□□□□ -1.36
CDH8-206ENST00000580044 USP3Q9Y6I4 520 aa6.56□□□□□ -1.36
CDH8-206ENST00000580044 N4BP2Q86UW6 1770 aaPredicted RBP6.55□□□□□ -1.36
CDH8-206ENST00000580044 PPP1R12BO60237 982 aaPredicted RBP6.55□□□□□ -1.36
CDH8-206ENST00000580044 GNAI1P63096 354 aa6.55□□□□□ -1.36
CDH8-206ENST00000580044 SFSWAPQ12872 951 aaKnown RBP6.55□□□□□ -1.36
CDH8-206ENST00000580044 PCSK7Q16549 785 aa6.55□□□□□ -1.36
CDH8-206ENST00000580044 TBCELQ5QJ74 424 aa6.55□□□□□ -1.36
CDH8-206ENST00000580044 GGT6Q6P531 493 aa6.55□□□□□ -1.36
CDH8-206ENST00000580044 ZNF295-AS1Q8N0V1 137 aa6.55□□□□□ -1.36
CDH8-206ENST00000580044 LARGE2Q8N3Y3 721 aa6.55□□□□□ -1.36
CDH8-206ENST00000580044 TMEM57Q8N5G2 664 aa6.55□□□□□ -1.36
CDH8-206ENST00000580044 ZDHHC1Q8WTX9 485 aa6.55□□□□□ -1.36
CDH8-206ENST00000580044 UBE2Q2Q8WVN8 375 aa6.55□□□□□ -1.36
CDH8-206ENST00000580044 IGFLR1Q9H665 355 aa6.55□□□□□ -1.36
CDH8-206ENST00000580044 GRPEL1Q9HAV7 217 aa6.55□□□□□ -1.36
CDH8-206ENST00000580044 IFT57Q9NWB7 429 aa6.55□□□□□ -1.36
CDH8-206ENST00000580044 HCN4Q9Y3Q4 1203 aa6.55□□□□□ -1.36
CDH8-206ENST00000580044 EDC4Q6P2E9 1401 aaKnown RBP6.55□□□□□ -1.36
CDH8-206ENST00000580044 C3P01024 1663 aa6.55□□□□□ -1.36
CDH8-206ENST00000580044 CPSF1Q10570 1443 aaKnown RBP6.54□□□□□ -1.36
CDH8-206ENST00000580044 M0R2N6 131 aa6.54□□□□□ -1.36
CDH8-206ENST00000580044 HSP90AA1P07900 732 aaKnown RBP6.54□□□□□ -1.36
CDH8-206ENST00000580044 XRCC6P12956 609 aaKnown RBP eCLIP6.54□□□□□ -1.36
CDH8-206ENST00000580044 NRG1Q02297 640 aaPredicted RBP6.54□□□□□ -1.36
CDH8-206ENST00000580044 RAB3GAP1Q15042 981 aa6.54□□□□□ -1.36
CDH8-206ENST00000580044 CLEC17AQ6ZS10 378 aa6.54□□□□□ -1.36
CDH8-206ENST00000580044 PLEKHM2Q8IWE5 1019 aa6.54□□□□□ -1.36
CDH8-206ENST00000580044 GAS2L2Q8NHY3 880 aa6.54□□□□□ -1.36
CDH8-206ENST00000580044 ANP32BQ92688 251 aaKnown RBP6.54□□□□□ -1.36
CDH8-206ENST00000580044 BHMTQ93088 406 aa6.54□□□□□ -1.36
CDH8-206ENST00000580044 TRIM44Q96DX7 344 aaPredicted RBP6.54□□□□□ -1.36
CDH8-206ENST00000580044 API5Q9BZZ5 524 aaKnown RBP6.54□□□□□ -1.36
CDH8-206ENST00000580044 UBE2OQ9C0C9 1292 aaKnown RBP6.54□□□□□ -1.36
CDH8-206ENST00000580044 PHACTR1Q9C0D0 580 aa6.54□□□□□ -1.36
CDH8-206ENST00000580044 TNNQ9UQP3 1299 aa6.54□□□□□ -1.36
CDH8-206ENST00000580044 AGLP35573 1532 aa6.54□□□□□ -1.36
CDH8-206ENST00000580044 AATKQ6ZMQ8 1374 aa6.54□□□□□ -1.36
CDH8-206ENST00000580044 ABCC4O15439 1325 aa6.53□□□□□ -1.36
CDH8-206ENST00000580044 SPATA31D1Q6ZQQ2 1576 aa6.53□□□□□ -1.36
CDH8-206ENST00000580044 USP17L3A6NCW0 530 aa6.53□□□□□ -1.36
CDH8-206ENST00000580044 USP17L4A6NCW7 530 aa6.53□□□□□ -1.36
CDH8-206ENST00000580044 FYB1O15117 783 aa6.53□□□□□ -1.36
CDH8-206ENST00000580044 CDC45O75419 566 aa6.53□□□□□ -1.36
CDH8-206ENST00000580044 EPB42P16452 691 aa6.53□□□□□ -1.36
CDH8-206ENST00000580044 NFE2L2Q16236 605 aa6.53□□□□□ -1.36
CDH8-206ENST00000580044 USP17L2Q6R6M4 530 aa6.53□□□□□ -1.36
CDH8-206ENST00000580044 CASC1Q6TDU7 716 aa6.53□□□□□ -1.36
CDH8-206ENST00000580044 USP17L1Q7RTZ2 530 aa6.53□□□□□ -1.36
CDH8-206ENST00000580044 NBPF11Q86T75 865 aa6.53□□□□□ -1.36
CDH8-206ENST00000580044 MICALL1Q8N3F8 863 aa6.53□□□□□ -1.36
CDH8-206ENST00000580044 OGFOD1Q8N543 542 aa6.53□□□□□ -1.36
CDH8-206ENST00000580044 GGNBP2Q9H3C7 697 aa6.53□□□□□ -1.36
CDH8-206ENST00000580044 MKRN1Q9UHC7 482 aaKnown RBP6.53□□□□□ -1.36
CDH8-206ENST00000580044 NALCNQ8IZF0 1738 aa6.53□□□□□ -1.36
CDH8-206ENST00000580044 FMN2Q9NZ56 1722 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms