RNA–Protein interactions for RNA: ENST00000576148.1

RAB40B-210, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40B, Length 343 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-210ENST00000576148 LRP10Q7Z4F1 713 aa9.55□□□□□ -0.88
RAB40B-210ENST00000576148 ANKRD23Q86SG2 305 aa9.55□□□□□ -0.88
RAB40B-210ENST00000576148 ERO1BQ86YB8 467 aa9.55□□□□□ -0.88
RAB40B-210ENST00000576148 TAOK2Q9UL54 1235 aa9.55□□□□□ -0.88
RAB40B-210ENST00000576148 MED23Q9ULK4 1368 aa9.54□□□□□ -0.88
RAB40B-210ENST00000576148 IRS4O14654 1257 aaPredicted RBP9.54□□□□□ -0.88
RAB40B-210ENST00000576148 RTL5Q5HYW3 569 aaPredicted RBP9.54□□□□□ -0.88
RAB40B-210ENST00000576148 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.54□□□□□ -0.88
RAB40B-210ENST00000576148 PRMT6Q96LA8 375 aaPredicted RBP9.54□□□□□ -0.88
RAB40B-210ENST00000576148 MUC6Q6W4X9 2439 aa9.54□□□□□ -0.88
RAB40B-210ENST00000576148 SPDYE2BA6NHP3 402 aa9.53□□□□□ -0.88
RAB40B-210ENST00000576148 TNPO2O14787 897 aaKnown RBP9.53□□□□□ -0.88
RAB40B-210ENST00000576148 SPDYE6P0CI01 402 aa9.53□□□□□ -0.88
RAB40B-210ENST00000576148 HSP90B1P14625 803 aaKnown RBP9.53□□□□□ -0.88
RAB40B-210ENST00000576148 EIF2S2P20042 333 aaKnown RBP9.53□□□□□ -0.88
RAB40B-210ENST00000576148 EIF4G2P78344 907 aaKnown RBP eCLIP9.53□□□□□ -0.881e-6■■■■■ 29.4
RAB40B-210ENST00000576148 GTF2IP78347 998 aa9.53□□□□□ -0.88
RAB40B-210ENST00000576148 PPIL2Q13356 520 aa9.53□□□□□ -0.88
RAB40B-210ENST00000576148 PDIA6Q15084 440 aa9.53□□□□□ -0.88
RAB40B-210ENST00000576148 SHHQ15465 462 aa9.53□□□□□ -0.88
RAB40B-210ENST00000576148 CFAP100Q494V2 611 aa9.53□□□□□ -0.88
RAB40B-210ENST00000576148 XAGE3Q8WTP9 111 aa9.53□□□□□ -0.88
RAB40B-210ENST00000576148 PPM1EQ8WY54 764 aa9.53□□□□□ -0.88
RAB40B-210ENST00000576148 HMX1Q9NP08 348 aaPredicted RBP9.53□□□□□ -0.88
RAB40B-210ENST00000576148 OGDHLQ9ULD0 1010 aa9.53□□□□□ -0.88
RAB40B-210ENST00000576148 PCDHAC2Q9Y5I4 1007 aa9.53□□□□□ -0.88
RAB40B-210ENST00000576148 PFASO15067 1338 aa9.53□□□□□ -0.88
RAB40B-210ENST00000576148 COL4A1P02462 1669 aa9.52□□□□□ -0.89
RAB40B-210ENST00000576148 ANXA1P04083 346 aa9.52□□□□□ -0.89
RAB40B-210ENST00000576148 BCRP11274 1271 aa9.52□□□□□ -0.89
RAB40B-210ENST00000576148 RBM5P52756 815 aaKnown RBP eCLIP9.52□□□□□ -0.89
RAB40B-210ENST00000576148 LRRC26Q2I0M4 334 aa9.52□□□□□ -0.89
RAB40B-210ENST00000576148 PROSER3Q2NL68 480 aa9.52□□□□□ -0.89
RAB40B-210ENST00000576148 ANKRD18AQ8IVF6 992 aa9.52□□□□□ -0.89
RAB40B-210ENST00000576148 PARK7Q99497 189 aaKnown RBP9.52□□□□□ -0.89
RAB40B-210ENST00000576148 RSPH6AQ9H0K4 717 aa9.52□□□□□ -0.89
RAB40B-210ENST00000576148 PRKAG2Q9UGJ0 569 aa9.52□□□□□ -0.89
RAB40B-210ENST00000576148 GRIN2CQ14957 1233 aa9.51□□□□□ -0.89
RAB40B-210ENST00000576148 CCDC152Q4G0S7 254 aa9.51□□□□□ -0.89
RAB40B-210ENST00000576148 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.51□□□□□ -0.89
RAB40B-210ENST00000576148 COA7Q96BR5 231 aa9.51□□□□□ -0.89
RAB40B-210ENST00000576148 NECAB3Q96P71 396 aaPredicted RBP9.51□□□□□ -0.89
RAB40B-210ENST00000576148 EPHX3Q9H6B9 360 aa9.51□□□□□ -0.89
RAB40B-210ENST00000576148 SNCAIPQ9Y6H5 919 aa9.51□□□□□ -0.89
RAB40B-210ENST00000576148 CDH23Q9H251 3354 aa9.5□□□□□ -0.89
RAB40B-210ENST00000576148 F8W031 263 aaPredicted RBP9.5□□□□□ -0.89
RAB40B-210ENST00000576148 ATP5J2-PTCD1G3V325 749 aa9.5□□□□□ -0.89
RAB40B-210ENST00000576148 HMGCRP04035 888 aa9.5□□□□□ -0.89
RAB40B-210ENST00000576148 COL6A1P12109 1028 aa9.5□□□□□ -0.89
RAB40B-210ENST00000576148 CCT4P50991 539 aaKnown RBP9.5□□□□□ -0.89
RAB40B-210ENST00000576148 PPATQ06203 517 aa9.5□□□□□ -0.89
RAB40B-210ENST00000576148 PDE3AQ14432 1141 aa9.5□□□□□ -0.89
RAB40B-210ENST00000576148 AMER1Q5JTC6 1135 aaPredicted RBP9.5□□□□□ -0.89
RAB40B-210ENST00000576148 C9orf50Q5SZB4 431 aa9.5□□□□□ -0.89
RAB40B-210ENST00000576148 TEPSINQ96N21 525 aa9.5□□□□□ -0.89
RAB40B-210ENST00000576148 ISCA1Q9BUE6 129 aa9.5□□□□□ -0.89
RAB40B-210ENST00000576148 CYP2C8P10632 490 aa9.49□□□□□ -0.89
RAB40B-210ENST00000576148 TNNI2P48788 182 aa9.49□□□□□ -0.89
RAB40B-210ENST00000576148 AKNAD1Q5T1N1 836 aa9.49□□□□□ -0.89
RAB40B-210ENST00000576148 TXNRD3Q86VQ6 643 aa9.49□□□□□ -0.89
RAB40B-210ENST00000576148 CDAN1Q8IWY9 1227 aa9.49□□□□□ -0.89
RAB40B-210ENST00000576148 ZBTB38Q8NAP3 1195 aaPredicted RBP9.49□□□□□ -0.89
RAB40B-210ENST00000576148 ZKSCAN4Q969J2 545 aaPredicted RBP9.49□□□□□ -0.89
RAB40B-210ENST00000576148 WRNIP1Q96S55 665 aa9.49□□□□□ -0.89
RAB40B-210ENST00000576148 GAS2L1Q99501 681 aaPredicted RBP9.49□□□□□ -0.89
RAB40B-210ENST00000576148 ZNF70Q9UC06 446 aaPredicted RBP9.49□□□□□ -0.89
RAB40B-210ENST00000576148 KCNH4Q9UQ05 1017 aa9.49□□□□□ -0.89
RAB40B-210ENST00000576148 AOX1Q06278 1338 aa9.49□□□□□ -0.89
RAB40B-210ENST00000576148 GPR37L1O60883 481 aa9.48□□□□□ -0.89
RAB40B-210ENST00000576148 U2AF1L5P0DN76 240 aaPredicted RBP9.48□□□□□ -0.89
RAB40B-210ENST00000576148 U2AF1Q01081 240 aaKnown RBP eCLIP9.48□□□□□ -0.89
RAB40B-210ENST00000576148 FOXK2Q01167 660 aa9.48□□□□□ -0.89
RAB40B-210ENST00000576148 SPDYE2Q495Y8 402 aa9.48□□□□□ -0.89
RAB40B-210ENST00000576148 CERS5Q8N5B7 392 aa9.48□□□□□ -0.89
RAB40B-210ENST00000576148 PLBD2Q8NHP8 589 aa9.48□□□□□ -0.89
RAB40B-210ENST00000576148 CCDC85AQ96PX6 553 aaPredicted RBP9.48□□□□□ -0.89
RAB40B-210ENST00000576148 CDC5LQ99459 802 aaKnown RBP9.48□□□□□ -0.89
RAB40B-210ENST00000576148 TMEM39BQ9GZU3 492 aa9.48□□□□□ -0.89
RAB40B-210ENST00000576148 MINPP1Q9UNW1 487 aa9.48□□□□□ -0.89
RAB40B-210ENST00000576148 LEMD3Q9Y2U8 911 aa9.48□□□□□ -0.89
RAB40B-210ENST00000576148 OTOFQ9HC10 1997 aa9.48□□□□□ -0.89
RAB40B-210ENST00000576148 TCP10L2B9ZVM9 353 aa9.47□□□□□ -0.89
RAB40B-210ENST00000576148 POTEEQ6S8J3 1075 aa9.47□□□□□ -0.89
RAB40B-210ENST00000576148 RIC3Q7Z5B4 369 aa9.47□□□□□ -0.89
RAB40B-210ENST00000576148 HOOK2Q96ED9 719 aa9.47□□□□□ -0.89
RAB40B-210ENST00000576148 TSPYL2Q9H2G4 693 aaPredicted RBP9.47□□□□□ -0.89
RAB40B-210ENST00000576148 BSDC1Q9NW68 430 aaPredicted RBP9.47□□□□□ -0.89
RAB40B-210ENST00000576148 DDX60LQ5H9U9 1706 aaKnown RBP9.46□□□□□ -0.89
RAB40B-210ENST00000576148 BMP1P13497 986 aa9.46□□□□□ -0.9
RAB40B-210ENST00000576148 TRIM28Q13263 835 aaKnown RBP9.46□□□□□ -0.9
RAB40B-210ENST00000576148 CCDC85BQ15834 202 aaPredicted RBP9.46□□□□□ -0.9
RAB40B-210ENST00000576148 ZNF576Q9H609 170 aa9.46□□□□□ -0.9
RAB40B-210ENST00000576148 TDRD3Q9H7E2 651 aaKnown RBP9.46□□□□□ -0.9
RAB40B-210ENST00000576148 CD209Q9NNX6 404 aa9.46□□□□□ -0.9
RAB40B-210ENST00000576148 NUDCQ9Y266 331 aa9.46□□□□□ -0.9
RAB40B-210ENST00000576148 SMIM22K7EJ46 135 aa9.45□□□□□ -0.9
RAB40B-210ENST00000576148 PDE8AO60658 829 aa9.45□□□□□ -0.9
RAB40B-210ENST00000576148 FKBP1AP62942 108 aaKnown RBP9.45□□□□□ -0.9
RAB40B-210ENST00000576148 TRIM32Q13049 653 aa9.45□□□□□ -0.9
RAB40B-210ENST00000576148 MOGSQ13724 837 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms