RNA–Protein interactions for RNA: ENST00000575909.1

TOM1L1-222, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 3

Gene TOM1L1, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-222ENST00000575909 EMILIN2Q9BXX0 1053 aa9.53□□□□□ -0.88
TOM1L1-222ENST00000575909 LNPKQ9C0E8 428 aa9.53□□□□□ -0.88
TOM1L1-222ENST00000575909 MIR1-1HGQ9H1L0 117 aa9.53□□□□□ -0.88
TOM1L1-222ENST00000575909 SH2B1Q9NRF2 756 aaPredicted RBP9.53□□□□□ -0.88
TOM1L1-222ENST00000575909 GINM1Q9NU53 330 aa9.53□□□□□ -0.88
TOM1L1-222ENST00000575909 IGF1RP08069 1367 aa9.52□□□□□ -0.88
TOM1L1-222ENST00000575909 EIF4EBP3O60516 100 aaPredicted RBP9.52□□□□□ -0.89
TOM1L1-222ENST00000575909 VSIG8P0DPA2 414 aa9.52□□□□□ -0.89
TOM1L1-222ENST00000575909 ARNTP27540 789 aa9.52□□□□□ -0.89
TOM1L1-222ENST00000575909 SCARA3Q6AZY7 606 aa9.52□□□□□ -0.89
TOM1L1-222ENST00000575909 GDF6Q6KF10 455 aaPredicted RBP9.52□□□□□ -0.89
TOM1L1-222ENST00000575909 SLCO4C1Q6ZQN7 724 aa9.52□□□□□ -0.89
TOM1L1-222ENST00000575909 UBP1Q9NZI7 540 aa9.52□□□□□ -0.89
TOM1L1-222ENST00000575909 NFX1Q12986 1120 aaKnown RBP9.51□□□□□ -0.89
TOM1L1-222ENST00000575909 SULF2Q8IWU5 870 aa9.51□□□□□ -0.89
TOM1L1-222ENST00000575909 GATAD2BQ8WXI9 593 aa9.51□□□□□ -0.89
TOM1L1-222ENST00000575909 NKD1Q969G9 470 aa9.51□□□□□ -0.89
TOM1L1-222ENST00000575909 LRRC3Q9BY71 257 aa9.51□□□□□ -0.89
TOM1L1-222ENST00000575909 H3BRJ5 948 aa9.5□□□□□ -0.89
TOM1L1-222ENST00000575909 EPHA1P21709 976 aa9.5□□□□□ -0.89
TOM1L1-222ENST00000575909 LLGL2Q6P1M3 1020 aa9.5□□□□□ -0.89
TOM1L1-222ENST00000575909 SLITRK4Q8IW52 837 aa9.5□□□□□ -0.89
TOM1L1-222ENST00000575909 COL25A1Q9BXS0 654 aaPredicted RBP9.5□□□□□ -0.89
TOM1L1-222ENST00000575909 SOX17Q9H6I2 414 aaPredicted RBP9.5□□□□□ -0.89
TOM1L1-222ENST00000575909 PCDHB5Q9Y5E4 795 aa9.5□□□□□ -0.89
TOM1L1-222ENST00000575909 F13A1P00488 732 aa9.49□□□□□ -0.89
TOM1L1-222ENST00000575909 CRKP46108 304 aa9.49□□□□□ -0.89
TOM1L1-222ENST00000575909 SRSF11Q05519 484 aaKnown RBP9.49□□□□□ -0.89
TOM1L1-222ENST00000575909 AP3B2Q13367 1082 aa9.49□□□□□ -0.89
TOM1L1-222ENST00000575909 RASIP1Q5U651 963 aa9.49□□□□□ -0.89
TOM1L1-222ENST00000575909 KANK3Q6NY19 840 aa9.49□□□□□ -0.89
TOM1L1-222ENST00000575909 BNC2Q6ZN30 1099 aaPredicted RBP9.49□□□□□ -0.89
TOM1L1-222ENST00000575909 NOP9Q86U38 636 aaKnown RBP9.49□□□□□ -0.89
TOM1L1-222ENST00000575909 PMFBP1Q8TBY8 1022 aa9.49□□□□□ -0.89
TOM1L1-222ENST00000575909 NUDT8Q8WV74 236 aa9.49□□□□□ -0.89
TOM1L1-222ENST00000575909 SOX1O00570 391 aaPredicted RBP9.48□□□□□ -0.89
TOM1L1-222ENST00000575909 EPXP11678 715 aa9.48□□□□□ -0.89
TOM1L1-222ENST00000575909 MPP2Q14168 576 aa9.48□□□□□ -0.89
TOM1L1-222ENST00000575909 GRIK5Q16478 980 aa9.48□□□□□ -0.89
TOM1L1-222ENST00000575909 CCDC144BQ3MJ40 725 aa9.48□□□□□ -0.89
TOM1L1-222ENST00000575909 NBPF6Q5VWK0 638 aa9.48□□□□□ -0.89
TOM1L1-222ENST00000575909 C20orf204Q6ZNR8 217 aa9.48□□□□□ -0.89
TOM1L1-222ENST00000575909 CKAP2LQ8IYA6 745 aa9.48□□□□□ -0.89
TOM1L1-222ENST00000575909 JARID2Q92833 1246 aaPredicted RBP9.48□□□□□ -0.89
TOM1L1-222ENST00000575909 WNT8BQ93098 351 aa9.48□□□□□ -0.89
TOM1L1-222ENST00000575909 NBPF4Q96M43 638 aa9.48□□□□□ -0.89
TOM1L1-222ENST00000575909 CBX8Q9HC52 389 aa9.48□□□□□ -0.89
TOM1L1-222ENST00000575909 JPH1Q9HDC5 661 aaPredicted RBP9.48□□□□□ -0.89
TOM1L1-222ENST00000575909 STARD13Q9Y3M8 1113 aa9.48□□□□□ -0.89
TOM1L1-222ENST00000575909 PPME1Q9Y570 386 aa9.48□□□□□ -0.89
TOM1L1-222ENST00000575909 FAM221AA4D161 298 aa9.47□□□□□ -0.89
TOM1L1-222ENST00000575909 PIP4K2BP78356 416 aa9.47□□□□□ -0.89
TOM1L1-222ENST00000575909 ZNF252P-AS1Q0IIN9 211 aa9.47□□□□□ -0.89
TOM1L1-222ENST00000575909 CWF19L2Q2TBE0 894 aaKnown RBP9.47□□□□□ -0.89
TOM1L1-222ENST00000575909 SEZ6Q53EL9 994 aa9.47□□□□□ -0.89
TOM1L1-222ENST00000575909 RNFT1Q5M7Z0 435 aa9.47□□□□□ -0.89
TOM1L1-222ENST00000575909 FAM117BQ6P1L5 589 aa9.47□□□□□ -0.89
TOM1L1-222ENST00000575909 IL22RA1Q8N6P7 574 aa9.47□□□□□ -0.89
TOM1L1-222ENST00000575909 STK35Q8TDR2 534 aa9.47□□□□□ -0.89
TOM1L1-222ENST00000575909 CPLX3Q8WVH0 158 aa9.47□□□□□ -0.89
TOM1L1-222ENST00000575909 ZNF408Q9H9D4 720 aa9.47□□□□□ -0.89
TOM1L1-222ENST00000575909 CILPO75339 1184 aa9.46□□□□□ -0.9
TOM1L1-222ENST00000575909 CANXP27824 592 aaKnown RBP9.46□□□□□ -0.9
TOM1L1-222ENST00000575909 ARL4DP49703 201 aa9.46□□□□□ -0.9
TOM1L1-222ENST00000575909 SEPT6Q14141 434 aa9.46□□□□□ -0.9
TOM1L1-222ENST00000575909 SMARCA5O60264 1052 aaPredicted RBP9.45□□□□□ -0.9
TOM1L1-222ENST00000575909 LILRB5O75023 590 aa9.45□□□□□ -0.9
TOM1L1-222ENST00000575909 TRIM37O94972 964 aa9.45□□□□□ -0.9
TOM1L1-222ENST00000575909 BPNT1O95861 308 aa9.45□□□□□ -0.9
TOM1L1-222ENST00000575909 GSTP1P09211 210 aaKnown RBP9.45□□□□□ -0.9
TOM1L1-222ENST00000575909 C19orf57Q0VDD7 668 aa9.45□□□□□ -0.9
TOM1L1-222ENST00000575909 PDZD3Q86UT5 571 aa9.45□□□□□ -0.9
TOM1L1-222ENST00000575909 FAM177A1Q8N128 213 aaPredicted RBP9.45□□□□□ -0.9
TOM1L1-222ENST00000575909 FBXO27Q8NI29 283 aa9.45□□□□□ -0.9
TOM1L1-222ENST00000575909 GRIN3AQ8TCU5 1115 aa9.45□□□□□ -0.9
TOM1L1-222ENST00000575909 SLC16A10Q8TF71 515 aa9.45□□□□□ -0.9
TOM1L1-222ENST00000575909 OSBPL2Q9H1P3 480 aa9.45□□□□□ -0.9
TOM1L1-222ENST00000575909 OSGEPQ9NPF4 335 aa9.45□□□□□ -0.9
TOM1L1-222ENST00000575909 TLR3O15455 904 aaKnown RBP9.44□□□□□ -0.9
TOM1L1-222ENST00000575909 ALBP02768 609 aa9.44□□□□□ -0.9
TOM1L1-222ENST00000575909 CYP11A1P05108 521 aa9.44□□□□□ -0.9
TOM1L1-222ENST00000575909 BAG6P46379 1132 aa9.44□□□□□ -0.9
TOM1L1-222ENST00000575909 ZNF165P49910 485 aa9.44□□□□□ -0.9
TOM1L1-222ENST00000575909 AFF1P51825 1210 aaKnown RBP9.44□□□□□ -0.9
TOM1L1-222ENST00000575909 GSTM4Q03013 218 aa9.44□□□□□ -0.9
TOM1L1-222ENST00000575909 REXO1Q8N1G1 1221 aaKnown RBP9.44□□□□□ -0.9
TOM1L1-222ENST00000575909 GAL3ST3Q96A11 431 aa9.44□□□□□ -0.9
TOM1L1-222ENST00000575909 SRRTQ9BXP5 876 aaKnown RBP9.44□□□□□ -0.9
TOM1L1-222ENST00000575909 TERTO14746 1132 aaKnown RBP9.43□□□□□ -0.9
TOM1L1-222ENST00000575909 CDC25BP30305 580 aa9.43□□□□□ -0.9
TOM1L1-222ENST00000575909 MCM4P33991 863 aa9.43□□□□□ -0.9
TOM1L1-222ENST00000575909 ETFBP38117 255 aa9.43□□□□□ -0.9
TOM1L1-222ENST00000575909 MAP1SQ66K74 1059 aaPredicted RBP9.43□□□□□ -0.9
TOM1L1-222ENST00000575909 GIMAP6Q6P9H5 292 aa9.43□□□□□ -0.9
TOM1L1-222ENST00000575909 REC114Q7Z4M0 266 aa9.43□□□□□ -0.9
TOM1L1-222ENST00000575909 SLC7A3Q8WY07 619 aa9.43□□□□□ -0.9
TOM1L1-222ENST00000575909 ACDQ96AP0 544 aa9.43□□□□□ -0.9
TOM1L1-222ENST00000575909 ZSWIM4Q9H7M6 989 aa9.43□□□□□ -0.9
TOM1L1-222ENST00000575909 CACNA2D2Q9NY47 1150 aa9.43□□□□□ -0.9
TOM1L1-222ENST00000575909 MRVI1Q9Y6F6 885 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms