RNA–Protein interactions for RNA: ENST00000575338.1

SMG6-217, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-217ENST00000575338 NECAB1Q8N987 351 aa7.99□□□□□ -1.13
SMG6-217ENST00000575338 SMARCC2Q8TAQ2 1214 aa7.99□□□□□ -1.13
SMG6-217ENST00000575338 TRIM44Q96DX7 344 aaPredicted RBP7.99□□□□□ -1.13
SMG6-217ENST00000575338 ZNF396Q96N95 335 aaPredicted RBP7.99□□□□□ -1.13
SMG6-217ENST00000575338 PUS7LQ9H0K6 701 aaKnown RBP7.99□□□□□ -1.13
SMG6-217ENST00000575338 ANGEL1Q9UNK9 670 aaKnown RBP7.99□□□□□ -1.13
SMG6-217ENST00000575338 RGPD3A6NKT7 1758 aaPredicted RBP7.98□□□□□ -1.13
SMG6-217ENST00000575338 RGPD4Q7Z3J3 1758 aa7.98□□□□□ -1.13
SMG6-217ENST00000575338 TCRBV5S4A2TA0A5A2 114 aa7.98□□□□□ -1.13
SMG6-217ENST00000575338 PRC1O43663 620 aa7.98□□□□□ -1.13
SMG6-217ENST00000575338 SLC3A2P08195 630 aaKnown RBP7.98□□□□□ -1.13
SMG6-217ENST00000575338 TDO2P48775 406 aa7.98□□□□□ -1.13
SMG6-217ENST00000575338 NASPP49321 788 aaPredicted RBP7.98□□□□□ -1.13
SMG6-217ENST00000575338 RCAN1P53805 252 aa7.98□□□□□ -1.13
SMG6-217ENST00000575338 SCRN1Q12765 414 aa7.98□□□□□ -1.13
SMG6-217ENST00000575338 STK3Q13188 491 aa7.98□□□□□ -1.13
SMG6-217ENST00000575338 PPP2R5BQ15173 497 aa7.98□□□□□ -1.13
SMG6-217ENST00000575338 FOXD4L5Q5VV16 416 aaPredicted RBP7.98□□□□□ -1.13
SMG6-217ENST00000575338 STOX1Q6ZVD7 989 aa7.98□□□□□ -1.13
SMG6-217ENST00000575338 USP48Q86UV5 1035 aa7.98□□□□□ -1.13
SMG6-217ENST00000575338 MB21D2Q8IYB1 491 aaPredicted RBP7.98□□□□□ -1.13
SMG6-217ENST00000575338 SEPT12Q8IYM1 358 aa7.98□□□□□ -1.13
SMG6-217ENST00000575338 CNBD1Q8NA66 436 aa7.98□□□□□ -1.13
SMG6-217ENST00000575338 HELBQ8NG08 1087 aaPredicted RBP7.98□□□□□ -1.13
SMG6-217ENST00000575338 FOXD4L4Q8WXT5 416 aaPredicted RBP7.98□□□□□ -1.13
SMG6-217ENST00000575338 STRBPQ96SI9 672 aaKnown RBP7.98□□□□□ -1.13
SMG6-217ENST00000575338 PIH1D3Q9NQM4 214 aaKnown RBP7.98□□□□□ -1.13
SMG6-217ENST00000575338 NAP1L2Q9ULW6 460 aaPredicted RBP7.98□□□□□ -1.13
SMG6-217ENST00000575338 LEMD3Q9Y2U8 911 aa7.98□□□□□ -1.13
SMG6-217ENST00000575338 DLEC1Q9Y238 1755 aa7.97□□□□□ -1.13
SMG6-217ENST00000575338 CCDC196A0A1B0GTZ2 297 aa7.97□□□□□ -1.13
SMG6-217ENST00000575338 MBD4O95243 580 aa7.97□□□□□ -1.13
SMG6-217ENST00000575338 XRCC6P12956 609 aaKnown RBP eCLIP7.97□□□□□ -1.13
SMG6-217ENST00000575338 PDIA3P30101 505 aaKnown RBP7.97□□□□□ -1.13
SMG6-217ENST00000575338 LIFRP42702 1097 aa7.97□□□□□ -1.13
SMG6-217ENST00000575338 APOBRQ0VD83 1088 aa7.97□□□□□ -1.13
SMG6-217ENST00000575338 ZNF772Q68DY9 489 aaPredicted RBP7.97□□□□□ -1.13
SMG6-217ENST00000575338 BICDL1Q6ZP65 573 aa7.97□□□□□ -1.13
SMG6-217ENST00000575338 MFSD6Q6ZSS7 791 aa7.97□□□□□ -1.13
SMG6-217ENST00000575338 KRT27Q7Z3Y8 459 aa7.97□□□□□ -1.13
SMG6-217ENST00000575338 IFNL3Q8IZI9 196 aa7.97□□□□□ -1.13
SMG6-217ENST00000575338 NSUN7Q8NE18 718 aaKnown RBP7.97□□□□□ -1.13
SMG6-217ENST00000575338 FLAD1Q8NFF5 587 aa7.97□□□□□ -1.13
SMG6-217ENST00000575338 GPT2Q8TD30 523 aa7.97□□□□□ -1.13
SMG6-217ENST00000575338 WASF1Q92558 559 aa7.97□□□□□ -1.13
SMG6-217ENST00000575338 RPGRQ92834 1020 aaKnown RBP7.97□□□□□ -1.13
SMG6-217ENST00000575338 ARHGEF1Q92888 912 aaKnown RBP7.97□□□□□ -1.13
SMG6-217ENST00000575338 SPATA32Q96LK8 384 aa7.97□□□□□ -1.13
SMG6-217ENST00000575338 TCEANC2Q96MN5 208 aa7.97□□□□□ -1.13
SMG6-217ENST00000575338 LARP6Q9BRS8 491 aaKnown RBP7.97□□□□□ -1.13
SMG6-217ENST00000575338 BCL2L12Q9HB09 334 aa7.97□□□□□ -1.13
SMG6-217ENST00000575338 RAI14Q9P0K7 980 aa7.97□□□□□ -1.13
SMG6-217ENST00000575338 MINPP1Q9UNW1 487 aa7.97□□□□□ -1.13
SMG6-217ENST00000575338 CACNA1SQ13698 1873 aa7.97□□□□□ -1.13
SMG6-217ENST00000575338 MAGEB6P1A0A0J9YX57 407 aa7.96□□□□□ -1.14
SMG6-217ENST00000575338 KLF18A0A0U1RQI7 1052 aa7.96□□□□□ -1.14
SMG6-217ENST00000575338 PTPDC1A2A3K4 754 aa7.96□□□□□ -1.14
SMG6-217ENST00000575338 CCDC69A6NI79 296 aa7.96□□□□□ -1.14
SMG6-217ENST00000575338 GOLGA8BA8MQT2 603 aa7.96□□□□□ -1.14
SMG6-217ENST00000575338 FIBPO43427 364 aa7.96□□□□□ -1.14
SMG6-217ENST00000575338 HIBADHP31937 336 aaKnown RBP7.96□□□□□ -1.14
SMG6-217ENST00000575338 BCAMP50895 628 aa7.96□□□□□ -1.14
SMG6-217ENST00000575338 HAND2P61296 217 aa7.96□□□□□ -1.14
SMG6-217ENST00000575338 GSTO1P78417 241 aa7.96□□□□□ -1.14
SMG6-217ENST00000575338 ST3GAL1Q11201 340 aa7.96□□□□□ -1.14
SMG6-217ENST00000575338 GRAPQ13588 217 aa7.96□□□□□ -1.14
SMG6-217ENST00000575338 TRIM29Q14134 588 aa7.96□□□□□ -1.14
SMG6-217ENST00000575338 UVSSAQ2YD98 709 aa7.96□□□□□ -1.14
SMG6-217ENST00000575338 AKNAD1Q5T1N1 836 aa7.96□□□□□ -1.14
SMG6-217ENST00000575338 PI16Q6UXB8 463 aa7.96□□□□□ -1.14
SMG6-217ENST00000575338 BRAPQ7Z569 592 aa7.96□□□□□ -1.14
SMG6-217ENST00000575338 FBXO33Q7Z6M2 555 aa7.96□□□□□ -1.14
SMG6-217ENST00000575338 AMOTL1Q8IY63 956 aa7.96□□□□□ -1.14
SMG6-217ENST00000575338 WDR66Q8TBY9 1149 aa7.96□□□□□ -1.14
SMG6-217ENST00000575338 GRAPLQ8TC17 118 aaPredicted RBP7.96□□□□□ -1.14
SMG6-217ENST00000575338 STAG1Q8WVM7 1258 aa7.96□□□□□ -1.14
SMG6-217ENST00000575338 RBM17Q96I25 401 aaKnown RBP7.96□□□□□ -1.14
SMG6-217ENST00000575338 NOL10Q9BSC4 688 aaKnown RBP7.96□□□□□ -1.14
SMG6-217ENST00000575338 BRIP1Q9BX63 1249 aa7.96□□□□□ -1.14
SMG6-217ENST00000575338 TSPY26PQ9H489 355 aa7.96□□□□□ -1.14
SMG6-217ENST00000575338 QTRT2Q9H974 415 aaKnown RBP7.96□□□□□ -1.14
SMG6-217ENST00000575338 DDX19AQ9NUU7 478 aaKnown RBP7.96□□□□□ -1.14
SMG6-217ENST00000575338 WWC3Q9ULE0 1092 aa7.96□□□□□ -1.14
SMG6-217ENST00000575338 CNPY2Q9Y2B0 182 aa7.96□□□□□ -1.14
SMG6-217ENST00000575338 SLC4A4Q9Y6R1 1079 aa7.96□□□□□ -1.14
SMG6-217ENST00000575338 XDHP47989 1333 aa7.96□□□□□ -1.14
SMG6-217ENST00000575338 BAZ2AQ9UIF9 1905 aaKnown RBP7.95□□□□□ -1.14
SMG6-217ENST00000575338 TNRC6CQ9HCJ0 1690 aaKnown RBP7.95□□□□□ -1.14
SMG6-217ENST00000575338 ECM29Q5VYK3 1845 aa7.95□□□□□ -1.14
SMG6-217ENST00000575338 ZBTB43O43298 467 aa7.95□□□□□ -1.14
SMG6-217ENST00000575338 CAVIN2O95810 425 aa7.95□□□□□ -1.14
SMG6-217ENST00000575338 LDHCP07864 332 aa7.95□□□□□ -1.14
SMG6-217ENST00000575338 CYP7A1P22680 504 aa7.95□□□□□ -1.14
SMG6-217ENST00000575338 METAP2P50579 478 aaKnown RBP eCLIP7.95□□□□□ -1.14
SMG6-217ENST00000575338 DNM1Q05193 864 aaKnown RBP7.95□□□□□ -1.14
SMG6-217ENST00000575338 TTLL5Q6EMB2 1281 aa7.95□□□□□ -1.14
SMG6-217ENST00000575338 NFXL1Q6ZNB6 911 aa7.95□□□□□ -1.14
SMG6-217ENST00000575338 CDC37L1Q7L3B6 337 aa7.95□□□□□ -1.14
SMG6-217ENST00000575338 ZNF804AQ7Z570 1209 aa7.95□□□□□ -1.14
SMG6-217ENST00000575338 SGMS1Q86VZ5 419 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms