RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 PFKFB1P16118 471 aa18.14■□□□□ 0.49
NUP88-207ENST00000573584 KIF23Q02241 960 aaPredicted RBP18.14■□□□□ 0.49
NUP88-207ENST00000573584 KMT5BQ4FZB7 885 aa18.14■□□□□ 0.49
NUP88-207ENST00000573584 APPBP2Q92624 585 aa18.14■□□□□ 0.49
NUP88-207ENST00000573584 SLU7O95391 586 aaKnown RBP18.13■□□□□ 0.49
NUP88-207ENST00000573584 SCARF1Q14162 830 aa18.13■□□□□ 0.49
NUP88-207ENST00000573584 MORC2Q9Y6X9 1032 aaPredicted RBP18.13■□□□□ 0.49
NUP88-207ENST00000573584 ZAP70P43403 619 aa18.13■□□□□ 0.49
NUP88-207ENST00000573584 CCDC85AQ96PX6 553 aaPredicted RBP18.13■□□□□ 0.49
NUP88-207ENST00000573584 PLEKHG2Q9H7P9 1386 aa18.13■□□□□ 0.49
NUP88-207ENST00000573584 KIF1AQ12756 1690 aa18.13■□□□□ 0.49
NUP88-207ENST00000573584 MARCKSP29966 332 aaPredicted RBP18.12■□□□□ 0.49
NUP88-207ENST00000573584 NCAPHQ15003 741 aa18.12■□□□□ 0.49
NUP88-207ENST00000573584 ISM2Q6H9L7 571 aa18.12■□□□□ 0.49
NUP88-207ENST00000573584 PPP1R13BQ96KQ4 1090 aa18.12■□□□□ 0.49
NUP88-207ENST00000573584 ALS2Q96Q42 1657 aa18.12■□□□□ 0.49
NUP88-207ENST00000573584 ELF2Q15723 593 aa18.12■□□□□ 0.49
NUP88-207ENST00000573584 NRDCO43847 1150 aa18.12■□□□□ 0.49
NUP88-207ENST00000573584 WDHD1O75717 1129 aaPredicted RBP18.12■□□□□ 0.49
NUP88-207ENST00000573584 ATF3P18847 181 aa18.12■□□□□ 0.49
NUP88-207ENST00000573584 LMOD1P29536 600 aaPredicted RBP18.12■□□□□ 0.49
NUP88-207ENST00000573584 SPEF2Q9C093 1822 aa18.11■□□□□ 0.49
NUP88-207ENST00000573584 GLI3P10071 1580 aa18.11■□□□□ 0.49
NUP88-207ENST00000573584 GPAA1O43292 621 aa18.11■□□□□ 0.49
NUP88-207ENST00000573584 SLC39A14Q15043 492 aa18.11■□□□□ 0.49
NUP88-207ENST00000573584 PI16Q6UXB8 463 aa18.11■□□□□ 0.49
NUP88-207ENST00000573584 ZNF142P52746 1687 aaPredicted RBP18.11■□□□□ 0.49
NUP88-207ENST00000573584 PSDA5PKW4 1024 aaPredicted RBP18.11■□□□□ 0.49
NUP88-207ENST00000573584 DHX8Q14562 1220 aaKnown RBP18.11■□□□□ 0.49
NUP88-207ENST00000573584 TAF7LQ5H9L4 462 aa18.11■□□□□ 0.49
NUP88-207ENST00000573584 FANCCQ00597 558 aa18.1■□□□□ 0.49
NUP88-207ENST00000573584 TRDNQ13061 729 aa18.1■□□□□ 0.49
NUP88-207ENST00000573584 SYTL4Q96C24 671 aaPredicted RBP18.1■□□□□ 0.49
NUP88-207ENST00000573584 TAOK2Q9UL54 1235 aa18.1■□□□□ 0.49
NUP88-207ENST00000573584 SYKP43405 635 aa18.1■□□□□ 0.49
NUP88-207ENST00000573584 FBXO38Q6PIJ6 1188 aa18.1■□□□□ 0.49
NUP88-207ENST00000573584 SYT10Q6XYQ8 523 aa18.1■□□□□ 0.49
NUP88-207ENST00000573584 FBXO3Q9UK99 471 aa18.1■□□□□ 0.49
NUP88-207ENST00000573584 MROH7-TTC4A0A0A0MT08 1334 aa18.1■□□□□ 0.49
NUP88-207ENST00000573584 WDR19Q8NEZ3 1342 aa18.1■□□□□ 0.49
NUP88-207ENST00000573584 LAMB4A4D0S4 1761 aa18.09■□□□□ 0.49
NUP88-207ENST00000573584 COL18A1P39060 1754 aa18.09■□□□□ 0.49
NUP88-207ENST00000573584 IKBKBO14920 756 aa18.09■□□□□ 0.49
NUP88-207ENST00000573584 NPHP1O15259 732 aa18.09■□□□□ 0.49
NUP88-207ENST00000573584 AIFM3Q96NN9 605 aa18.09■□□□□ 0.49
NUP88-207ENST00000573584 ZCRB1Q8TBF4 217 aaKnown RBP18.09■□□□□ 0.49
NUP88-207ENST00000573584 TIGD1Q96MW7 591 aa18.09■□□□□ 0.49
NUP88-207ENST00000573584 ALG1Q9BT22 464 aa18.09■□□□□ 0.49
NUP88-207ENST00000573584 ISCA1Q9BUE6 129 aa18.09■□□□□ 0.49
NUP88-207ENST00000573584 ZNF330Q9Y3S2 320 aaPredicted RBP18.09■□□□□ 0.49
NUP88-207ENST00000573584 ERVV-2B6SEH9 535 aa18.09■□□□□ 0.49
NUP88-207ENST00000573584 ATP1A3P13637 1013 aa18.09■□□□□ 0.49
NUP88-207ENST00000573584 KCNJ6P48051 423 aa18.09■□□□□ 0.49
NUP88-207ENST00000573584 L2HGDHQ9H9P8 463 aa18.09■□□□□ 0.49
NUP88-207ENST00000573584 ANGEL1Q9UNK9 670 aaKnown RBP18.09■□□□□ 0.49
NUP88-207ENST00000573584 NWD2Q9ULI1 1742 aa18.08■□□□□ 0.49
NUP88-207ENST00000573584 GABPB1Q06547 395 aaPredicted RBP18.08■□□□□ 0.49
NUP88-207ENST00000573584 TJP1Q07157 1748 aa18.08■□□□□ 0.49
NUP88-207ENST00000573584 TCIRG1Q13488 830 aa18.08■□□□□ 0.49
NUP88-207ENST00000573584 VPS37DQ86XT2 251 aa18.08■□□□□ 0.49
NUP88-207ENST00000573584 KRT222Q8N1A0 295 aa18.08■□□□□ 0.49
NUP88-207ENST00000573584 FAM89AQ96GI7 184 aa18.08■□□□□ 0.49
NUP88-207ENST00000573584 DENND2AQ9ULE3 1009 aa18.08■□□□□ 0.49
NUP88-207ENST00000573584 PCDH11XQ9BZA7 1347 aa18.08■□□□□ 0.48
NUP88-207ENST00000573584 PCDH11YQ9BZA8 1340 aa18.08■□□□□ 0.48
NUP88-207ENST00000573584 METAP2P50579 478 aaKnown RBP eCLIP18.08■□□□□ 0.48
NUP88-207ENST00000573584 IFIT5Q13325 482 aaKnown RBP18.08■□□□□ 0.48
NUP88-207ENST00000573584 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.08■□□□□ 0.48
NUP88-207ENST00000573584 PKD1L3Q7Z443 1732 aa18.07■□□□□ 0.48
NUP88-207ENST00000573584 ZMYM6O95789 1325 aa18.07■□□□□ 0.48
NUP88-207ENST00000573584 GNL2Q13823 731 aaKnown RBP18.07■□□□□ 0.48
NUP88-207ENST00000573584 ZNF771Q7L3S4 317 aaPredicted RBP18.07■□□□□ 0.48
NUP88-207ENST00000573584 HSD3B7Q9H2F3 369 aa18.07■□□□□ 0.48
NUP88-207ENST00000573584 TUBE1Q9UJT0 475 aa18.07■□□□□ 0.48
NUP88-207ENST00000573584 CPDO75976 1380 aa18.07■□□□□ 0.48
NUP88-207ENST00000573584 CDKL5O76039 1030 aa18.07■□□□□ 0.48
NUP88-207ENST00000573584 RXRAP19793 462 aa18.07■□□□□ 0.48
NUP88-207ENST00000573584 KRT40Q6A162 431 aa18.07■□□□□ 0.48
NUP88-207ENST00000573584 HOMER1Q86YM7 354 aa18.07■□□□□ 0.48
NUP88-207ENST00000573584 JMYQ8N9B5 988 aa18.07■□□□□ 0.48
NUP88-207ENST00000573584 NBPF3Q9H094 633 aa18.07■□□□□ 0.48
NUP88-207ENST00000573584 SERPINC1P01008 464 aa18.06■□□□□ 0.48
NUP88-207ENST00000573584 TUBB4AP04350 444 aa18.06■□□□□ 0.48
NUP88-207ENST00000573584 UBASH3AP57075 661 aa18.06■□□□□ 0.48
NUP88-207ENST00000573584 SHC4Q6S5L8 630 aa18.06■□□□□ 0.48
NUP88-207ENST00000573584 RGS22Q8NE09 1264 aa18.06■□□□□ 0.48
NUP88-207ENST00000573584 HPSEQ9Y251 543 aa18.06■□□□□ 0.48
NUP88-207ENST00000573584 PPP6R2O75170 966 aa18.06■□□□□ 0.48
NUP88-207ENST00000573584 APPP05067 770 aa18.06■□□□□ 0.48
NUP88-207ENST00000573584 ERCC6LQ2NKX8 1250 aa18.06■□□□□ 0.48
NUP88-207ENST00000573584 SLC9C2Q5TAH2 1124 aa18.06■□□□□ 0.48
NUP88-207ENST00000573584 PHKBQ93100 1093 aa18.06■□□□□ 0.48
NUP88-207ENST00000573584 NUP188Q5SRE5 1749 aa18.06■□□□□ 0.48
NUP88-207ENST00000573584 MCAMP43121 646 aa18.05■□□□□ 0.48
NUP88-207ENST00000573584 CPLX2Q6PUV4 134 aaKnown RBP18.05■□□□□ 0.48
NUP88-207ENST00000573584 CYB5R4Q7L1T6 521 aa18.05■□□□□ 0.48
NUP88-207ENST00000573584 ABCC12Q96J65 1359 aa18.05■□□□□ 0.48
NUP88-207ENST00000573584 MYL5Q02045 173 aa18.05■□□□□ 0.48
NUP88-207ENST00000573584 PNOCQ13519 176 aa18.05■□□□□ 0.48
NUP88-207ENST00000573584 CCDC93Q567U6 631 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms