RNA–Protein interactions for RNA: ENST00000572824.1

NPLOC4-210, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-210ENST00000572824 HOXA2O43364 376 aa11.94□□□□□ -0.5
NPLOC4-210ENST00000572824 BBOX1O75936 387 aa11.94□□□□□ -0.5
NPLOC4-210ENST00000572824 NDUFV2P19404 249 aa11.94□□□□□ -0.5
NPLOC4-210ENST00000572824 FUT2Q10981 343 aa11.94□□□□□ -0.5
NPLOC4-210ENST00000572824 SF3B3Q15393 1217 aaKnown RBP11.94□□□□□ -0.5
NPLOC4-210ENST00000572824 CIAPIN1Q6FI81 312 aa11.94□□□□□ -0.5
NPLOC4-210ENST00000572824 CYP4F22Q6NT55 531 aa11.94□□□□□ -0.5
NPLOC4-210ENST00000572824 RSBN1LQ6PCB5 846 aaPredicted RBP11.94□□□□□ -0.5
NPLOC4-210ENST00000572824 HYPKQ9NX55 129 aa11.94□□□□□ -0.5
NPLOC4-210ENST00000572824 LIMD1Q9UGP4 676 aa11.94□□□□□ -0.5
NPLOC4-210ENST00000572824 CASP8AP2Q9UKL3 1982 aa11.93□□□□□ -0.5
NPLOC4-210ENST00000572824 AOC2O75106 756 aa11.93□□□□□ -0.5
NPLOC4-210ENST00000572824 IGKV5-2P06315 115 aa11.93□□□□□ -0.5
NPLOC4-210ENST00000572824 GNAI1P63096 354 aa11.93□□□□□ -0.5
NPLOC4-210ENST00000572824 CWF19L2Q2TBE0 894 aaKnown RBP11.93□□□□□ -0.5
NPLOC4-210ENST00000572824 WBP1LQ9NX94 342 aa11.93□□□□□ -0.5
NPLOC4-210ENST00000572824 NSFL1CQ9UNZ2 370 aaKnown RBP11.93□□□□□ -0.5
NPLOC4-210ENST00000572824 SALL2Q9Y467 1007 aaPredicted RBP11.93□□□□□ -0.5
NPLOC4-210ENST00000572824 WDR33Q9C0J8 1336 aaKnown RBP11.92□□□□□ -0.5
NPLOC4-210ENST00000572824 ACTN4O43707 911 aaKnown RBP11.92□□□□□ -0.5
NPLOC4-210ENST00000572824 ECE2O60344 883 aa11.92□□□□□ -0.5
NPLOC4-210ENST00000572824 GJA5P36382 358 aa11.92□□□□□ -0.5
NPLOC4-210ENST00000572824 TBC1D10BQ4KMP7 808 aaPredicted RBP11.92□□□□□ -0.5
NPLOC4-210ENST00000572824 USP50Q70EL3 339 aaPredicted RBP11.92□□□□□ -0.5
NPLOC4-210ENST00000572824 TBC1D16Q8TBP0 767 aa11.92□□□□□ -0.5
NPLOC4-210ENST00000572824 ZIC5Q96T25 663 aa11.92□□□□□ -0.5
NPLOC4-210ENST00000572824 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.92□□□□□ -0.5
NPLOC4-210ENST00000572824 BCL2L13Q9BXK5 485 aa11.92□□□□□ -0.5
NPLOC4-210ENST00000572824 ZNF408Q9H9D4 720 aa11.92□□□□□ -0.5
NPLOC4-210ENST00000572824 ADARB2Q9NS39 739 aaKnown RBP11.92□□□□□ -0.5
NPLOC4-210ENST00000572824 SCAF8Q9UPN6 1271 aaKnown RBP11.92□□□□□ -0.5
NPLOC4-210ENST00000572824 MAP3K2Q9Y2U5 619 aa11.92□□□□□ -0.5
NPLOC4-210ENST00000572824 ADM5C9JUS6 153 aa11.91□□□□□ -0.5
NPLOC4-210ENST00000572824 C6orf229H3BNL8 230 aa11.91□□□□□ -0.5
NPLOC4-210ENST00000572824 LBX1P52954 281 aa11.91□□□□□ -0.5
NPLOC4-210ENST00000572824 DEFB115Q30KQ5 88 aa11.91□□□□□ -0.5
NPLOC4-210ENST00000572824 ZBTB38Q8NAP3 1195 aaPredicted RBP11.91□□□□□ -0.5
NPLOC4-210ENST00000572824 METTL22Q9BUU2 404 aaPredicted RBP11.91□□□□□ -0.5
NPLOC4-210ENST00000572824 PRR14Q9BWN1 585 aa11.91□□□□□ -0.5
NPLOC4-210ENST00000572824 CNOT7Q9UIV1 285 aaKnown RBP11.91□□□□□ -0.5
NPLOC4-210ENST00000572824 PI4KAP2A4QPH2 592 aa11.9□□□□□ -0.5
NPLOC4-210ENST00000572824 UFL1O94874 794 aa11.9□□□□□ -0.5
NPLOC4-210ENST00000572824 CELF2O95319 508 aaKnown RBP11.9□□□□□ -0.5
NPLOC4-210ENST00000572824 HSPA8P11142 646 aaKnown RBP11.9□□□□□ -0.5
NPLOC4-210ENST00000572824 RPS8P62241 208 aaKnown RBP11.9□□□□□ -0.5
NPLOC4-210ENST00000572824 TRIM28Q13263 835 aaKnown RBP11.9□□□□□ -0.5
NPLOC4-210ENST00000572824 WASHC4Q2M389 1173 aa11.9□□□□□ -0.5
NPLOC4-210ENST00000572824 TUSC1Q2TAM9 212 aa11.9□□□□□ -0.5
NPLOC4-210ENST00000572824 GRIPAP1Q4V328 841 aa11.9□□□□□ -0.5
NPLOC4-210ENST00000572824 WWC1Q8IX03 1113 aa11.9□□□□□ -0.5
NPLOC4-210ENST00000572824 PI4KAP1Q8N8J0 262 aa11.9□□□□□ -0.5
NPLOC4-210ENST00000572824 SUPT20HQ8NEM7 779 aa11.9□□□□□ -0.5
NPLOC4-210ENST00000572824 HLA-CQ95604 372 aa11.9□□□□□ -0.5
NPLOC4-210ENST00000572824 CAPNS2Q96L46 248 aa11.9□□□□□ -0.5
NPLOC4-210ENST00000572824 MXD3Q9BW11 206 aa11.9□□□□□ -0.5
NPLOC4-210ENST00000572824 FANCIQ9NVI1 1328 aa11.89□□□□□ -0.51
NPLOC4-210ENST00000572824 CACNA1FO60840 1977 aa11.89□□□□□ -0.51
NPLOC4-210ENST00000572824 PCCAP05165 728 aaPredicted RBP11.89□□□□□ -0.51
NPLOC4-210ENST00000572824 KLRK1P26718 216 aa11.89□□□□□ -0.51
NPLOC4-210ENST00000572824 USP48Q86UV5 1035 aa11.89□□□□□ -0.51
NPLOC4-210ENST00000572824 TMX4Q9H1E5 349 aaPredicted RBP11.89□□□□□ -0.51
NPLOC4-210ENST00000572824 CWC25Q9NXE8 425 aaPredicted RBP11.89□□□□□ -0.51
NPLOC4-210ENST00000572824 TLL2Q9Y6L7 1015 aa11.89□□□□□ -0.51
NPLOC4-210ENST00000572824 FDX1P10109 184 aa11.88□□□□□ -0.51
NPLOC4-210ENST00000572824 GUCA2AQ02747 115 aa11.88□□□□□ -0.51
NPLOC4-210ENST00000572824 GREM2Q9H772 168 aa11.88□□□□□ -0.51
NPLOC4-210ENST00000572824 PCDHB15Q9Y5E8 787 aa11.88□□□□□ -0.51
NPLOC4-210ENST00000572824 NEURL1BA8MQ27 555 aa11.87□□□□□ -0.51
NPLOC4-210ENST00000572824 SNAP23O00161 211 aa11.87□□□□□ -0.51
NPLOC4-210ENST00000572824 PDE8AO60658 829 aa11.87□□□□□ -0.51
NPLOC4-210ENST00000572824 CTSWP56202 376 aa11.87□□□□□ -0.51
NPLOC4-210ENST00000572824 TWISTNBQ3B726 338 aaPredicted RBP11.87□□□□□ -0.51
NPLOC4-210ENST00000572824 UBE3BQ7Z3V4 1068 aa11.87□□□□□ -0.51
NPLOC4-210ENST00000572824 SAPCD2Q86UD0 394 aa11.87□□□□□ -0.51
NPLOC4-210ENST00000572824 TXNRD3Q86VQ6 643 aa11.87□□□□□ -0.51
NPLOC4-210ENST00000572824 SPNS2Q8IVW8 549 aa11.87□□□□□ -0.51
NPLOC4-210ENST00000572824 CCDC191Q8NCU4 936 aa11.87□□□□□ -0.51
NPLOC4-210ENST00000572824 VPS33BQ9H267 617 aa11.87□□□□□ -0.51
NPLOC4-210ENST00000572824 MRS2Q9HD23 443 aa11.87□□□□□ -0.51
NPLOC4-210ENST00000572824 PGAP2Q9UHJ9 254 aa11.87□□□□□ -0.51
NPLOC4-210ENST00000572824 PCDHGC3Q9UN70 934 aa11.87□□□□□ -0.51
NPLOC4-210ENST00000572824 F6X3S4 739 aa11.86□□□□□ -0.51
NPLOC4-210ENST00000572824 TNIP1Q15025 636 aa11.86□□□□□ -0.51
NPLOC4-210ENST00000572824 PUS10Q3MIT2 529 aaKnown RBP11.86□□□□□ -0.51
NPLOC4-210ENST00000572824 MORN1Q5T089 497 aa11.86□□□□□ -0.51
NPLOC4-210ENST00000572824 CCDC30Q5VVM6 783 aa11.86□□□□□ -0.51
NPLOC4-210ENST00000572824 KSR2Q6VAB6 950 aa11.86□□□□□ -0.51
NPLOC4-210ENST00000572824 TMC4Q7Z404 712 aa11.86□□□□□ -0.51
NPLOC4-210ENST00000572824 TTLL11Q8NHH1 800 aa11.86□□□□□ -0.51
NPLOC4-210ENST00000572824 ANKIB1Q9P2G1 1089 aa11.86□□□□□ -0.51
NPLOC4-210ENST00000572824 CDHR2Q9BYE9 1310 aa11.86□□□□□ -0.51
NPLOC4-210ENST00000572824 CTCFP49711 727 aaPredicted RBP11.85□□□□□ -0.51
NPLOC4-210ENST00000572824 PTPN5P54829 565 aa11.85□□□□□ -0.51
NPLOC4-210ENST00000572824 CASP7P55210 303 aa11.85□□□□□ -0.51
NPLOC4-210ENST00000572824 CSPP1Q1MSJ5 1256 aa11.85□□□□□ -0.51
NPLOC4-210ENST00000572824 KIF4BQ2VIQ3 1234 aa11.85□□□□□ -0.51
NPLOC4-210ENST00000572824 CCDC152Q4G0S7 254 aa11.85□□□□□ -0.51
NPLOC4-210ENST00000572824 AIDAQ96BJ3 306 aa11.85□□□□□ -0.51
NPLOC4-210ENST00000572824 GGA3Q9NZ52 723 aa11.85□□□□□ -0.51
NPLOC4-210ENST00000572824 PODXL2Q9NZ53 605 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms