RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 HOOK2Q96ED9 719 aa6.11□□□□□ -1.43
TOPBP1-210ENST00000572787 SHDQ96IW2 340 aa6.11□□□□□ -1.43
TOPBP1-210ENST00000572787 FMNL2Q96PY5 1086 aa6.11□□□□□ -1.43
TOPBP1-210ENST00000572787 RTFDC1Q9BY42 306 aaPredicted RBP6.11□□□□□ -1.43
TOPBP1-210ENST00000572787 ZNF358Q9NW07 568 aa6.11□□□□□ -1.43
TOPBP1-210ENST00000572787 MAP10Q9P2G4 905 aa6.11□□□□□ -1.43
TOPBP1-210ENST00000572787 ZNF180Q9UJW8 692 aa6.11□□□□□ -1.43
TOPBP1-210ENST00000572787 SPEF1Q9Y4P9 236 aa6.11□□□□□ -1.43
TOPBP1-210ENST00000572787 KDM4FA0A1W2PPD8 638 aa6.1□□□□□ -1.43
TOPBP1-210ENST00000572787 IRS4O14654 1257 aaPredicted RBP6.1□□□□□ -1.43
TOPBP1-210ENST00000572787 DIAPH1O60610 1272 aaKnown RBP6.1□□□□□ -1.43
TOPBP1-210ENST00000572787 RFPL3O75679 317 aa6.1□□□□□ -1.43
TOPBP1-210ENST00000572787 PCSK2P16519 638 aa6.1□□□□□ -1.43
TOPBP1-210ENST00000572787 ATICP31939 592 aa6.1□□□□□ -1.43
TOPBP1-210ENST00000572787 CASP7P55210 303 aa6.1□□□□□ -1.43
TOPBP1-210ENST00000572787 TOMM20Q15388 145 aa6.1□□□□□ -1.43
TOPBP1-210ENST00000572787 FXNQ16595 210 aa6.1□□□□□ -1.43
TOPBP1-210ENST00000572787 GJC2Q5T442 439 aaPredicted RBP6.1□□□□□ -1.43
TOPBP1-210ENST00000572787 NBPF14Q5TI25 921 aa6.1□□□□□ -1.43
TOPBP1-210ENST00000572787 JAKMIP3Q5VZ66 844 aa6.1□□□□□ -1.43
TOPBP1-210ENST00000572787 ZBTB33Q86T24 672 aa6.1□□□□□ -1.43
TOPBP1-210ENST00000572787 ATCAYQ86WG3 371 aa6.1□□□□□ -1.43
TOPBP1-210ENST00000572787 UBR7Q8N806 425 aa6.1□□□□□ -1.43
TOPBP1-210ENST00000572787 ZNF296Q8WUU4 475 aaPredicted RBP6.1□□□□□ -1.43
TOPBP1-210ENST00000572787 CHMP7Q8WUX9 453 aaPredicted RBP6.1□□□□□ -1.43
TOPBP1-210ENST00000572787 EDEM1Q92611 657 aa6.1□□□□□ -1.43
TOPBP1-210ENST00000572787 NUDT12Q9BQG2 462 aa6.1□□□□□ -1.43
TOPBP1-210ENST00000572787 ARHGAP9Q9BRR9 750 aa6.1□□□□□ -1.43
TOPBP1-210ENST00000572787 PLCB1Q9NQ66 1216 aa6.1□□□□□ -1.43
TOPBP1-210ENST00000572787 ACAD8Q9UKU7 415 aa6.1□□□□□ -1.43
TOPBP1-210ENST00000572787 ISY1Q9ULR0 285 aaKnown RBP6.1□□□□□ -1.43
TOPBP1-210ENST00000572787 SLC45A1Q9Y2W3 748 aa6.1□□□□□ -1.43
TOPBP1-210ENST00000572787 IPPQ9Y573 584 aa6.1□□□□□ -1.43
TOPBP1-210ENST00000572787 PRSS47A8MTI9 375 aa6.09□□□□□ -1.43
TOPBP1-210ENST00000572787 VSTM5A8MXK1 200 aa6.09□□□□□ -1.43
TOPBP1-210ENST00000572787 MINDY4BA8MYZ0 360 aa6.09□□□□□ -1.43
TOPBP1-210ENST00000572787 BACH1O14867 736 aa6.09□□□□□ -1.43
TOPBP1-210ENST00000572787 ZBTB39O15060 712 aa6.09□□□□□ -1.43
TOPBP1-210ENST00000572787 PDGFAP04085 211 aa6.09□□□□□ -1.43
TOPBP1-210ENST00000572787 EIF5P55010 431 aaKnown RBP6.09□□□□□ -1.43
TOPBP1-210ENST00000572787 GPSM2P81274 684 aa6.09□□□□□ -1.43
TOPBP1-210ENST00000572787 SSRP1Q08945 709 aaKnown RBP6.09□□□□□ -1.43
TOPBP1-210ENST00000572787 TAF11Q15544 211 aa6.09□□□□□ -1.43
TOPBP1-210ENST00000572787 NBPF20Q3BBV1 942 aa6.09□□□□□ -1.43
TOPBP1-210ENST00000572787 TMEM67Q5HYA8 995 aa6.09□□□□□ -1.43
TOPBP1-210ENST00000572787 DACT2Q5SW24 774 aa6.09□□□□□ -1.43
TOPBP1-210ENST00000572787 C1orf53Q5VUE5 145 aa6.09□□□□□ -1.43
TOPBP1-210ENST00000572787 TSHZ3Q63HK5 1081 aa6.09□□□□□ -1.43
TOPBP1-210ENST00000572787 MZT2AQ6P582 158 aa6.09□□□□□ -1.43
TOPBP1-210ENST00000572787 CFAP161Q6P656 301 aa6.09□□□□□ -1.43
TOPBP1-210ENST00000572787 RASSF3Q86WH2 238 aa6.09□□□□□ -1.43
TOPBP1-210ENST00000572787 CLASRPQ8N2M8 674 aaKnown RBP6.09□□□□□ -1.43
TOPBP1-210ENST00000572787 CHCHD4Q8N4Q1 142 aa6.09□□□□□ -1.43
TOPBP1-210ENST00000572787 GOLGA1Q92805 767 aa6.09□□□□□ -1.43
TOPBP1-210ENST00000572787 WNT2BQ93097 391 aa6.09□□□□□ -1.43
TOPBP1-210ENST00000572787 TRIM52Q96A61 297 aa6.09□□□□□ -1.43
TOPBP1-210ENST00000572787 ZNF669Q96BR6 464 aaPredicted RBP6.09□□□□□ -1.43
TOPBP1-210ENST00000572787 CDK5RAP3Q96JB5 506 aa6.09□□□□□ -1.43
TOPBP1-210ENST00000572787 SERINC2Q96SA4 455 aa6.09□□□□□ -1.43
TOPBP1-210ENST00000572787 SMAD5Q99717 465 aaKnown RBP6.09□□□□□ -1.43
TOPBP1-210ENST00000572787 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.09□□□□□ -1.43
TOPBP1-210ENST00000572787 ABCF2Q9UG63 623 aa6.09□□□□□ -1.43
TOPBP1-210ENST00000572787 WASHC2AQ641Q2 1341 aa6.08□□□□□ -1.44
TOPBP1-210ENST00000572787 GSG1L2A8MUP6 293 aa6.08□□□□□ -1.44
TOPBP1-210ENST00000572787 POTECB2RU33 542 aa6.08□□□□□ -1.44
TOPBP1-210ENST00000572787 C9IYK1 514 aa6.08□□□□□ -1.44
TOPBP1-210ENST00000572787 PIP5K1CO60331 668 aa6.08□□□□□ -1.44
TOPBP1-210ENST00000572787 MTA2O94776 668 aa6.08□□□□□ -1.44
TOPBP1-210ENST00000572787 TGFB3P10600 412 aa6.08□□□□□ -1.44
TOPBP1-210ENST00000572787 COL9A1P20849 921 aa6.08□□□□□ -1.44
TOPBP1-210ENST00000572787 GBP2P32456 591 aaPredicted RBP6.08□□□□□ -1.44
TOPBP1-210ENST00000572787 CCT5P48643 541 aa6.08□□□□□ -1.44
TOPBP1-210ENST00000572787 ZNF280AP59817 542 aaPredicted RBP6.08□□□□□ -1.44
TOPBP1-210ENST00000572787 ITKQ08881 620 aa6.08□□□□□ -1.44
TOPBP1-210ENST00000572787 CHAF1AQ13111 956 aaPredicted RBP6.08□□□□□ -1.44
TOPBP1-210ENST00000572787 MTMR1Q13613 665 aa6.08□□□□□ -1.44
TOPBP1-210ENST00000572787 PTPRNQ16849 979 aa6.08□□□□□ -1.44
TOPBP1-210ENST00000572787 WDR45BQ5MNZ6 344 aa6.08□□□□□ -1.44
TOPBP1-210ENST00000572787 STAG2Q8N3U4 1231 aa6.08□□□□□ -1.44
TOPBP1-210ENST00000572787 KIAA1958Q8N8K9 716 aa6.08□□□□□ -1.44
TOPBP1-210ENST00000572787 TTC16Q8NEE8 873 aa6.08□□□□□ -1.44
TOPBP1-210ENST00000572787 JPH3Q8WXH2 748 aaPredicted RBP6.08□□□□□ -1.44
TOPBP1-210ENST00000572787 MTMR8Q96EF0 704 aa6.08□□□□□ -1.44
TOPBP1-210ENST00000572787 TMEM74Q96NL1 305 aa6.08□□□□□ -1.44
TOPBP1-210ENST00000572787 MYCBPQ99417 103 aaPredicted RBP6.08□□□□□ -1.44
TOPBP1-210ENST00000572787 FBRSQ9HAH7 460 aa6.08□□□□□ -1.44
TOPBP1-210ENST00000572787 RIC8AQ9NPQ8 531 aa6.08□□□□□ -1.44
TOPBP1-210ENST00000572787 KCNQ5Q9NR82 932 aa6.08□□□□□ -1.44
TOPBP1-210ENST00000572787 SLC5A4Q9NY91 659 aa6.08□□□□□ -1.44
TOPBP1-210ENST00000572787 PFDN2Q9UHV9 154 aa6.08□□□□□ -1.44
TOPBP1-210ENST00000572787 DIS3Q9Y2L1 958 aaKnown RBP6.08□□□□□ -1.44
TOPBP1-210ENST00000572787 MORC2Q9Y6X9 1032 aaPredicted RBP6.08□□□□□ -1.44
TOPBP1-210ENST00000572787 PHLDB1Q86UU1 1377 aa6.07□□□□□ -1.44
TOPBP1-210ENST00000572787 FAM170AA1A519 330 aa6.07□□□□□ -1.44
TOPBP1-210ENST00000572787 PRPF3O43395 683 aaKnown RBP6.07□□□□□ -1.44
TOPBP1-210ENST00000572787 EYA4O95677 639 aa6.07□□□□□ -1.44
TOPBP1-210ENST00000572787 RLBP1P12271 317 aa6.07□□□□□ -1.44
TOPBP1-210ENST00000572787 ZSCAN20P17040 1043 aaPredicted RBP6.07□□□□□ -1.44
TOPBP1-210ENST00000572787 EIF6P56537 245 aaKnown RBP6.07□□□□□ -1.44
TOPBP1-210ENST00000572787 NUCB1Q02818 461 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms