RNA–Protein interactions for RNA: ENST00000568993.5

SNX20-204, Transcript of sorting nexin 20, humanhuman

TSL 1 (best)

Gene SNX20, Length 2,003 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-204ENST00000568993 POLRMTO00411 1230 aaKnown RBP18.37■□□□□ 0.53
SNX20-204ENST00000568993 F13A1P00488 732 aa18.37■□□□□ 0.53
SNX20-204ENST00000568993 APPP05067 770 aa18.37■□□□□ 0.53
SNX20-204ENST00000568993 RXRBP28702 533 aa18.37■□□□□ 0.53
SNX20-204ENST00000568993 ATP6V1DQ9Y5K8 247 aa18.37■□□□□ 0.53
SNX20-204ENST00000568993 MYH13Q9UKX3 1938 aa18.37■□□□□ 0.53
SNX20-204ENST00000568993 GSG1L2A8MUP6 293 aa18.37■□□□□ 0.53
SNX20-204ENST00000568993 PRPF40AO75400 957 aaKnown RBP18.37■□□□□ 0.53
SNX20-204ENST00000568993 KLRK1P26718 216 aa18.37■□□□□ 0.53
SNX20-204ENST00000568993 HOXA10P31260 410 aaPredicted RBP18.37■□□□□ 0.53
SNX20-204ENST00000568993 DDR1Q08345 913 aa18.37■□□□□ 0.53
SNX20-204ENST00000568993 STK3Q13188 491 aa18.37■□□□□ 0.53
SNX20-204ENST00000568993 C15orf52Q6ZUT6 534 aaKnown RBP18.37■□□□□ 0.53
SNX20-204ENST00000568993 ARMT1Q9H993 441 aa18.37■□□□□ 0.53
SNX20-204ENST00000568993 EPB41L4AQ9HCS5 686 aaPredicted RBP18.37■□□□□ 0.53
SNX20-204ENST00000568993 DDX49Q9Y6V7 483 aaKnown RBP18.37■□□□□ 0.53
SNX20-204ENST00000568993 IGSF3O75054 1194 aa18.36■□□□□ 0.53
SNX20-204ENST00000568993 APOBRQ0VD83 1088 aa18.36■□□□□ 0.53
SNX20-204ENST00000568993 SCRN1Q12765 414 aa18.36■□□□□ 0.53
SNX20-204ENST00000568993 LARP1BQ659C4 914 aaKnown RBP18.36■□□□□ 0.53
SNX20-204ENST00000568993 RALYLQ86SE5 291 aaKnown RBP18.36■□□□□ 0.53
SNX20-204ENST00000568993 SMARCC2Q8TAQ2 1214 aa18.36■□□□□ 0.53
SNX20-204ENST00000568993 RPGRQ92834 1020 aaKnown RBP18.36■□□□□ 0.53
SNX20-204ENST00000568993 APBA3O96018 575 aa18.35■□□□□ 0.53
SNX20-204ENST00000568993 CYP7A1P22680 504 aa18.35■□□□□ 0.53
SNX20-204ENST00000568993 LCORLQ8N3X6 602 aa18.35■□□□□ 0.53
SNX20-204ENST00000568993 RAI14Q9P0K7 980 aa18.35■□□□□ 0.53
SNX20-204ENST00000568993 ABCF2Q9UG63 623 aa18.35■□□□□ 0.53
SNX20-204ENST00000568993 XDHP47989 1333 aa18.35■□□□□ 0.53
SNX20-204ENST00000568993 PRC1O43663 620 aa18.35■□□□□ 0.53
SNX20-204ENST00000568993 PDIA3P30101 505 aaKnown RBP18.35■□□□□ 0.53
SNX20-204ENST00000568993 ANTXR2P58335 489 aa18.35■□□□□ 0.53
SNX20-204ENST00000568993 TRDNQ13061 729 aa18.35■□□□□ 0.53
SNX20-204ENST00000568993 ZNF827Q17R98 1081 aa18.35■□□□□ 0.53
SNX20-204ENST00000568993 TMEM87AQ8NBN3 555 aa18.35■□□□□ 0.53
SNX20-204ENST00000568993 RBM17Q96I25 401 aaKnown RBP18.35■□□□□ 0.53
SNX20-204ENST00000568993 CHAMP1Q96JM3 812 aa18.35■□□□□ 0.53
SNX20-204ENST00000568993 GZF1Q9H116 711 aaPredicted RBP18.35■□□□□ 0.53
SNX20-204ENST00000568993 TCHHQ07283 1943 aa18.35■□□□□ 0.53
SNX20-204ENST00000568993 TBC1D10CQ8IV04 446 aa18.34■□□□□ 0.53
SNX20-204ENST00000568993 FLAD1Q8NFF5 587 aa18.34■□□□□ 0.53
SNX20-204ENST00000568993 NACAP1Q9BZK3 213 aa18.34■□□□□ 0.53
SNX20-204ENST00000568993 NAPBQ9H115 298 aa18.34■□□□□ 0.53
SNX20-204ENST00000568993 TFCP2L1Q9NZI6 479 aa18.34■□□□□ 0.53
SNX20-204ENST00000568993 TIAM2Q8IVF5 1701 aa18.34■□□□□ 0.53
SNX20-204ENST00000568993 RGPD3A6NKT7 1758 aaPredicted RBP18.34■□□□□ 0.53
SNX20-204ENST00000568993 RGPD4Q7Z3J3 1758 aa18.34■□□□□ 0.53
SNX20-204ENST00000568993 FSD2A1L4K1 749 aa18.33■□□□□ 0.53
SNX20-204ENST00000568993 BBOX1O75936 387 aa18.33■□□□□ 0.53
SNX20-204ENST00000568993 CHST3Q7LGC8 479 aa18.33■□□□□ 0.53
SNX20-204ENST00000568993 ADGRA1Q86SQ6 560 aa18.33■□□□□ 0.53
SNX20-204ENST00000568993 NLGN1Q8N2Q7 840 aa18.33■□□□□ 0.53
SNX20-204ENST00000568993 ISY1Q9ULR0 285 aaKnown RBP18.33■□□□□ 0.53
SNX20-204ENST00000568993 SLC4A4Q9Y6R1 1079 aa18.33■□□□□ 0.53
SNX20-204ENST00000568993 NRXN2Q9P2S2 1712 aa18.33■□□□□ 0.53
SNX20-204ENST00000568993 TXNRD3Q86VQ6 643 aa18.33■□□□□ 0.52
SNX20-204ENST00000568993 CRAMP1Q96RY5 1269 aa18.33■□□□□ 0.52
SNX20-204ENST00000568993 RIOK1Q9BRS2 568 aaKnown RBP18.33■□□□□ 0.52
SNX20-204ENST00000568993 ANKIB1Q9P2G1 1089 aa18.33■□□□□ 0.52
SNX20-204ENST00000568993 CHD4Q14839 1912 aa18.33■□□□□ 0.52
SNX20-204ENST00000568993 MAGEB6P1A0A0J9YX57 407 aa18.32■□□□□ 0.52
SNX20-204ENST00000568993 NSUN7Q8NE18 718 aaKnown RBP18.32■□□□□ 0.52
SNX20-204ENST00000568993 ZNF384Q8TF68 577 aa18.32■□□□□ 0.52
SNX20-204ENST00000568993 TNS1Q9HBL0 1735 aaKnown RBP18.32■□□□□ 0.52
SNX20-204ENST00000568993 PRKAB2O43741 272 aa18.32■□□□□ 0.52
SNX20-204ENST00000568993 JAK2O60674 1132 aa18.32■□□□□ 0.52
SNX20-204ENST00000568993 HMGN5P82970 282 aaKnown RBP18.32■□□□□ 0.52
SNX20-204ENST00000568993 NAA16Q6N069 864 aaPredicted RBP18.32■□□□□ 0.52
SNX20-204ENST00000568993 COL23A1Q86Y22 540 aaPredicted RBP18.32■□□□□ 0.52
SNX20-204ENST00000568993 MIGA1Q8NAN2 632 aa18.32■□□□□ 0.52
SNX20-204ENST00000568993 GPT2Q8TD30 523 aa18.32■□□□□ 0.52
SNX20-204ENST00000568993 NSUN4Q96CB9 384 aaKnown RBP18.32■□□□□ 0.52
SNX20-204ENST00000568993 SALL1Q9NSC2 1324 aa18.32■□□□□ 0.52
SNX20-204ENST00000568993 CTDNEP1O95476 244 aa18.31■□□□□ 0.52
SNX20-204ENST00000568993 MBD3O95983 291 aa18.31■□□□□ 0.52
SNX20-204ENST00000568993 CNNM2Q9H8M5 875 aa18.31■□□□□ 0.52
SNX20-204ENST00000568993 VPS37CA5D8V6 355 aaPredicted RBP18.3■□□□□ 0.52
SNX20-204ENST00000568993 DTNBO60941 627 aa18.3■□□□□ 0.52
SNX20-204ENST00000568993 CCDC88AQ3V6T2 1871 aa18.3■□□□□ 0.52
SNX20-204ENST00000568993 MAST2Q6P0Q8 1798 aa18.3■□□□□ 0.52
SNX20-204ENST00000568993 TMC4Q7Z404 712 aa18.3■□□□□ 0.52
SNX20-204ENST00000568993 TDRD7Q8NHU6 1098 aaKnown RBP18.3■□□□□ 0.52
SNX20-204ENST00000568993 TMEM87BQ96K49 555 aa18.3■□□□□ 0.52
SNX20-204ENST00000568993 GPHNQ9NQX3 736 aaPredicted RBP18.3■□□□□ 0.52
SNX20-204ENST00000568993 ATP2B4P23634 1241 aa18.3■□□□□ 0.52
SNX20-204ENST00000568993 AKNAD1Q5T1N1 836 aa18.3■□□□□ 0.52
SNX20-204ENST00000568993 STAG1Q8WVM7 1258 aa18.3■□□□□ 0.52
SNX20-204ENST00000568993 BRIP1Q9BX63 1249 aa18.3■□□□□ 0.52
SNX20-204ENST00000568993 ANAPC4Q9UJX5 808 aa18.3■□□□□ 0.52
SNX20-204ENST00000568993 BRPF3Q9ULD4 1205 aa18.3■□□□□ 0.52
SNX20-204ENST00000568993 KIAA1551Q9HCM1 1747 aa18.29■□□□□ 0.52
SNX20-204ENST00000568993 TDO2P48775 406 aa18.29■□□□□ 0.52
SNX20-204ENST00000568993 GPSM2P81274 684 aa18.29■□□□□ 0.52
SNX20-204ENST00000568993 MECOMQ03112 1051 aa18.29■□□□□ 0.52
SNX20-204ENST00000568993 SPTY2D1Q68D10 685 aaPredicted RBP18.29■□□□□ 0.52
SNX20-204ENST00000568993 GIMAP6Q6P9H5 292 aa18.29■□□□□ 0.52
SNX20-204ENST00000568993 CYB5R4Q7L1T6 521 aa18.29■□□□□ 0.52
SNX20-204ENST00000568993 CDC37L1Q7L3B6 337 aa18.29■□□□□ 0.52
SNX20-204ENST00000568993 USP48Q86UV5 1035 aa18.29■□□□□ 0.52
SNX20-204ENST00000568993 ANGEL1Q9UNK9 670 aaKnown RBP18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms