RNA–Protein interactions for RNA: ENST00000568340.5

CDH11-214, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 514 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-214ENST00000568340 RBM19Q9Y4C8 960 aaKnown RBP12.48□□□□□ -0.41
CDH11-214ENST00000568340 TIAM2Q8IVF5 1701 aa12.48□□□□□ -0.41
CDH11-214ENST00000568340 PPIP5K2O43314 1243 aa12.47□□□□□ -0.41
CDH11-214ENST00000568340 REC8O95072 547 aa12.47□□□□□ -0.41
CDH11-214ENST00000568340 HSPA4P34932 840 aa12.47□□□□□ -0.41
CDH11-214ENST00000568340 IARSP41252 1262 aaKnown RBP12.47□□□□□ -0.41
CDH11-214ENST00000568340 MAP3K12Q12852 859 aa12.47□□□□□ -0.41
CDH11-214ENST00000568340 RUFY2Q8WXA3 655 aa12.47□□□□□ -0.41
CDH11-214ENST00000568340 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.47□□□□□ -0.41
CDH11-214ENST00000568340 TAOK3Q9H2K8 898 aa12.47□□□□□ -0.41
CDH11-214ENST00000568340 EPB41L4AQ9HCS5 686 aaPredicted RBP12.47□□□□□ -0.41
CDH11-214ENST00000568340 PALD1Q9ULE6 856 aa12.47□□□□□ -0.41
CDH11-214ENST00000568340 BCS1LQ9Y276 419 aa12.47□□□□□ -0.41
CDH11-214ENST00000568340 SUGT1Q9Y2Z0 365 aa12.47□□□□□ -0.41
CDH11-214ENST00000568340 LAMA4Q16363 1823 aa12.46□□□□□ -0.41
CDH11-214ENST00000568340 ZMYM6O95789 1325 aa12.46□□□□□ -0.41
CDH11-214ENST00000568340 GPAA1O43292 621 aa12.46□□□□□ -0.41
CDH11-214ENST00000568340 YBX3P16989 372 aaKnown RBP eCLIP12.46□□□□□ -0.41
CDH11-214ENST00000568340 GTF2IP78347 998 aa12.46□□□□□ -0.41
CDH11-214ENST00000568340 RASSF7Q02833 373 aa12.46□□□□□ -0.41
CDH11-214ENST00000568340 NECTIN1Q15223 517 aa12.46□□□□□ -0.41
CDH11-214ENST00000568340 MFSD14BQ5SR56 506 aa12.46□□□□□ -0.41
CDH11-214ENST00000568340 STRIP1Q5VSL9 837 aa12.46□□□□□ -0.41
CDH11-214ENST00000568340 ZSCAN25Q6NSZ9 544 aa12.46□□□□□ -0.41
CDH11-214ENST00000568340 KLHL34Q8N239 644 aa12.46□□□□□ -0.41
CDH11-214ENST00000568340 TBC1D22AQ8WUA7 517 aa12.46□□□□□ -0.41
CDH11-214ENST00000568340 FAM163AQ96GL9 167 aaPredicted RBP12.46□□□□□ -0.41
CDH11-214ENST00000568340 STRBPQ96SI9 672 aaKnown RBP12.46□□□□□ -0.41
CDH11-214ENST00000568340 GMLQ99445 158 aa12.46□□□□□ -0.41
CDH11-214ENST00000568340 DSCC1Q9BVC3 393 aa12.46□□□□□ -0.41
CDH11-214ENST00000568340 MXD3Q9BW11 206 aa12.46□□□□□ -0.41
CDH11-214ENST00000568340 C22orf23Q9BZE7 217 aa12.46□□□□□ -0.41
CDH11-214ENST00000568340 TMX4Q9H1E5 349 aaPredicted RBP12.46□□□□□ -0.41
CDH11-214ENST00000568340 ANO2Q9NQ90 1003 aa12.46□□□□□ -0.41
CDH11-214ENST00000568340 TAF6LQ9Y6J9 622 aa12.46□□□□□ -0.41
CDH11-214ENST00000568340 RPAP1Q9BWH6 1393 aaPredicted RBP12.45□□□□□ -0.42
CDH11-214ENST00000568340 CCDC88AQ3V6T2 1871 aa12.45□□□□□ -0.42
CDH11-214ENST00000568340 HSPD1P10809 573 aaKnown RBP12.45□□□□□ -0.42
CDH11-214ENST00000568340 LRRFIP1Q32MZ4 808 aaKnown RBP12.45□□□□□ -0.42
CDH11-214ENST00000568340 ERICH6Q7L0X2 663 aa12.45□□□□□ -0.42
CDH11-214ENST00000568340 LCORLQ8N3X6 602 aa12.45□□□□□ -0.42
CDH11-214ENST00000568340 ZGPATQ8N5A5 531 aaKnown RBP12.45□□□□□ -0.42
CDH11-214ENST00000568340 ABCF2Q9UG63 623 aa12.45□□□□□ -0.42
CDH11-214ENST00000568340 MROH7-TTC4A0A0A0MT08 1334 aa12.44□□□□□ -0.42
CDH11-214ENST00000568340 EIF5BO60841 1220 aaKnown RBP12.44□□□□□ -0.42
CDH11-214ENST00000568340 MBD4O95243 580 aa12.44□□□□□ -0.42
CDH11-214ENST00000568340 COL9A3Q14050 684 aaPredicted RBP12.44□□□□□ -0.42
CDH11-214ENST00000568340 DIXDC1Q155Q3 683 aa12.44□□□□□ -0.42
CDH11-214ENST00000568340 RASEFQ8IZ41 740 aa12.44□□□□□ -0.42
CDH11-214ENST00000568340 NBPF3Q9H094 633 aa12.44□□□□□ -0.42
CDH11-214ENST00000568340 LRP2BPQ9P2M1 347 aa12.44□□□□□ -0.42
CDH11-214ENST00000568340 MKRN1Q9UHC7 482 aaKnown RBP12.44□□□□□ -0.42
CDH11-214ENST00000568340 RBM8AQ9Y5S9 174 aaKnown RBP12.44□□□□□ -0.42
CDH11-214ENST00000568340 DICER1Q9UPY3 1922 aaKnown RBP12.43□□□□□ -0.42
CDH11-214ENST00000568340 SBF1O95248 1867 aa12.43□□□□□ -0.42
CDH11-214ENST00000568340 CDK5RAP2Q96SN8 1893 aa12.43□□□□□ -0.42
CDH11-214ENST00000568340 USP17L3A6NCW0 530 aa12.43□□□□□ -0.42
CDH11-214ENST00000568340 USP17L4A6NCW7 530 aa12.43□□□□□ -0.42
CDH11-214ENST00000568340 LDHBP07195 334 aaKnown RBP12.43□□□□□ -0.42
CDH11-214ENST00000568340 VIL1P09327 827 aaKnown RBP12.43□□□□□ -0.42
CDH11-214ENST00000568340 CYP7A1P22680 504 aa12.43□□□□□ -0.42
CDH11-214ENST00000568340 RHBDL3P58872 404 aa12.43□□□□□ -0.42
CDH11-214ENST00000568340 PPP4CP60510 307 aa12.43□□□□□ -0.42
CDH11-214ENST00000568340 SPTY2D1Q68D10 685 aaPredicted RBP12.43□□□□□ -0.42
CDH11-214ENST00000568340 TTLL5Q6EMB2 1281 aa12.43□□□□□ -0.42
CDH11-214ENST00000568340 NAA16Q6N069 864 aaPredicted RBP12.43□□□□□ -0.42
CDH11-214ENST00000568340 USP17L1Q7RTZ2 530 aa12.43□□□□□ -0.42
CDH11-214ENST00000568340 ARMT1Q9H993 441 aa12.43□□□□□ -0.42
CDH11-214ENST00000568340 RAI14Q9P0K7 980 aa12.43□□□□□ -0.42
CDH11-214ENST00000568340 ZNRF3Q9ULT6 936 aa12.43□□□□□ -0.42
CDH11-214ENST00000568340 FOCADQ5VW36 1801 aa12.42□□□□□ -0.42
CDH11-214ENST00000568340 GPR75-ASB3A0A0A6YYF3 556 aa12.42□□□□□ -0.42
CDH11-214ENST00000568340 GSG1L2A8MUP6 293 aa12.42□□□□□ -0.42
CDH11-214ENST00000568340 FZD9O00144 591 aa12.42□□□□□ -0.42
CDH11-214ENST00000568340 SLC27A2O14975 620 aa12.42□□□□□ -0.42
CDH11-214ENST00000568340 PRKAB2O43741 272 aa12.42□□□□□ -0.42
CDH11-214ENST00000568340 FRAT2O75474 233 aaPredicted RBP12.42□□□□□ -0.42
CDH11-214ENST00000568340 ANAPC15P60006 121 aa12.42□□□□□ -0.42
CDH11-214ENST00000568340 DYNLL1P63167 89 aaKnown RBP12.42□□□□□ -0.42
CDH11-214ENST00000568340 ALX1Q15699 326 aa12.42□□□□□ -0.42
CDH11-214ENST00000568340 TSGA10IPQ3SY00 556 aa12.42□□□□□ -0.42
CDH11-214ENST00000568340 LARGE2Q8N3Y3 721 aa12.42□□□□□ -0.42
CDH11-214ENST00000568340 MIGA1Q8NAN2 632 aa12.42□□□□□ -0.42
CDH11-214ENST00000568340 DAGLAQ9Y4D2 1042 aa12.42□□□□□ -0.42
CDH11-214ENST00000568340 MYH2Q9UKX2 1941 aa12.41□□□□□ -0.42
CDH11-214ENST00000568340 PSMD14O00487 310 aa12.41□□□□□ -0.42
CDH11-214ENST00000568340 CYP21A2P08686 494 aa12.41□□□□□ -0.42
CDH11-214ENST00000568340 CXCL9Q07325 125 aa12.41□□□□□ -0.42
CDH11-214ENST00000568340 CREB3L3Q68CJ9 461 aa12.41□□□□□ -0.42
CDH11-214ENST00000568340 STOX1Q6ZVD7 989 aa12.41□□□□□ -0.42
CDH11-214ENST00000568340 DZIP1Q86YF9 867 aaKnown RBP12.41□□□□□ -0.42
CDH11-214ENST00000568340 MRIQ9BWK5 157 aa12.41□□□□□ -0.42
CDH11-214ENST00000568340 SNX14Q9Y5W7 946 aa12.41□□□□□ -0.42
CDH11-214ENST00000568340 LAMB1P07942 1786 aa12.41□□□□□ -0.42
CDH11-214ENST00000568340 ZNF541Q9H0D2 1346 aa12.4□□□□□ -0.42
CDH11-214ENST00000568340 C1QTNF8P60827 252 aa12.4□□□□□ -0.42
CDH11-214ENST00000568340 HDLBPQ00341 1268 aaKnown RBP12.4□□□□□ -0.42
CDH11-214ENST00000568340 APOBEC3HQ6NTF7 200 aaKnown RBP12.4□□□□□ -0.42
CDH11-214ENST00000568340 RSBN1LQ6PCB5 846 aaPredicted RBP12.4□□□□□ -0.42
CDH11-214ENST00000568340 NIM1KQ8IY84 436 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms