RNA–Protein interactions for RNA: ENST00000567320.1

CDH1-211, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 352 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-211ENST00000567320 SERPINB4P48594 390 aa6.67□□□□□ -1.34
CDH1-211ENST00000567320 SOX4Q06945 474 aaPredicted RBP6.67□□□□□ -1.34
CDH1-211ENST00000567320 CDPF1Q6NVV7 123 aa6.67□□□□□ -1.34
CDH1-211ENST00000567320 EHD4Q9H223 541 aa6.67□□□□□ -1.34
CDH1-211ENST00000567320 EGFL7Q9UHF1 273 aa6.67□□□□□ -1.34
CDH1-211ENST00000567320 ANGEL1Q9UNK9 670 aaKnown RBP6.67□□□□□ -1.34
CDH1-211ENST00000567320 USTQ9Y2C2 406 aa6.67□□□□□ -1.34
CDH1-211ENST00000567320 COL17A1Q9UMD9 1497 aaPredicted RBP6.66□□□□□ -1.34
CDH1-211ENST00000567320 ADAMTS4O75173 837 aa6.66□□□□□ -1.34
CDH1-211ENST00000567320 SPINK2P20155 84 aa6.66□□□□□ -1.34
CDH1-211ENST00000567320 RAB6AP20340 208 aa6.66□□□□□ -1.34
CDH1-211ENST00000567320 HOXA10P31260 410 aaPredicted RBP6.66□□□□□ -1.34
CDH1-211ENST00000567320 GRIA4P48058 902 aa6.66□□□□□ -1.34
CDH1-211ENST00000567320 POU4F3Q15319 338 aa6.66□□□□□ -1.34
CDH1-211ENST00000567320 AKAP4Q5JQC9 854 aa6.66□□□□□ -1.34
CDH1-211ENST00000567320 HP1BP3Q5SSJ5 553 aaPredicted RBP6.66□□□□□ -1.34
CDH1-211ENST00000567320 USPL1Q5W0Q7 1092 aa6.66□□□□□ -1.34
CDH1-211ENST00000567320 DYMQ7RTS9 669 aa6.66□□□□□ -1.34
CDH1-211ENST00000567320 DTX1Q86Y01 620 aa6.66□□□□□ -1.34
CDH1-211ENST00000567320 CCNJLQ8IV13 435 aa6.66□□□□□ -1.34
CDH1-211ENST00000567320 GALNT12Q8IXK2 581 aa6.66□□□□□ -1.34
CDH1-211ENST00000567320 TBC1D32Q96NH3 1257 aa6.66□□□□□ -1.34
CDH1-211ENST00000567320 CORO1BQ9BR76 489 aa6.66□□□□□ -1.34
CDH1-211ENST00000567320 F13BP05160 661 aa6.65□□□□□ -1.34
CDH1-211ENST00000567320 TAL1P17542 331 aaPredicted RBP6.65□□□□□ -1.34
CDH1-211ENST00000567320 PDE3BQ13370 1112 aa6.65□□□□□ -1.34
CDH1-211ENST00000567320 ZNF423Q2M1K9 1284 aa6.65□□□□□ -1.34
CDH1-211ENST00000567320 C2CD4AQ8NCU7 369 aaPredicted RBP6.65□□□□□ -1.34
CDH1-211ENST00000567320 ZFYVE1Q9HBF4 777 aa6.65□□□□□ -1.34
CDH1-211ENST00000567320 AP4E1Q9UPM8 1137 aa6.65□□□□□ -1.34
CDH1-211ENST00000567320 CPNE3O75131 537 aaKnown RBP6.64□□□□□ -1.35
CDH1-211ENST00000567320 GADD45BO75293 160 aaPredicted RBP6.64□□□□□ -1.35
CDH1-211ENST00000567320 ADH5P11766 374 aa6.64□□□□□ -1.35
CDH1-211ENST00000567320 ORC1Q13415 861 aa6.64□□□□□ -1.35
CDH1-211ENST00000567320 PDE3AQ14432 1141 aa6.64□□□□□ -1.35
CDH1-211ENST00000567320 TCF12Q99081 682 aa6.64□□□□□ -1.35
CDH1-211ENST00000567320 METTL22Q9BUU2 404 aaPredicted RBP6.64□□□□□ -1.35
CDH1-211ENST00000567320 CYP26A1O43174 497 aa6.63□□□□□ -1.35
CDH1-211ENST00000567320 NPHS2Q9NP85 383 aa6.63□□□□□ -1.35
CDH1-211ENST00000567320 ACTL7BQ9Y614 415 aa6.63□□□□□ -1.35
CDH1-211ENST00000567320 NFICP08651 508 aa6.62□□□□□ -1.35
CDH1-211ENST00000567320 FOSL1P15407 271 aa6.62□□□□□ -1.35
CDH1-211ENST00000567320 MAP7Q14244 749 aa6.62□□□□□ -1.35
CDH1-211ENST00000567320 DUSP27Q5VZP5 1158 aa6.62□□□□□ -1.35
CDH1-211ENST00000567320 SHISA5Q8N114 240 aa6.62□□□□□ -1.35
CDH1-211ENST00000567320 LGR6Q9HBX8 967 aa6.62□□□□□ -1.35
CDH1-211ENST00000567320 LRRC4CQ9HCJ2 640 aa6.62□□□□□ -1.35
CDH1-211ENST00000567320 PRKAG2Q9UGJ0 569 aa6.62□□□□□ -1.35
CDH1-211ENST00000567320 CTSBP07858 339 aa6.61□□□□□ -1.35
CDH1-211ENST00000567320 ADMP35318 185 aa6.61□□□□□ -1.35
CDH1-211ENST00000567320 TXKP42681 527 aa6.61□□□□□ -1.35
CDH1-211ENST00000567320 ASPAP45381 313 aa6.61□□□□□ -1.35
CDH1-211ENST00000567320 KIAA0319Q5VV43 1072 aa6.61□□□□□ -1.35
CDH1-211ENST00000567320 ZAR1Q86SH2 424 aa6.61□□□□□ -1.35
CDH1-211ENST00000567320 TP53INP2Q8IXH6 220 aa6.61□□□□□ -1.35
CDH1-211ENST00000567320 NRSN2Q9GZP1 204 aa6.61□□□□□ -1.35
CDH1-211ENST00000567320 NIF3L1Q9GZT8 377 aa6.61□□□□□ -1.35
CDH1-211ENST00000567320 DAGLAQ9Y4D2 1042 aa6.61□□□□□ -1.35
CDH1-211ENST00000567320 FAM170BA6NMN3 283 aa6.6□□□□□ -1.35
CDH1-211ENST00000567320 ECEL1O95672 775 aa6.6□□□□□ -1.35
CDH1-211ENST00000567320 B3GALT4O96024 378 aa6.6□□□□□ -1.35
CDH1-211ENST00000567320 ZNF157P51786 506 aaPredicted RBP6.6□□□□□ -1.35
CDH1-211ENST00000567320 ARHGAP4P98171 946 aa6.6□□□□□ -1.35
CDH1-211ENST00000567320 CPSF6Q16630 551 aaKnown RBP eCLIP6.6□□□□□ -1.35
CDH1-211ENST00000567320 ZNF576Q9H609 170 aa6.6□□□□□ -1.35
CDH1-211ENST00000567320 FAM105AQ9NUU6 356 aa6.6□□□□□ -1.35
CDH1-211ENST00000567320 RNF114Q9Y508 228 aa6.6□□□□□ -1.35
CDH1-211ENST00000567320 EZH1Q92800 747 aaPredicted RBP6.59□□□□□ -1.35
CDH1-211ENST00000567320 CCDC74AQ96AQ1 378 aa6.59□□□□□ -1.35
CDH1-211ENST00000567320 TRIM56Q9BRZ2 755 aaKnown RBP6.59□□□□□ -1.35
CDH1-211ENST00000567320 ZC3H12CQ9C0D7 883 aaKnown RBP6.59□□□□□ -1.35
CDH1-211ENST00000567320 SEMA6CQ9H3T2 930 aa6.59□□□□□ -1.35
CDH1-211ENST00000567320 GOLGA2P5Q9HBQ8 144 aa6.59□□□□□ -1.35
CDH1-211ENST00000567320 CCDC39Q9UFE4 941 aa6.59□□□□□ -1.35
CDH1-211ENST00000567320 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.58□□□□□ -1.36
CDH1-211ENST00000567320 EIF1AYO14602 144 aaKnown RBP6.58□□□□□ -1.36
CDH1-211ENST00000567320 AOC2O75106 756 aa6.58□□□□□ -1.36
CDH1-211ENST00000567320 CYP27A1Q02318 531 aa6.58□□□□□ -1.36
CDH1-211ENST00000567320 AP3B2Q13367 1082 aa6.58□□□□□ -1.36
CDH1-211ENST00000567320 ABI1Q8IZP0 508 aa6.58□□□□□ -1.36
CDH1-211ENST00000567320 CCER1Q8TC90 406 aaPredicted RBP6.58□□□□□ -1.36
CDH1-211ENST00000567320 CITED4Q96RK1 184 aa6.58□□□□□ -1.36
CDH1-211ENST00000567320 FAM129BQ96TA1 746 aa6.58□□□□□ -1.36
CDH1-211ENST00000567320 BSDC1Q9NW68 430 aaPredicted RBP6.58□□□□□ -1.36
CDH1-211ENST00000567320 ITPKAP23677 461 aa6.57□□□□□ -1.36
CDH1-211ENST00000567320 PDE4CQ08493 712 aa6.57□□□□□ -1.36
CDH1-211ENST00000567320 ECM1Q16610 540 aa6.57□□□□□ -1.36
CDH1-211ENST00000567320 MSMPQ1L6U9 139 aa6.57□□□□□ -1.36
CDH1-211ENST00000567320 LCE3BQ5TA77 95 aa6.57□□□□□ -1.36
CDH1-211ENST00000567320 DTHD1Q6ZMT9 781 aa6.57□□□□□ -1.36
CDH1-211ENST00000567320 ZNF765Q7L2R6 523 aa6.57□□□□□ -1.36
CDH1-211ENST00000567320 VSIG10LQ86VR7 867 aa6.57□□□□□ -1.36
CDH1-211ENST00000567320 KRTAP1-3Q8IUG1 177 aa6.57□□□□□ -1.36
CDH1-211ENST00000567320 FBXL18Q96ME1 805 aa6.57□□□□□ -1.36
CDH1-211ENST00000567320 PIDD1Q9HB75 910 aa6.57□□□□□ -1.36
CDH1-211ENST00000567320 PPP4R2Q9NY27 417 aa6.57□□□□□ -1.36
CDH1-211ENST00000567320 TRAK1Q9UPV9 953 aa6.57□□□□□ -1.36
CDH1-211ENST00000567320 TMEM238LA0A1B0GVL6 79 aa6.56□□□□□ -1.36
CDH1-211ENST00000567320 SUPT5HO00267 1087 aaKnown RBP6.56□□□□□ -1.36
CDH1-211ENST00000567320 GPR182O15218 404 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 100.1 ms