RNA–Protein interactions for RNA: ENST00000567188.5

CNOT1-211, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 1 (best)

Gene CNOT1, Length 7,830 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-211ENST00000567188 PTF1AQ7RTS3 328 aa6.84□□□□□ -1.31
CNOT1-211ENST00000567188 ZBTB1Q9Y2K1 713 aa6.84□□□□□ -1.31
CNOT1-211ENST00000567188 PTPRCP08575 1304 aa6.84□□□□□ -1.31
CNOT1-211ENST00000567188 VPS72Q15906 364 aa6.84□□□□□ -1.31
CNOT1-211ENST00000567188 C6orf163Q5TEZ5 329 aa6.84□□□□□ -1.31
CNOT1-211ENST00000567188 PXDNQ92626 1479 aa6.84□□□□□ -1.31
CNOT1-211ENST00000567188 H0YIN7 160 aa6.84□□□□□ -1.31
CNOT1-211ENST00000567188 CCDC175P0C221 793 aa6.84□□□□□ -1.31
CNOT1-211ENST00000567188 RALYLQ86SE5 291 aaKnown RBP6.84□□□□□ -1.31
CNOT1-211ENST00000567188 CFAP57Q96MR6 1250 aa6.84□□□□□ -1.31
CNOT1-211ENST00000567188 IL16Q14005 1332 aa6.84□□□□□ -1.31
CNOT1-211ENST00000567188 IGSF1Q8N6C5 1336 aa6.84□□□□□ -1.31
CNOT1-211ENST00000567188 LDHAL6AQ6ZMR3 332 aa6.84□□□□□ -1.31
CNOT1-211ENST00000567188 OTUD6BQ8N6M0 293 aa6.84□□□□□ -1.31
CNOT1-211ENST00000567188 MINDY4BA8MYZ0 360 aa6.84□□□□□ -1.32
CNOT1-211ENST00000567188 CTAGE5O15320 804 aa6.84□□□□□ -1.32
CNOT1-211ENST00000567188 IFIT1P09914 478 aaKnown RBP6.84□□□□□ -1.32
CNOT1-211ENST00000567188 GCKP35557 465 aa6.84□□□□□ -1.32
CNOT1-211ENST00000567188 WHAMMP3Q1A5X7 153 aa6.84□□□□□ -1.32
CNOT1-211ENST00000567188 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.84□□□□□ -1.32
CNOT1-211ENST00000567188 CFAP45Q9UL16 551 aa6.84□□□□□ -1.32
CNOT1-211ENST00000567188 TXLNAP40222 546 aa6.83□□□□□ -1.32
CNOT1-211ENST00000567188 NEDD9Q14511 834 aa6.83□□□□□ -1.32
CNOT1-211ENST00000567188 MIGA1Q8NAN2 632 aa6.83□□□□□ -1.32
CNOT1-211ENST00000567188 TTC36A6NLP5 189 aa6.83□□□□□ -1.32
CNOT1-211ENST00000567188 SLMAPQ14BN4 828 aa6.83□□□□□ -1.32
CNOT1-211ENST00000567188 POTEAQ6S8J7 498 aa6.83□□□□□ -1.32
CNOT1-211ENST00000567188 KSR2Q6VAB6 950 aa6.83□□□□□ -1.32
CNOT1-211ENST00000567188 SH3GL3Q99963 347 aa6.83□□□□□ -1.32
CNOT1-211ENST00000567188 NUP62CLQ9H1M0 184 aa6.83□□□□□ -1.32
CNOT1-211ENST00000567188 TNMDQ9H2S6 317 aa6.83□□□□□ -1.32
CNOT1-211ENST00000567188 WDR78Q5VTH9 848 aa6.83□□□□□ -1.32
CNOT1-211ENST00000567188 FBF1Q8TES7 1133 aa6.83□□□□□ -1.32
CNOT1-211ENST00000567188 USP25Q9UHP3 1055 aa6.83□□□□□ -1.32
CNOT1-211ENST00000567188 TOPAZ1Q8N9V7 1692 aa6.83□□□□□ -1.32
CNOT1-211ENST00000567188 MED1Q15648 1581 aaPredicted RBP6.83□□□□□ -1.32
CNOT1-211ENST00000567188 IBSPP21815 317 aaPredicted RBP6.83□□□□□ -1.32
CNOT1-211ENST00000567188 RPAP2Q8IXW5 612 aaPredicted RBP6.83□□□□□ -1.32
CNOT1-211ENST00000567188 SATB2Q9UPW6 733 aa6.83□□□□□ -1.32
CNOT1-211ENST00000567188 PDCD2Q16342 344 aaPredicted RBP6.83□□□□□ -1.32
CNOT1-211ENST00000567188 MAP3K11Q16584 847 aa6.83□□□□□ -1.32
CNOT1-211ENST00000567188 EFCAB13Q8IY85 973 aa6.83□□□□□ -1.32
CNOT1-211ENST00000567188 MARCH10Q8NA82 808 aaPredicted RBP6.83□□□□□ -1.32
CNOT1-211ENST00000567188 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.83□□□□□ -1.325e-7■■■■□ 21.4
CNOT1-211ENST00000567188 MYCNP04198 464 aaPredicted RBP6.83□□□□□ -1.32
CNOT1-211ENST00000567188 POLR3DP05423 398 aaPredicted RBP6.83□□□□□ -1.32
CNOT1-211ENST00000567188 DESP17661 470 aa6.83□□□□□ -1.32
CNOT1-211ENST00000567188 PSMD7P51665 324 aa6.83□□□□□ -1.32
CNOT1-211ENST00000567188 IFFO1Q0D2I5 559 aa6.83□□□□□ -1.32
CNOT1-211ENST00000567188 PPFIBP1Q86W92 1011 aa6.83□□□□□ -1.32
CNOT1-211ENST00000567188 PLBD2Q8NHP8 589 aa6.83□□□□□ -1.32
CNOT1-211ENST00000567188 FAM210AQ96ND0 272 aa6.83□□□□□ -1.32
CNOT1-211ENST00000567188 PUS7Q96PZ0 661 aaKnown RBP6.83□□□□□ -1.32
CNOT1-211ENST00000567188 BEGAINQ9BUH8 593 aa6.83□□□□□ -1.32
CNOT1-211ENST00000567188 OVOS2A0A0J9YW53 1432 aa6.82□□□□□ -1.32
CNOT1-211ENST00000567188 OVOS2Q6IE36 1432 aa6.82□□□□□ -1.32
CNOT1-211ENST00000567188 PLCH1Q4KWH8 1693 aa6.82□□□□□ -1.32
CNOT1-211ENST00000567188 KIF5CO60282 957 aa6.82□□□□□ -1.32
CNOT1-211ENST00000567188 CDKL5O76039 1030 aa6.82□□□□□ -1.32
CNOT1-211ENST00000567188 CHMP4BP1P59074 171 aa6.82□□□□□ -1.32
CNOT1-211ENST00000567188 CCDC92Q53HC0 331 aaPredicted RBP6.82□□□□□ -1.32
CNOT1-211ENST00000567188 PPEF1O14829 653 aaPredicted RBP6.82□□□□□ -1.32
CNOT1-211ENST00000567188 CEP104O60308 925 aa6.82□□□□□ -1.32
CNOT1-211ENST00000567188 RAB11FIP3O75154 756 aa6.82□□□□□ -1.32
CNOT1-211ENST00000567188 INPP5BP32019 993 aa6.82□□□□□ -1.32
CNOT1-211ENST00000567188 MAP2K1Q02750 393 aaPredicted RBP6.82□□□□□ -1.32
CNOT1-211ENST00000567188 MKRN3Q13064 507 aaKnown RBP6.82□□□□□ -1.32
CNOT1-211ENST00000567188 CCDC181Q5TID7 509 aa6.82□□□□□ -1.32
CNOT1-211ENST00000567188 SEC31BQ9NQW1 1179 aa6.82□□□□□ -1.32
CNOT1-211ENST00000567188 SNW1Q13573 536 aaKnown RBP6.82□□□□□ -1.32
CNOT1-211ENST00000567188 ZNF365Q70YC5 407 aa6.82□□□□□ -1.32
CNOT1-211ENST00000567188 JRKLQ9Y4A0 524 aa6.82□□□□□ -1.32
CNOT1-211ENST00000567188 AATKQ6ZMQ8 1374 aa6.82□□□□□ -1.32
CNOT1-211ENST00000567188 GRM8O00222 908 aa6.82□□□□□ -1.32
CNOT1-211ENST00000567188 SLC3A2P08195 630 aaKnown RBP6.82□□□□□ -1.32
CNOT1-211ENST00000567188 CHRNA5P30532 468 aa6.82□□□□□ -1.32
CNOT1-211ENST00000567188 KRT85P78386 507 aa6.82□□□□□ -1.32
CNOT1-211ENST00000567188 NBPF20Q3BBV1 942 aa6.82□□□□□ -1.32
CNOT1-211ENST00000567188 ZSCAN25Q6NSZ9 544 aa6.82□□□□□ -1.32
CNOT1-211ENST00000567188 NSFL1CQ9UNZ2 370 aaKnown RBP6.82□□□□□ -1.32
CNOT1-211ENST00000567188 COL14A1Q05707 1796 aaKnown RBP6.82□□□□□ -1.32
CNOT1-211ENST00000567188 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.82□□□□□ -1.32
CNOT1-211ENST00000567188 SPC24Q8NBT2 197 aa6.82□□□□□ -1.32
CNOT1-211ENST00000567188 METTL22Q9BUU2 404 aaPredicted RBP6.82□□□□□ -1.32
CNOT1-211ENST00000567188 MAGEB6Q8N7X4 407 aa6.82□□□□□ -1.32
CNOT1-211ENST00000567188 FEZ2Q9UHY8 353 aaPredicted RBP6.82□□□□□ -1.32
CNOT1-211ENST00000567188 ZBTB12Q9Y330 459 aaPredicted RBP6.82□□□□□ -1.32
CNOT1-211ENST00000567188 GCOM1H8Y6P7 765 aaPredicted RBP6.81□□□□□ -1.32
CNOT1-211ENST00000567188 BAG4O95429 457 aaKnown RBP6.81□□□□□ -1.32
CNOT1-211ENST00000567188 MYZAPP0CAP1 466 aa6.81□□□□□ -1.32
CNOT1-211ENST00000567188 SSFA2P28290 1259 aa6.81□□□□□ -1.32
CNOT1-211ENST00000567188 NLRP5P59047 1200 aa6.81□□□□□ -1.32
CNOT1-211ENST00000567188 CCDC129Q6ZRS4 1044 aa6.81□□□□□ -1.32
CNOT1-211ENST00000567188 CCDC65Q8IXS2 484 aa6.81□□□□□ -1.32
CNOT1-211ENST00000567188 EHBP1Q8NDI1 1231 aa6.81□□□□□ -1.32
CNOT1-211ENST00000567188 NLRP3Q96P20 1036 aa6.81□□□□□ -1.32
CNOT1-211ENST00000567188 CLIP2Q9UDT6 1046 aa6.81□□□□□ -1.32
CNOT1-211ENST00000567188 PPP2R5AQ15172 486 aa6.81□□□□□ -1.32
CNOT1-211ENST00000567188 PPFIBP2Q8ND30 876 aa6.81□□□□□ -1.32
CNOT1-211ENST00000567188 HOMER2Q9NSB8 354 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms