RNA–Protein interactions for RNA: ENST00000567071.5

CAPN3-216, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-216ENST00000567071 INHAP05111 366 aa12.67□□□□□ -0.38
CAPN3-216ENST00000567071 FOSL2P15408 326 aa12.67□□□□□ -0.38
CAPN3-216ENST00000567071 MAP3K9P80192 1104 aa12.67□□□□□ -0.38
CAPN3-216ENST00000567071 VGLL4Q14135 290 aa12.67□□□□□ -0.38
CAPN3-216ENST00000567071 RASA3Q14644 834 aa12.67□□□□□ -0.38
CAPN3-216ENST00000567071 PDIA6Q15084 440 aa12.67□□□□□ -0.38
CAPN3-216ENST00000567071 MTMR14Q8NCE2 650 aa12.67□□□□□ -0.38
CAPN3-216ENST00000567071 SEC31BQ9NQW1 1179 aa12.67□□□□□ -0.38
CAPN3-216ENST00000567071 HCN4Q9Y3Q4 1203 aa12.67□□□□□ -0.38
CAPN3-216ENST00000567071 ARIH1Q9Y4X5 557 aaPredicted RBP12.67□□□□□ -0.38
CAPN3-216ENST00000567071 U2AF1L5P0DN76 240 aaPredicted RBP12.66□□□□□ -0.38
CAPN3-216ENST00000567071 CTGFP29279 349 aa12.66□□□□□ -0.38
CAPN3-216ENST00000567071 U2AF1Q01081 240 aaKnown RBP eCLIP12.66□□□□□ -0.38
CAPN3-216ENST00000567071 PROSER3Q2NL68 480 aa12.66□□□□□ -0.38
CAPN3-216ENST00000567071 CC2D1BQ5T0F9 858 aaKnown RBP12.66□□□□□ -0.38
CAPN3-216ENST00000567071 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.66□□□□□ -0.38
CAPN3-216ENST00000567071 DIS3LQ8TF46 1054 aaKnown RBP12.66□□□□□ -0.38
CAPN3-216ENST00000567071 SNX27Q96L92 541 aa12.66□□□□□ -0.38
CAPN3-216ENST00000567071 CRISPLD2Q9H0B8 497 aa12.66□□□□□ -0.38
CAPN3-216ENST00000567071 SPDYE5A6NIY4 337 aa12.65□□□□□ -0.38
CAPN3-216ENST00000567071 GTF2IP78347 998 aa12.65□□□□□ -0.38
CAPN3-216ENST00000567071 ERO1BQ86YB8 467 aa12.65□□□□□ -0.38
CAPN3-216ENST00000567071 PXYLP1Q8TE99 480 aa12.65□□□□□ -0.38
CAPN3-216ENST00000567071 MYLIPQ8WY64 445 aa12.65□□□□□ -0.38
CAPN3-216ENST00000567071 C11orf49Q9H6J7 331 aa12.65□□□□□ -0.38
CAPN3-216ENST00000567071 PAK6Q9NQU5 681 aaPredicted RBP12.65□□□□□ -0.38
CAPN3-216ENST00000567071 MGAMO43451 1857 aa12.65□□□□□ -0.38
CAPN3-216ENST00000567071 CACNA1AO00555 2505 aa12.64□□□□□ -0.39
CAPN3-216ENST00000567071 SPDYE2BA6NHP3 402 aa12.64□□□□□ -0.39
CAPN3-216ENST00000567071 SPDYE6P0CI01 402 aa12.64□□□□□ -0.39
CAPN3-216ENST00000567071 RBM5P52756 815 aaKnown RBP eCLIP12.64□□□□□ -0.39
CAPN3-216ENST00000567071 CFAP100Q494V2 611 aa12.64□□□□□ -0.39
CAPN3-216ENST00000567071 LBHD1Q9BQE6 289 aaPredicted RBP12.64□□□□□ -0.39
CAPN3-216ENST00000567071 C1QTNF1Q9BXJ1 281 aa12.64□□□□□ -0.39
CAPN3-216ENST00000567071 ZNF316A6NFI3 1004 aaPredicted RBP12.63□□□□□ -0.39
CAPN3-216ENST00000567071 ATP5J2-PTCD1G3V325 749 aa12.63□□□□□ -0.39
CAPN3-216ENST00000567071 ELNP15502 786 aa12.63□□□□□ -0.39
CAPN3-216ENST00000567071 MDM2Q00987 491 aaPredicted RBP12.63□□□□□ -0.39
CAPN3-216ENST00000567071 IL27Q8NEV9 243 aa12.63□□□□□ -0.39
CAPN3-216ENST00000567071 PLBD2Q8NHP8 589 aa12.63□□□□□ -0.39
CAPN3-216ENST00000567071 CDC5LQ99459 802 aaKnown RBP12.63□□□□□ -0.39
CAPN3-216ENST00000567071 ISCA1Q9BUE6 129 aa12.63□□□□□ -0.39
CAPN3-216ENST00000567071 SEMA6BQ9H3T3 888 aa12.63□□□□□ -0.39
CAPN3-216ENST00000567071 COL2A1P02458 1487 aaPredicted RBP12.63□□□□□ -0.39
CAPN3-216ENST00000567071 CCT4P50991 539 aaKnown RBP12.62□□□□□ -0.39
CAPN3-216ENST00000567071 ANKRD23Q86SG2 305 aa12.62□□□□□ -0.39
CAPN3-216ENST00000567071 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.62□□□□□ -0.39
CAPN3-216ENST00000567071 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.62□□□□□ -0.39
CAPN3-216ENST00000567071 TSPYL4Q9UJ04 414 aa12.62□□□□□ -0.39
CAPN3-216ENST00000567071 TAOK2Q9UL54 1235 aa12.62□□□□□ -0.39
CAPN3-216ENST00000567071 GABRQQ9UN88 632 aa12.62□□□□□ -0.39
CAPN3-216ENST00000567071 PDHXO00330 501 aa12.61□□□□□ -0.39
CAPN3-216ENST00000567071 TNNI2P48788 182 aa12.61□□□□□ -0.39
CAPN3-216ENST00000567071 FLT3LGP49771 235 aa12.61□□□□□ -0.39
CAPN3-216ENST00000567071 PPIL2Q13356 520 aa12.61□□□□□ -0.39
CAPN3-216ENST00000567071 IRF5Q13568 498 aa12.61□□□□□ -0.39
CAPN3-216ENST00000567071 PARK7Q99497 189 aaKnown RBP12.61□□□□□ -0.39
CAPN3-216ENST00000567071 DDX60LQ5H9U9 1706 aaKnown RBP12.61□□□□□ -0.39
CAPN3-216ENST00000567071 DLG5Q8TDM6 1919 aa12.6□□□□□ -0.39
CAPN3-216ENST00000567071 F8W031 263 aaPredicted RBP12.6□□□□□ -0.39
CAPN3-216ENST00000567071 IRF6O14896 467 aa12.6□□□□□ -0.39
CAPN3-216ENST00000567071 ZBTB38Q8NAP3 1195 aaPredicted RBP12.6□□□□□ -0.39
CAPN3-216ENST00000567071 PRMT6Q96LA8 375 aaPredicted RBP12.6□□□□□ -0.39
CAPN3-216ENST00000567071 CCDC85AQ96PX6 553 aaPredicted RBP12.6□□□□□ -0.39
CAPN3-216ENST00000567071 LEMD3Q9Y2U8 911 aa12.6□□□□□ -0.39
CAPN3-216ENST00000567071 TNPO2O14787 897 aaKnown RBP12.59□□□□□ -0.39
CAPN3-216ENST00000567071 PDE8AO60658 829 aa12.59□□□□□ -0.39
CAPN3-216ENST00000567071 CNGB1Q14028 1251 aaPredicted RBP12.59□□□□□ -0.39
CAPN3-216ENST00000567071 HOOK2Q96ED9 719 aa12.59□□□□□ -0.39
CAPN3-216ENST00000567071 MINPP1Q9UNW1 487 aa12.59□□□□□ -0.39
CAPN3-216ENST00000567071 MUC6Q6W4X9 2439 aa12.58□□□□□ -0.4
CAPN3-216ENST00000567071 KCNJ4P48050 445 aa12.58□□□□□ -0.4
CAPN3-216ENST00000567071 TRIM28Q13263 835 aaKnown RBP12.58□□□□□ -0.4
CAPN3-216ENST00000567071 ATXN2LQ8WWM7 1075 aaKnown RBP12.58□□□□□ -0.4
CAPN3-216ENST00000567071 COA7Q96BR5 231 aa12.58□□□□□ -0.4
CAPN3-216ENST00000567071 WRNIP1Q96S55 665 aa12.58□□□□□ -0.4
CAPN3-216ENST00000567071 UHRF1Q96T88 793 aaPredicted RBP12.58□□□□□ -0.4
CAPN3-216ENST00000567071 BSDC1Q9NW68 430 aaPredicted RBP12.58□□□□□ -0.4
CAPN3-216ENST00000567071 PCDHAC2Q9Y5I4 1007 aa12.58□□□□□ -0.4
CAPN3-216ENST00000567071 SNCAIPQ9Y6H5 919 aa12.58□□□□□ -0.4
CAPN3-216ENST00000567071 SPEF2Q9C093 1822 aa12.58□□□□□ -0.4
CAPN3-216ENST00000567071 PPATQ06203 517 aa12.57□□□□□ -0.4
CAPN3-216ENST00000567071 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.57□□□□□ -0.4
CAPN3-216ENST00000567071 ADAMTS19Q8TE59 1207 aa12.57□□□□□ -0.4
CAPN3-216ENST00000567071 HMX1Q9NP08 348 aaPredicted RBP12.57□□□□□ -0.4
CAPN3-216ENST00000567071 ZNF70Q9UC06 446 aaPredicted RBP12.57□□□□□ -0.4
CAPN3-216ENST00000567071 PRKAG2Q9UGJ0 569 aa12.57□□□□□ -0.4
CAPN3-216ENST00000567071 ARAP2Q8WZ64 1704 aa12.57□□□□□ -0.4
CAPN3-216ENST00000567071 HMGCRP04035 888 aa12.56□□□□□ -0.4
CAPN3-216ENST00000567071 BCRP11274 1271 aa12.56□□□□□ -0.4
CAPN3-216ENST00000567071 SPDYE2Q495Y8 402 aa12.56□□□□□ -0.4
CAPN3-216ENST00000567071 TXNRD3Q86VQ6 643 aa12.56□□□□□ -0.4
CAPN3-216ENST00000567071 TCP10L2B9ZVM9 353 aa12.55□□□□□ -0.4
CAPN3-216ENST00000567071 FKBP1AP62942 108 aaKnown RBP12.55□□□□□ -0.4
CAPN3-216ENST00000567071 SMAD3P84022 425 aaKnown RBP12.55□□□□□ -0.4
CAPN3-216ENST00000567071 ALYREFQ86V81 257 aaKnown RBP12.55□□□□□ -0.4
CAPN3-216ENST00000567071 CERS5Q8N5B7 392 aa12.55□□□□□ -0.4
CAPN3-216ENST00000567071 ZKSCAN4Q969J2 545 aaPredicted RBP12.55□□□□□ -0.4
CAPN3-216ENST00000567071 TEPSINQ96N21 525 aa12.55□□□□□ -0.4
CAPN3-216ENST00000567071 TMEM39BQ9GZU3 492 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms